Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0966200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:42613788:42614622:-1 gene:Os01g0966200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function YGGT family protein. (Os01t0966200-01)
Sequence

ATGACCATGGAAGCCTCCATGTCCAGGACAGTGTCCATGCTCTTCTCCGCCAGGAGGTGC
ATCGTCGCCAGCGCCGCCAAGGACATCGAGATAGCACAAGGAGGAAGAAGGAGAAGAAGC
AACGATGTGAAGCAGCAGCGAGGGTCACACGGCCAGCTCGCCGTGGCCGCGGCGACGACG
GCGGCGGCCATGACCGGCCAATGCCACGCTGCTGCTGCTGCTGCTGCACCGGAGCGTCAG
TGGCAGGAGGTGGCGGAGTGGGTGTGCAGGGCGGTGGCGGTGGTAGGGGAGCTGGACCCA
GCGACGGCGAAGGCGGCGATCGGGGTGGCCGGGCCGGCGCTGTCGGCGTTCGGGTTCCTG
TTCATCGCCCGGATCGTGATGTCGTGGTACCCGAGGCTCCCCGTGAGGGAGTTCCCCTAC
GTGGTGGCGTACGCGCCGACGGAGCCGCTCCTCGCCGTGACGAGGAAGGTGATCCCGCCG
CTCGGCGGCGTCGACGTCACGCCGGTGGTGTGGTTCGGCCTCGTCAGCTTCGCCAGCGAG
ATCCTCGTCGGCCCACAGGGATTGCTCGTGCTCCTCTCTCAGCAAAAGCCTTAG

Peptide Sequence

PEP ID

Os01t0966200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:42613788:42614622:-1 gene:Os01g0966200 transcript:Os01t0966200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function YGGT family protein. (Os01t0966200-01)
Sequence

MTMEASMSRTVSMLFSARRCIVASAAKDIEIAQGGRRRRSNDVKQQRGSHGQLAVAAATT
AAAMTGQCHAAAAAAAPERQWQEVAEWVCRAVAVVGELDPATAKAAIGVAGPALSAFGFL
FIARIVMSWYPRLPVREFPYVVAYAPTEPLLAVTRKVIPPLGGVDVTPVVWFGLVSFASE
ILVGPQGLLVLLSQQKP

Transcript Sequence

Transcript ID

Os01t0966200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42613788:42614622:-1 gene:Os01g0966200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function YGGT family protein. (Os01t0966200-01)
Sequence

AAGGAAGGCCTCTCCTCCTCGTGGCCATGACCATGGAAGCCTCCATGTCCAGGACAGTGT
CCATGCTCTTCTCCGCCAGGAGGTGCATCGTCGCCAGCGCCGCCAAGGACATCGAGATAG
CACAAGGAGGAAGAAGGAGAAGAAGCAACGATGTGAAGCAGCAGCGAGGGTCACACGGCC
AGCTCGCCGTGGCCGCGGCGACGACGGCGGCGGCCATGACCGGCCAATGCCACGCTGCTG
CTGCTGCTGCTGCACCGGAGCGTCAGTGGCAGGAGGTGGCGGAGTGGGTGTGCAGGGCGG
TGGCGGTGGTAGGGGAGCTGGACCCAGCGACGGCGAAGGCGGCGATCGGGGTGGCCGGGC
CGGCGCTGTCGGCGTTCGGGTTCCTGTTCATCGCCCGGATCGTGATGTCGTGGTACCCGA
GGCTCCCCGTGAGGGAGTTCCCCTACGTGGTGGCGTACGCGCCGACGGAGCCGCTCCTCG
CCGTGACGAGGAAGGTGATCCCGCCGCTCGGCGGCGTCGACGTCACGCCGGTGGTGTGGT
TCGGCCTCGTCAGCTTCGCCAGCGAGATCCTCGTCGGCCCACAGGGATTGCTCGTGCTCC
TCTCTCAGCAAAAGCCTTAGCAAACTCTGTTTCGTTCGTTCGTTTCCATGTGAAAAGTGA
AGCAAATTAATACGCTGTGATTCGGACTTTACACGATCTCTTGTAGTATTAATCGTCGGC
TACAAAAACCAAGTTCTAACG