Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0965400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:42562823:42566993:1 gene:Os01g0965400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:yellow-green leaf 8 description:Chloroplast-targeted UMP kinase, Regulation of leaf colour (Os01t0965400-01)
Sequence	ATGGCCGCCGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGC CTCTCGCCTTCGCCGCCGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCG GCGCGCCCGCGGCGAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGC GCCGCCGGCTCCGACTCTCCCTCCAACTTTGGAGGTCAAACATCACTGATGCCACCATTC AGCCTTATGCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTG CTTAAAGTAAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATC ACGATGGCAATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATT GTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGAC CGCTCATCAGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAA GCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAA GTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGAAAGGAAGAGTTGTT ATATTTGCTGCTGGTACAGGGAACCCATTCTTTACAACTGATACAGCTGCTGCTCTTCGT TGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGAC GCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTG CAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAAC ATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGT GAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCA CTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGA

Peptide Sequence

PEP ID	Os01t0965400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:42562823:42566993:1 gene:Os01g0965400 transcript:Os01t0965400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:yellow-green leaf 8 description:Chloroplast-targeted UMP kinase, Regulation of leaf colour (Os01t0965400-01)
Sequence	MAAAAAAAVACGMSTSFLIRLSPSPPASSHVPLPRSPASSARPRRASSVSLSTAPRPRAR AAGSDSPSNFGGQTSLMPPFSLMLDEGSRSKKPYRWQRVLLKVSGEALAGDHTENIDPKI TMAIAREVASVTRLGVEVAIVVGGGNIFRGASWAGCSGLDRSSADYIGMLATVMNAIFLQ ATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALR CAEINAEVVLKATNVDGVYDADPKRNPNARLLEAVSYHEVQTRDLSVMDMTAITLCQENN IPVVVFNLQKPGNIAKAIVGEKVGTFIGCTKDQDQIVGNALDQERRLVNEL

Transcript Sequence

Transcript ID	Os01t0965400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42562823:42566993:1 gene:Os01g0965400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:yellow-green leaf 8 description:Chloroplast-targeted UMP kinase, Regulation of leaf colour (Os01t0965400-01)
Sequence	ATCGTCATCATCTCGTCCCCCCTCTTCCCGGCGCGGCGGTTGCTCTCCAGCCATGGCCGC CGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGCCTCTCGCC TTCGCCGCCGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCC GCGGCGAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGG CTCCGACTCTCCCTCCAACTTTGGAGGTCAAACATCACTGATGCCACCATTCAGCCTTAT GCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGT AAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATCACGATGGC AATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATTGTTGTTGG TGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATC AGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAAT GGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGA ACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGAAAGGAAGAGTTGTTATATTTGC TGCTGGTACAGGGAACCCATTCTTTACAACTGATACAGCTGCTGCTCTTCGTTGTGCAGA AATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCC CAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAG AGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGT TGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGT TGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCA AGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTA GCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCT TATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACA GAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGC AATCTGATAAATCACATTTATATCTTAAAATCATTGCATGTGGCATGTATGATGTCTTCA CCT