Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0965900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:42587307:42590270:-1 gene:Os01g0965900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0965900-01)
Sequence

ATGCCACCGCCGCTCGATCCGATCCTGGCCTGCATGCTCAATCTCCGCCGCGCGACTGCT
GCCGCCGCCGTCGACGGGCTCTGGTTCTCCTTCTTCTCCACCACGACGACTGCAGGAGGA
GCCATGGAAGAGGAGAAGGCAGCCTCGCCCGTCTCCCGGCACATCATGCCGCATCTCCTC
AACATATACGGATCGTGCGCGACGGCTCGGGACTTCGAGATTTACGCGGCGCATGCCACA
TTCGAGGACCCGCTTATGCGAGCTCATGGGGTTAAGCAGATCAAATCGGCCTTCTACACA
CTCCCCAAGTTATTCGGTGAATCCAAAATCGTGGAGTACACAATTACAGAAAACGAAACC
GCGCCCGGAAAAGTCGAGATACTGATCGACAACAAGCAGCACTACAAGTTCCTGGGCAGG
GCCATCGACCTGGCGTCGCTCATCACGCTCGACGTCGAGGACGGCAAGGTTGTGAAGCAC
CAAGACTGGTGGGACAAGAAGCCTCTCAAGAACAGGGACACGGTGAGCTTCCCGGTGGTC
GGCCGGCTGGCGGAGGCGACCCGCCGCGGCGCCATGCTGCTCACTCACGCTCTCATGGGC
TGCGGCAAGGACCCATAG

Peptide Sequence

PEP ID

Os01t0965900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:42587307:42590270:-1 gene:Os01g0965900 transcript:Os01t0965900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0965900-01)
Sequence

MPPPLDPILACMLNLRRATAAAAVDGLWFSFFSTTTTAGGAMEEEKAASPVSRHIMPHLL
NIYGSCATARDFEIYAAHATFEDPLMRAHGVKQIKSAFYTLPKLFGESKIVEYTITENET
APGKVEILIDNKQHYKFLGRAIDLASLITLDVEDGKVVKHQDWWDKKPLKNRDTVSFPVV
GRLAEATRRGAMLLTHALMGCGKDP

Transcript Sequence

Transcript ID

Os01t0965900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42587307:42590270:-1 gene:Os01g0965900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0965900-01)
Sequence

GCATGCCAACTGGACTAGTCAACCACGGCAGGGTAGGCGACTAGACTAGACTAGTACGCT
TCTCTTCTCGCCATTTGAATGAATGCCACCGCCGCTCGATCCGATCCTGGCCTGCATGCT
CAATCTCCGCCGCGCGACTGCTGCCGCCGCCGTCGACGGGCTCTGGTTCTCCTTCTTCTC
CACCACGACGACTGCAGGAGGAGCCATGGAAGAGGAGAAGGCAGCCTCGCCCGTCTCCCG
GCACATCATGCCGCATCTCCTCAACATATACGGATCGTGCGCGACGGCTCGGGACTTCGA
GATTTACGCGGCGCATGCCACATTCGAGGACCCGCTTATGCGAGCTCATGGGGTTAAGCA
GATCAAATCGGCCTTCTACACACTCCCCAAGTTATTCGGTGAATCCAAAATCGTGGAGTA
CACAATTACAGAAAACGAAACCGCGCCCGGAAAAGTCGAGATACTGATCGACAACAAGCA
GCACTACAAGTTCCTGGGCAGGGCCATCGACCTGGCGTCGCTCATCACGCTCGACGTCGA
GGACGGCAAGGTTGTGAAGCACCAAGACTGGTGGGACAAGAAGCCTCTCAAGAACAGGGA
CACGGTGAGCTTCCCGGTGGTCGGCCGGCTGGCGGAGGCGACCCGCCGCGGCGCCATGCT
GCTCACTCACGCTCTCATGGGCTGCGGCAAGGACCCATAGGCCATCGCCTCCGACAGCCC
TACAAGTGGACAATCTCGCTACCCGTATAAAAATATGTTTAATATAGTTTATTCTCTATT
CACTAGTACTACCTCCTTTCCTAAATATATAAAGTTGGTTTGTTTAATTTTAAACGAATC
AACGTCATACAAATAACACGGAGGGAGTACATTTTAGGTGGACTGTAAATTAAAGATTGT
ACTCCAGATGAGTATGACGTTTTTTTGCCTCATATCACTATTATGTAATATCATTTGTAT
CTACTACAGTACAATGTTTGCTTTACAATAATGAATGTAGTACTACGTTGTATGT