Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0967100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:42646061:42653875:1 gene:Os01g0967100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 15 domain containing protein. (Os01t0967100-01)
Sequence	ATGGCGGGGAGCTCGAGGCCCGACCTCGGCGGTGGCGGGAGCTTCCGCGAGGGCCCGCAG CTCTCCGGGGCGGGAACCCCGAGGGCGCTGGCGGAGCCGCCCCCGCTGGCGCAGTACCTC CCCCTGGAGTCGTTCCCCGTCGGCGACCACAAGCAGTCGCGCGCCACGGAGCTTCGGCGG GTGCTCGGCGTCACCGTGGAGGCGGAGCAGTCGTTCGGGCTGGTGCAGACCAAGCCACTC CCTTCCATAGCGTCCGAGGAACTCAAGCGGATCCGTGGGGGCGTCGTGGAGTCGTCGGCC AAAGCCAAGGAGAAAACCAAGTCGCTGCAGGATTCTATTCAGAAGCTGGATAAGTACAGG AACGTTGTCACGCGGAGGCGGCAGAGGAGCGAAGGAGGTGCGACTGAGAGGTCATCAGGG AGTGGGTCGGGTTCCCTGAGGATGGGGGCTCAGAACAGTATGGATAATCCTGGCCAGCGG CTGGAGGAGAGGGCTAAGAGTGCGACCACAAGCAAGCGTGTCCGCTCATCGCTAGCAGCA GATGCACGGTTAGAAGGGCGTGGTAATGTTCCTACAAGGCAAGGTCCTCTGGCGGACAGT GAGAAAAGTTCCTCTTTGGAGAAGGAAAAAAACTCTTTGAGGAATGTCAATGCTGCATCA GGGTTTTCTGAAGACAAATTACGGGGCCTAGCTCCTGGAGGTGAAGGTTGGGAGAAAAAG TTGAAACGTAAGCGCTCTGTTGGAACTATGCTGAACAGAGGCAATGACGTAGACCGAGAT GTTAAACCGTTGGTTCAACATAGACCAAACAATGAAGCTCGCATGCGATCTAGTGATGGT CTTCCAATTAGGCATGGAGCTTCTGCTGGAGCATTAGGAGGAAGCAAGATGGATGGAGGT TCTCAACAGAGTAATGCAGGTTCCCGTTATCTACTGAAGGCAGACATGGACTCCACTTCT CTTCCAAATGAAAGAAGAGAGCGCCATTTAGGGATAGACAAAGAACGGGTTTTGGTGAAA GGAAACAAGGCAAATACCTCTGAGGATATGCAACCTGGAACTTTAAATCCTCTGACTAAG GGCAAGGCATGCAGAGCACCAAGAACTAGTTCCCTTGTTGTTATGAATTCATCATCCACT CTTCAGCGCTCATCTGGAGGAATCGATGAATGGGAAGAAACACCATCCACCAATAAATCC TCTCCTTTGGGAGGCACTGCAAATCGCAAGCGTCCCATGACTGCAAGTGGGTCTTCACCT CCTGTTGCTTGGGTGGGTCAACGTCCACAGAAAATGTCACGGACAAGAAGAGCAAATGTT GTTTCCCCAGTCTCAAATTTTGATGAAGGCCTATCTGAAGGATCACCACTTGATGCTGCT GTTAGACCAGCGGTAGAGTCACCTGGCCTTTTGCTTCCAAGGGGTGTAGCTAGTAATAAT TCACAAGTTACACCAAGAATGGATAATATTTCATCTCCAGCTGGTCTGTCAGAAAGCGAA GACTCTGCTGCTACGGAAAATAAGAACAAGGATAAAATCAGTAATAGTGGTGATTTTGAG AACGAGGGCGCAAATTCAGCCCATAATTCAGCAGACTTAATTATCTCATCGAAGAAAAGC AGGATACTGTTAAAAGAAGAGCTTGAAGATGGAAGTATTCGACGGCAAGGGAGGAGCGGA AGAAACACTATGCATGTTAAAGGGTGTGCATCCATGCCAAGAGAGAAGTTGGACAGCCCA GAAACAAGAAAGCTGCTGAAGAGCGGAAGACCTGTATCTGAAAAGAATGAAAGTAAGTTG GGCCGCCCTCCAACGAAGAAGGGTTCAGACCGCAAAGCATCATCTCGACACTCGGAGATC CTAAATTGTGGGTTAACAGATATATCAGGTGAATCAGAAGATGACCGGGAAGAGCTTCTA GCTGCTGCAAATGCTGCGCGCAGTGCCATTGTTAATGCATATGCTGGTCCATTTTGGAAG AAAATAGAACCGATGCTTACTTTCATCAGCTCTGAAGATTTATCTTTCTTAAAGCACCAG ATTACATTTTTGGAAGAGCTTGAGATGGGCATGTCTAAGTCATCCGATGAACATAATTTG AACACATCAACTAACTACAGTGGGCCATTATCAATGGGTCAAAATTCATCTCTGCCTCAG TCAAATTCATGTGTGTCATTGGAGCAAAGCGAAGCAAATGGACCCAGGACAAGAGAATCT ATTGATATTTTGTCTCCCAATGATGAAAACACTGCATCTCAAAAGACACATGCAGAAGAA TTGTTTGGTGGAATGGCTTCCTTGACACACAAACTCTTCTCTGCTTTTATTGTAGAAGAT GGTGATAATTCTTCTGAATGCAATGGAGGAGATATACTTCTTGAGTTCTCAAATGACTTC CTTCCTTATGCTGCCAACATGAACTTAGAAAATGATTTTGAAGCTAGTGCAGTAAAATCC AACTTTGGATCAAGTCCTGATTTCAAGCACTCAAACCATAGCTCAGTGCATAACAGCATG TCCAATGGTTTTACAGCTTCCAGCAATTTGAGGGCCTCATATAGTCCAAATTCAATTTGC AGTGAGAATGCATCGGATGCGATAAAATTTGCAGTATATCCAGAAAATGGTGGTTTTCAT GAATTTGTGCCACATATCTCACAACAGTATCAAAACTGTGCAAAAAGTACGCCTTTACCA CCATATGAATATCAGTATGACCAGTTGCCTGTGCATGACAGAGCTTTAATCGAGCTGCAC AGTATTGACCTTTGTCCAGAGATGCCAAAGCTGGATGATGGAGAGGATGAGGACATTGAT AAAGTTATTACGGAGCTGCAGAAAAGACTGTTTGAGCAGGTGAATCAAAAGAAGTGCCAA TTACATAAGTTGGACAAAGCAATCCGTGATACTAAAAATATGGAGGAGAGGAGTCTGGAG CAACATGCAATGAACAAGCTAGTGGAGATGGCATACAAAAAACTGATGGGTGGCCGTGGT AGTTCTAGTCATAAGGGTGGTCTCAATAAAGCTGCTAATAAGGCTGCAAAACAAGTTGCA TTGGCTTTTGCCAAGAGAACACTTGCCCGGTGCCAGAAATTTGAGGAAACAGAGAAAAGC TGCTTCAGAGAGCCTTTCCTTTGGAATGTGCTGTCTGCACCTTTGCCAAAGAATGATGCA ATAGATGGTGGTCTCCCAGGATCTGCAGATAGGCCAAAGCTTTTAAAGCTTGACAGAAGT CCATTGAGCCAAGGTACTACAAAATGGAAAAAGAGTGACCGAGAAAGGGATCAAAACAGA GACGCGTCTTTGAAGAATTCTAATTCGAAATCAGGACGCAATTCGTCCGGCAATGCAAGG AGTGAGCGTAAAACTAAGATAAAACCGAAGCAAAAGCTAGCACAGTTGTCGACATCTGGA AATGTTCTTGGAAGAGTTACGGAGCCATCAAATTTCGCAGCACCCGGCCAGAGAGAATCC CATGATTGGACGAGTACGTCGAGCACAAGACCTACTCAACCAGTCAGAAACAGCGCAGCT ACTGTTGCCCAGGATACCTTAGATGCTCCATTGGCAAATTTGCCTGCAATAGATCCAATG GACATCTTGGACGTGCCTGAAGGTAACGACATCAGTTCGTGGTTTACTGATGGTCTTGAT GATTCCTTACAAGATTTTGACTTCTCCGGAGGCCTAGAAATCCCAGATGACGATCTTACC CAACTGGGATTCATGTAA

Peptide Sequence

PEP ID	Os01t0967100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:42646061:42653875:1 gene:Os01g0967100 transcript:Os01t0967100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 15 domain containing protein. (Os01t0967100-01)
Sequence	MAGSSRPDLGGGGSFREGPQLSGAGTPRALAEPPPLAQYLPLESFPVGDHKQSRATELRR VLGVTVEAEQSFGLVQTKPLPSIASEELKRIRGGVVESSAKAKEKTKSLQDSIQKLDKYR NVVTRRRQRSEGGATERSSGSGSGSLRMGAQNSMDNPGQRLEERAKSATTSKRVRSSLAA DARLEGRGNVPTRQGPLADSEKSSSLEKEKNSLRNVNAASGFSEDKLRGLAPGGEGWEKK LKRKRSVGTMLNRGNDVDRDVKPLVQHRPNNEARMRSSDGLPIRHGASAGALGGSKMDGG SQQSNAGSRYLLKADMDSTSLPNERRERHLGIDKERVLVKGNKANTSEDMQPGTLNPLTK GKACRAPRTSSLVVMNSSSTLQRSSGGIDEWEETPSTNKSSPLGGTANRKRPMTASGSSP PVAWVGQRPQKMSRTRRANVVSPVSNFDEGLSEGSPLDAAVRPAVESPGLLLPRGVASNN SQVTPRMDNISSPAGLSESEDSAATENKNKDKISNSGDFENEGANSAHNSADLIISSKKS RILLKEELEDGSIRRQGRSGRNTMHVKGCASMPREKLDSPETRKLLKSGRPVSEKNESKL GRPPTKKGSDRKASSRHSEILNCGLTDISGESEDDREELLAAANAARSAIVNAYAGPFWK KIEPMLTFISSEDLSFLKHQITFLEELEMGMSKSSDEHNLNTSTNYSGPLSMGQNSSLPQ SNSCVSLEQSEANGPRTRESIDILSPNDENTASQKTHAEELFGGMASLTHKLFSAFIVED GDNSSECNGGDILLEFSNDFLPYAANMNLENDFEASAVKSNFGSSPDFKHSNHSSVHNSM SNGFTASSNLRASYSPNSICSENASDAIKFAVYPENGGFHEFVPHISQQYQNCAKSTPLP PYEYQYDQLPVHDRALIELHSIDLCPEMPKLDDGEDEDIDKVITELQKRLFEQVNQKKCQ LHKLDKAIRDTKNMEERSLEQHAMNKLVEMAYKKLMGGRGSSSHKGGLNKAANKAAKQVA LAFAKRTLARCQKFEETEKSCFREPFLWNVLSAPLPKNDAIDGGLPGSADRPKLLKLDRS PLSQGTTKWKKSDRERDQNRDASLKNSNSKSGRNSSGNARSERKTKIKPKQKLAQLSTSG NVLGRVTEPSNFAAPGQRESHDWTSTSSTRPTQPVRNSAATVAQDTLDAPLANLPAIDPM DILDVPEGNDISSWFTDGLDDSLQDFDFSGGLEIPDDDLTQLGFM

Transcript Sequence

Transcript ID	Os01t0967100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42646061:42653875:1 gene:Os01g0967100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 15 domain containing protein. (Os01t0967100-01)
Sequence	CCCGCTTTCTCATTTTTTTTTTCTTTTTGCCGACTTCCCCCCTCAGCCGCCACACGCCCC CTCGCCGCCGGCGACCTCGAGTTCTAGGGTTAGGGTTTTTGCCCCGGCTCGCCAATCCAC TATCGCCCAAGGCTTCGGCCCCAATTCGACGCCCGCGGGTTCAATTCCGAGCGCTCCCAA GTCGAATTGTCCGCCTCCACCGGTGGAATTCCCATGCCTCTGAGATAAGGATTTTGGGGG AGACGCGGGGTGAGCCGGGCGGCCATGGCGGGGAGCTCGAGGCCCGACCTCGGCGGTGGC GGGAGCTTCCGCGAGGGCCCGCAGCTCTCCGGGGCGGGAACCCCGAGGGCGCTGGCGGAG CCGCCCCCGCTGGCGCAGTACCTCCCCCTGGAGTCGTTCCCCGTCGGCGACCACAAGCAG TCGCGCGCCACGGAGCTTCGGCGGGTGCTCGGCGTCACCGTGGAGGCGGAGCAGTCGTTC GGGCTGGTGCAGACCAAGCCACTCCCTTCCATAGCGTCCGAGGAACTCAAGCGGATCCGT GGGGGCGTCGTGGAGTCGTCGGCCAAAGCCAAGGAGAAAACCAAGTCGCTGCAGGATTCT ATTCAGAAGCTGGATAAGTACAGGAACGTTGTCACGCGGAGGCGGCAGAGGAGCGAAGGA GGTGCGACTGAGAGGTCATCAGGGAGTGGGTCGGGTTCCCTGAGGATGGGGGCTCAGAAC AGTATGGATAATCCTGGCCAGCGGCTGGAGGAGAGGGCTAAGAGTGCGACCACAAGCAAG CGTGTCCGCTCATCGCTAGCAGCAGATGCACGGTTAGAAGGGCGTGGTAATGTTCCTACA AGGCAAGGTCCTCTGGCGGACAGTGAGAAAAGTTCCTCTTTGGAGAAGGAAAAAAACTCT TTGAGGAATGTCAATGCTGCATCAGGGTTTTCTGAAGACAAATTACGGGGCCTAGCTCCT GGAGGTGAAGGTTGGGAGAAAAAGTTGAAACGTAAGCGCTCTGTTGGAACTATGCTGAAC AGAGGCAATGACGTAGACCGAGATGTTAAACCGTTGGTTCAACATAGACCAAACAATGAA GCTCGCATGCGATCTAGTGATGGTCTTCCAATTAGGCATGGAGCTTCTGCTGGAGCATTA GGAGGAAGCAAGATGGATGGAGGTTCTCAACAGAGTAATGCAGGTTCCCGTTATCTACTG AAGGCAGACATGGACTCCACTTCTCTTCCAAATGAAAGAAGAGAGCGCCATTTAGGGATA GACAAAGAACGGGTTTTGGTGAAAGGAAACAAGGCAAATACCTCTGAGGATATGCAACCT GGAACTTTAAATCCTCTGACTAAGGGCAAGGCATGCAGAGCACCAAGAACTAGTTCCCTT GTTGTTATGAATTCATCATCCACTCTTCAGCGCTCATCTGGAGGAATCGATGAATGGGAA GAAACACCATCCACCAATAAATCCTCTCCTTTGGGAGGCACTGCAAATCGCAAGCGTCCC ATGACTGCAAGTGGGTCTTCACCTCCTGTTGCTTGGGTGGGTCAACGTCCACAGAAAATG TCACGGACAAGAAGAGCAAATGTTGTTTCCCCAGTCTCAAATTTTGATGAAGGCCTATCT GAAGGATCACCACTTGATGCTGCTGTTAGACCAGCGGTAGAGTCACCTGGCCTTTTGCTT CCAAGGGGTGTAGCTAGTAATAATTCACAAGTTACACCAAGAATGGATAATATTTCATCT CCAGCTGGTCTGTCAGAAAGCGAAGACTCTGCTGCTACGGAAAATAAGAACAAGGATAAA ATCAGTAATAGTGGTGATTTTGAGAACGAGGGCGCAAATTCAGCCCATAATTCAGCAGAC TTAATTATCTCATCGAAGAAAAGCAGGATACTGTTAAAAGAAGAGCTTGAAGATGGAAGT ATTCGACGGCAAGGGAGGAGCGGAAGAAACACTATGCATGTTAAAGGGTGTGCATCCATG CCAAGAGAGAAGTTGGACAGCCCAGAAACAAGAAAGCTGCTGAAGAGCGGAAGACCTGTA TCTGAAAAGAATGAAAGTAAGTTGGGCCGCCCTCCAACGAAGAAGGGTTCAGACCGCAAA GCATCATCTCGACACTCGGAGATCCTAAATTGTGGGTTAACAGATATATCAGGTGAATCA GAAGATGACCGGGAAGAGCTTCTAGCTGCTGCAAATGCTGCGCGCAGTGCCATTGTTAAT GCATATGCTGGTCCATTTTGGAAGAAAATAGAACCGATGCTTACTTTCATCAGCTCTGAA GATTTATCTTTCTTAAAGCACCAGATTACATTTTTGGAAGAGCTTGAGATGGGCATGTCT AAGTCATCCGATGAACATAATTTGAACACATCAACTAACTACAGTGGGCCATTATCAATG GGTCAAAATTCATCTCTGCCTCAGTCAAATTCATGTGTGTCATTGGAGCAAAGCGAAGCA AATGGACCCAGGACAAGAGAATCTATTGATATTTTGTCTCCCAATGATGAAAACACTGCA TCTCAAAAGACACATGCAGAAGAATTGTTTGGTGGAATGGCTTCCTTGACACACAAACTC TTCTCTGCTTTTATTGTAGAAGATGGTGATAATTCTTCTGAATGCAATGGAGGAGATATA CTTCTTGAGTTCTCAAATGACTTCCTTCCTTATGCTGCCAACATGAACTTAGAAAATGAT TTTGAAGCTAGTGCAGTAAAATCCAACTTTGGATCAAGTCCTGATTTCAAGCACTCAAAC CATAGCTCAGTGCATAACAGCATGTCCAATGGTTTTACAGCTTCCAGCAATTTGAGGGCC TCATATAGTCCAAATTCAATTTGCAGTGAGAATGCATCGGATGCGATAAAATTTGCAGTA TATCCAGAAAATGGTGGTTTTCATGAATTTGTGCCACATATCTCACAACAGTATCAAAAC TGTGCAAAAAGTACGCCTTTACCACCATATGAATATCAGTATGACCAGTTGCCTGTGCAT GACAGAGCTTTAATCGAGCTGCACAGTATTGACCTTTGTCCAGAGATGCCAAAGCTGGAT GATGGAGAGGATGAGGACATTGATAAAGTTATTACGGAGCTGCAGAAAAGACTGTTTGAG CAGGTGAATCAAAAGAAGTGCCAATTACATAAGTTGGACAAAGCAATCCGTGATACTAAA AATATGGAGGAGAGGAGTCTGGAGCAACATGCAATGAACAAGCTAGTGGAGATGGCATAC AAAAAACTGATGGGTGGCCGTGGTAGTTCTAGTCATAAGGGTGGTCTCAATAAAGCTGCT AATAAGGCTGCAAAACAAGTTGCATTGGCTTTTGCCAAGAGAACACTTGCCCGGTGCCAG AAATTTGAGGAAACAGAGAAAAGCTGCTTCAGAGAGCCTTTCCTTTGGAATGTGCTGTCT GCACCTTTGCCAAAGAATGATGCAATAGATGGTGGTCTCCCAGGATCTGCAGATAGGCCA AAGCTTTTAAAGCTTGACAGAAGTCCATTGAGCCAAGGTACTACAAAATGGAAAAAGAGT GACCGAGAAAGGGATCAAAACAGAGACGCGTCTTTGAAGAATTCTAATTCGAAATCAGGA CGCAATTCGTCCGGCAATGCAAGGAGTGAGCGTAAAACTAAGATAAAACCGAAGCAAAAG CTAGCACAGTTGTCGACATCTGGAAATGTTCTTGGAAGAGTTACGGAGCCATCAAATTTC GCAGCACCCGGCCAGAGAGAATCCCATGATTGGACGAGTACGTCGAGCACAAGACCTACT CAACCAGTCAGAAACAGCGCAGCTACTGTTGCCCAGGATACCTTAGATGCTCCATTGGCA AATTTGCCTGCAATAGATCCAATGGACATCTTGGACGTGCCTGAAGGTAACGACATCAGT TCGTGGTTTACTGATGGTCTTGATGATTCCTTACAAGATTTTGACTTCTCCGGAGGCCTA GAAATCCCAGATGACGATCTTACCCAACTGGGATTCATGTAAACTGAACCGGTAAATATG TACATGTTCATATTAATTTTAAGTGTTGATCC