Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0970700-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:42826262:42828667:-1 gene:Os01g0970700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M48, Ste24p family protein. (Os01t0970700-01);Similar to Peptidase M48, Ste24p. (Os01t0970700-02)
Sequence

ATGGCTGCGGCGGCGGCGGCTGCTTCTGCTCCCCGCCTCCTCCTGCCGCCGGCCGCCTCC
ACCTTCCCACACCAGCACGAGCACGTCCGCCGCAACTGGCACCGGCCCCGCCGCCAGGTC
ATCTCTGCCCGCGCCGGCGCCTCCGTCGCCGCCCGGGGCCTTGATGCAGACGACTTCCGC
CATCCGCTGGACAAGCAGAACACACTGCTGCTGAGAGCAGTTCCAGGGCTTAATGATATG
GGCAAGGCTTTGCTAGGACCAGTTTCTGAGCAAGTTATGGTACTTCAGAACATTGGATCG
TCTGTGCTAGTCTCTGAAAACCAGCTTTCAGATCTTCATCAGATCTTGACCGAGGCAGCA
AAACTATTGAACACAGACGCTCCTGACTTGTACATTCGGCAGAACCCTGTTCCTAATGCT
TACACCTTAGCGATCAGTGGCAAAAAGCCATTCATAGTTGTTCATACAAGCCTTGTGGAG
CTGCTCACTAGAAAAGAACTGCAGGCTGTGTTGGCTCATGAACTGGGACACCTCAAGTGT
GACCATGGCGTGTGGCTTACATTTGCCAACATACTGACAATGGGAGCATACTCTGTCCCT
GGATTTGGCATGGTTGCTGGGTTTCTGGAAGAGCAGCTCTACAGGTGGCTCCGGGCTGCA
GAGCTGACTTGTGATCGAGCGGCTCTTCTTGTAGTGCAGGACCCCAAGGTTGTGATATCT
GTGCTGATGAAACTGGCCGGAGGGTGCCCGTCGCTTGCGGACCAGCTGAACGTGGACGCC
TTCCTGGAGCAAGCTCGCTCCTACGACAAAGCTGCGTCAAACCCCGTCGGCTGGAACGCT
CAGACGAGAGAGCTGTCGCATCCTCTGCCGGTGATGCGAGCCCGCGAGATCGACGAGTGG
TCCAGGAGCCGAGAGTACAAGACGGTGCAGCAGAAGGTCATTCAGCTCCAGCTCAATGAT
CACGATGCAAGCTAG

Peptide Sequence

PEP ID

Os01t0970700-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:42826262:42828667:-1 gene:Os01g0970700 transcript:Os01t0970700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M48, Ste24p family protein. (Os01t0970700-01);Similar to Peptidase M48, Ste24p. (Os01t0970700-02)
Sequence

MAAAAAAASAPRLLLPPAASTFPHQHEHVRRNWHRPRRQVISARAGASVAARGLDADDFR
HPLDKQNTLLLRAVPGLNDMGKALLGPVSEQVMVLQNIGSSVLVSENQLSDLHQILTEAA
KLLNTDAPDLYIRQNPVPNAYTLAISGKKPFIVVHTSLVELLTRKELQAVLAHELGHLKC
DHGVWLTFANILTMGAYSVPGFGMVAGFLEEQLYRWLRAAELTCDRAALLVVQDPKVVIS
VLMKLAGGCPSLADQLNVDAFLEQARSYDKAASNPVGWNAQTRELSHPLPVMRAREIDEW
SRSREYKTVQQKVIQLQLNDHDAS

Transcript Sequence

Transcript ID

Os01t0970700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42826262:42828667:-1 gene:Os01g0970700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M48, Ste24p family protein. (Os01t0970700-01);Similar to Peptidase M48, Ste24p. (Os01t0970700-02)
Sequence

GTTTACTTTGCTTAATTTGCTTGCCCTCATCCTCATGGCTGCGGCGGCGGCGGCTGCTTC
TGCTCCCCGCCTCCTCCTGCCGCCGGCCGCCTCCACCTTCCCACACCAGCACGAGCACGT
CCGCCGCAACTGGCACCGGCCCCGCCGCCAGGTCATCTCTGCCCGCGCCGGCGCCTCCGT
CGCCGCCCGGGGCCTTGATGCAGACGACTTCCGCCATCCGCTGGACAAGCAGAACACACT
GCTGCTGAGAGCAGTTCCAGGGCTTAATGATATGGGCAAGGCTTTGCTAGGACCAGTTTC
TGAGCAAGTTATGGTACTTCAGAACATTGGATCGTCTGTGCTAGTCTCTGAAAACCAGCT
TTCAGATCTTCATCAGATCTTGACCGAGGCAGCAAAACTATTGAACACAGACGCTCCTGA
CTTGTACATTCGGCAGAACCCTGTTCCTAATGCTTACACCTTAGCGATCAGTGGCAAAAA
GCCATTCATAGTTGTTCATACAAGCCTTGTGGAGCTGCTCACTAGAAAAGAACTGCAGGC
TGTGTTGGCTCATGAACTGGGACACCTCAAGTGTGACCATGGCGTGTGGCTTACATTTGC
CAACATACTGACAATGGGAGCATACTCTGTCCCTGGATTTGGCATGGTTGCTGGGTTTCT
GGAAGAGCAGCTCTACAGGTGGCTCCGGGCTGCAGAGCTGACTTGTGATCGAGCGGCTCT
TCTTGTAGTGCAGGACCCCAAGGTTGTGATATCTGTGCTGATGAAACTGGCCGGAGGGTG
CCCGTCGCTTGCGGACCAGCTGAACGTGGACGCCTTCCTGGAGCAAGCTCGCTCCTACGA
CAAAGCTGCGTCAAACCCCGTCGGCTGGAACGCTCAGACGAGAGAGCTGTCGCATCCTCT
GCCGGTGATGCGAGCCCGCGAGATCGACGAGTGGTCCAGGAGCCGAGAGTACAAGACGGT
GCAGCAGAAGGTCATTCAGCTCCAGCTCAATGATCACGATGCAAGCTAGCTAAGCTGCAG
GCTGGACCGGCCTGATCAACTCACTTCACTGTACAAGTAGAAGTAGAAATGGAATCTAGC
TGTATATGTTTGTACATGGATGGAACGGAACCGAACTGTTGGAGGTC