Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0967800-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:42685948:42689025:1 gene:Os01g0967800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0967800-01);Hypothetical conserved gene. (Os01t0967800-02)
Sequence

CGTAAAGAACCTGCTACAAACGCTGAGAATAATGCTGTTCCTGTCGCAGAGAACAATGAT
TTGCAAGAAGCGGATGAGGCAATCAAAAGGCTGAATGAATTGGGCTTGGGAGAGAATATC
AGCTCTGAGGAGTTCCTTACATACATTGACCAGCTGAATGAACAACCTAAAATCGATACT
TCCATTGAACTGGACGATGCACAGGTCACTACCCTCTATTTTCAGCATGCGCGCTATCGC
GTCAGATACTATAAGCACTTGTCACAACAACCTAATACTGAGTTGGTAGAGGATTCTTAC
CACATGAAACTTGTTGGGGAAGATGAACTCTCCGATGAGTTTATTCGCGAGATGGAATTT
TTTATGCGTTTCGAGGAAGATGGCACATTTGATTGGTATTTCTACCCTGATTACTGCTGG
CTTGCTGCTCTGAACGACTACCAACGTCTAGTACCGATAAACTGTGTTGGTGAGGAGTAC
GCTTATTGGGACGACTACCGCGGCTATTTTAATAGCTATCATACTGAATTGCAATATCTC
GACTTCTGCAAGGCATTGTCGAAGGAACTTAAGTGGATGGAAGACTATGTCCTGAATAAA
CTGCCATCTTCTAAGTGGGGAAGAATATGCAGCAGAGGAGCCTACCAAGCAATTAAGATT
GCCACCCGCTTTTCCAAGATCACTGCTGCTTTGGCCTATAATGCCTACTATCACATGCGC
TTTTATGTTGCTTATTGCAAGGACATGGATAGCTTGTACTTTGAGATTTGGCAGCGGGTC
AACATGCAAAAAAAGAGTTTCAGAGATTCTTTGGAGGAAGTCTACAACCTCAACAAGTTC
CCTTCACGGCAAGATAAAATGAAGGATGCATTGGAGAATAACTGTTCCCACATGGAAACT
GTGTTTCATGTTTGCACGGCAAGTGTTACCAGTGAAATTGCGGAGGATAAAGCTCTGGAG
CTGATTGCAAAGGCAGTTGAAAGTCGGATGAACAAAGCAAAATTCTACGAGCAGTATATC
GAAAAGAAGATAGATATTGCCCAAGCTATTGGATTGATTTCCACGGATGGGACTGAAGCA
ACATGA

Peptide Sequence

PEP ID

Os01t0967800-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:42685948:42689025:1 gene:Os01g0967800 transcript:Os01t0967800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0967800-01);Hypothetical conserved gene. (Os01t0967800-02)
Sequence

RKEPATNAENNAVPVAENNDLQEADEAIKRLNELGLGENISSEEFLTYIDQLNEQPKIDT
SIELDDAQVTTLYFQHARYRVRYYKHLSQQPNTELVEDSYHMKLVGEDELSDEFIREMEF
FMRFEEDGTFDWYFYPDYCWLAALNDYQRLVPINCVGEEYAYWDDYRGYFNSYHTELQYL
DFCKALSKELKWMEDYVLNKLPSSKWGRICSRGAYQAIKIATRFSKITAALAYNAYYHMR
FYVAYCKDMDSLYFEIWQRVNMQKKSFRDSLEEVYNLNKFPSRQDKMKDALENNCSHMET
VFHVCTASVTSEIAEDKALELIAKAVESRMNKAKFYEQYIEKKIDIAQAIGLISTDGTEA
T

Transcript Sequence

Transcript ID

Os01t0967800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42685948:42689025:1 gene:Os01g0967800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0967800-01);Hypothetical conserved gene. (Os01t0967800-02)
Sequence

TCGTAAAGAACCTGCTACAAACGCTGAGAATAATGCTGTTCCTGTCGCAGAGAACAATGA
TTTGCAAGAAGCGGATGAGGCAATCAAAAGGCTGAATGAATTGGGCTTGGGAGAGAATAT
CAGCTCTGAGGAGTTCCTTACATACATTGACCAGCTGAATGAACAACCTAAAATCGATAC
TTCCATTGAACTGGACGATGCACAGGTCACTACCCTCTATTTTCAGCATGCGCGCTATCG
CGTCAGATACTATAAGCACTTGTCACAACAACCTAATACTGAGTTGGTAGAGGATTCTTA
CCACATGAAACTTGTTGGGGAAGATGAACTCTCCGATGAGTTTATTCGCGAGATGGAATT
TTTTATGCGTTTCGAGGAAGATGGCACATTTGATTGGTATTTCTACCCTGATTACTGCTG
GCTTGCTGCTCTGAACGACTACCAACGTCTAGTACCGATAAACTGTGTTGGTGAGGAGTA
CGCTTATTGGGACGACTACCGCGGCTATTTTAATAGCTATCATACTGAATTGCAATATCT
CGACTTCTGCAAGGCATTGTCGAAGGAACTTAAGTGGATGGAAGACTATGTCCTGAATAA
ACTGCCATCTTCTAAGTGGGGAAGAATATGCAGCAGAGGAGCCTACCAAGCAATTAAGAT
TGCCACCCGCTTTTCCAAGATCACTGCTGCTTTGGCCTATAATGCCTACTATCACATGCG
CTTTTATGTTGCTTATTGCAAGGACATGGATAGCTTGTACTTTGAGATTTGGCAGCGGGT
CAACATGCAAAAAAAGAGTTTCAGAGATTCTTTGGAGGAAGTCTACAACCTCAACAAGTT
CCCTTCACGGCAAGATAAAATGAAGGATGCATTGGAGAATAACTGTTCCCACATGGAAAC
TGTGTTTCATGTTTGCACGGCAAGTGTTACCAGTGAAATTGCGGAGGATAAAGCTCTGGA
GCTGATTGCAAAGGCAGTTGAAAGTCGGATGAACAAAGCAAAATTCTACGAGCAGTATAT
CGAAAAGAAGATAGATATTGCCCAAGCTATTGGATTGATTTCCACGGATGGGACTGAAGC
AACATGATGTGCTTAACTTATAGTGTTTTTTTTTGGGAGGGCTTAGCTTACCTTTCTTTT
TATATCAGTATCAGTAGATGTCGATGCCCCGCCAGCGCCTGCAGAAATAAAGATCCCGAA
CCAATGTTTTTTTAGCTGTTATGATTAATTCGGTTTCCAGGCTCCGGCCCGATCGAAAGC
ATTGTAATTGATAATGTTATGTGCGATACATTTAGCGTACGTTGC