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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0969000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:42736008:42737917:-1 gene:Os01g0969000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chloroplast outer envelope 24 kD protein. (Os01t0969000-01)
Sequence

ATGGGCAACGCCGGGAGCTCGCCGGAGCAGGCCGCCGGCAATAATAAGGAGGACGCGGAG
GCCCGCCGCCAGCCGCCGTCCACCGTGCGATTCTACCCCAGCGCCGACCAGCCCAAGGCC
AGGCAGCCGCCGCCCATCAAGCTGGAGGAGGAGGACGTGCCCCCTCCGCCCGTCGCCGAC
GAGGAGATGGCCCCCCGCAACCTCTGGCAGGTTTATGCTCTTGGAGCGTTTATTGTGTTG
AGATGGGCCTGGGTTAAGTGGAAAGAAAGCAAGGAAAGAGATGATTCGCCTGATGGCCGA
TCCCCGGACGGGTCTTCTTAG

Peptide Sequence

PEP ID

Os01t0969000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:42736008:42737917:-1 gene:Os01g0969000 transcript:Os01t0969000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chloroplast outer envelope 24 kD protein. (Os01t0969000-01)
Sequence

MGNAGSSPEQAAGNNKEDAEARRQPPSTVRFYPSADQPKARQPPPIKLEEEDVPPPPVAD
EEMAPRNLWQVYALGAFIVLRWAWVKWKESKERDDSPDGRSPDGSS

Transcript Sequence

Transcript ID

Os01t0969000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42736008:42737917:-1 gene:Os01g0969000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chloroplast outer envelope 24 kD protein. (Os01t0969000-01)
Sequence

AGTCGAGTGAGTCTCTTAGCGAGGAGAGACGAGGCGAGAGGAGAGGAGAGGCGCCGCCGC
GGCGAGGAGAGCGAGAATCGGAAGGCGATGGGCAACGCCGGGAGCTCGCCGGAGCAGGCC
GCCGGCAATAATAAGGAGGACGCGGAGGCCCGCCGCCAGCCGCCGTCCACCGTGCGATTC
TACCCCAGCGCCGACCAGCCCAAGGCCAGGCAGCCGCCGCCCATCAAGCTGGAGGAGGAG
GACGTGCCCCCTCCGCCCGTCGCCGACGAGGAGATGGCCCCCCGCAACCTCTGGCAGGTT
TATGCTCTTGGAGCGTTTATTGTGTTGAGATGGGCCTGGGTTAAGTGGAAAGAAAGCAAG
GAAAGAGATGATTCGCCTGATGGCCGATCCCCGGACGGGTCTTCTTAGTTTGCTCCAGAA
AGCTTTAGTCTCTGCTTTAAATCCTAAGAAGATAAAGATGTTGTGCGATGATGGTGCACC
TCTCTAATCTATGTCCATCTGATTAGAGTTTTTCTTCCCCGTCATTGTTGCCTTGTGTTT
GGATTCTGTATTTGCCCATCATGCGCAAGTGACTTCCTTTTCCTTGCTGTCATGTTAGAA
CTTGCAATATCTTTAAGTGAAAGGCTTGTAGTAAAAGTAAAAGACCTCTTTTAATACTAC
CATCCATGATCCAACTGC