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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0964900-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:42547600:42548935:1 gene:Os01g0964900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mitochondrial carrier protein-like. (Os01t0964900-00)
Sequence

ATGCCGCCGCCGAGCTCGAGGGAGTCGCTCTCCGTCGCCATGGCCGCCCGCTCCCAATCG
CAGCCGCACCTCGACTTCCCCTCCCTCTTCTCCGACCTCACCTCGCTCCTCCTCCAGCAC
CCGCCGCCTCCCTCCTCCTCGTCGTCGCCTGGCCCCGTCTTCTCCTCCTCATCTCTCTCC
ATCCCCGCGCCCGCGCCTGCGTCGGCTGCCGTCGCCGCCACGGCGCCTCCCACCCCGCTC
GCCCGCGCGGCCATCGGGGCGTGCGCGGGCGCCGCGGCGGGGGCCTTCACCTACGCCGCT
CTGCTCCCCATCGACGCCGTCAAGACCCGCATCCAGGCCGGCGCCGCCGCGGGGGGGTCG
TGGCAGGTGTTCCTCGACATCCTCCGAACCGACGGGCCCCTGGGGCTCTACCGCGGCCTC
TCCGCCGTCATCCTCGGCTCCGCGTCCTCCTCCGCCGTCTACTTCGGCACGTGCGAGCTC
GCCAAGTCGCTGCTCCGCCCCCACCTCCCACCCTTCCTCGTGCCGCCGCTCGCCGGCGCC
AGCGGCAACGTCTCCTCCTCCGCCATCATGGTCCCCAAGGAGCTCATCACCCAGCGCCTC
CAATCCGGCGCCGCCAAGGGCCGCTCATGGCAGGTGCTCCTTCAGATCCTCCAGACCGAC
GGATTCTTCGGCCTCTACGCCGGCTACGCCGCCACCCTCCTCCGCAACCTCCCCGCGGGG
GTCCTCAGCTACTCCTCCTTCGAGTACCTCAAGGCATTCACCCTCAAGCAACGCAACAAG
GAGAGCCTCACGCCGGGAGAGAGTGTGCTGTGCGGCGCTCTCGCGGGGGCCATATCGGCG
GCGCTCACCACCCCGCTCGACGTCGTCAAGACGCGCCTCATGACCAGGGTGGGCACCGAG
GGGAGCCGCACCGTGGTTGGGACAATGCGGGAGGTCGTCGCCGAGGAGGGGCTGATGGGC
TTGTCCCGGGGGATTGGTCCGAGGGTGCTGCACAGCGCTTGCTTCGCCGCGCTGGGATAC
TGCGCCTTCGAGACGGCGAGGCTTGCGATTCTCAAATGGTACATTGAAGACTGCGAGAGG
AAGGCTGCAGCGGAGATGAAGGCTGGAGTAGGCGCTGCTTGA

Peptide Sequence

PEP ID

Os01t0964900-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:42547600:42548935:1 gene:Os01g0964900 transcript:Os01t0964900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mitochondrial carrier protein-like. (Os01t0964900-00)
Sequence

MPPPSSRESLSVAMAARSQSQPHLDFPSLFSDLTSLLLQHPPPPSSSSSPGPVFSSSSLS
IPAPAPASAAVAATAPPTPLARAAIGACAGAAAGAFTYAALLPIDAVKTRIQAGAAAGGS
WQVFLDILRTDGPLGLYRGLSAVILGSASSSAVYFGTCELAKSLLRPHLPPFLVPPLAGA
SGNVSSSAIMVPKELITQRLQSGAAKGRSWQVLLQILQTDGFFGLYAGYAATLLRNLPAG
VLSYSSFEYLKAFTLKQRNKESLTPGESVLCGALAGAISAALTTPLDVVKTRLMTRVGTE
GSRTVVGTMREVVAEEGLMGLSRGIGPRVLHSACFAALGYCAFETARLAILKWYIEDCER
KAAAEMKAGVGAA

Transcript Sequence

Transcript ID

Os01t0964900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42547600:42548935:1 gene:Os01g0964900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mitochondrial carrier protein-like. (Os01t0964900-00)
Sequence

ACCCTTCTCTCCACGCAGGCGCAGCGGAGTAGGTGAAGGTGAAGGTGAAGGTGGAGGTGA
CCATGCCGCCGCCGAGCTCGAGGGAGTCGCTCTCCGTCGCCATGGCCGCCCGCTCCCAAT
CGCAGCCGCACCTCGACTTCCCCTCCCTCTTCTCCGACCTCACCTCGCTCCTCCTCCAGC
ACCCGCCGCCTCCCTCCTCCTCGTCGTCGCCTGGCCCCGTCTTCTCCTCCTCATCTCTCT
CCATCCCCGCGCCCGCGCCTGCGTCGGCTGCCGTCGCCGCCACGGCGCCTCCCACCCCGC
TCGCCCGCGCGGCCATCGGGGCGTGCGCGGGCGCCGCGGCGGGGGCCTTCACCTACGCCG
CTCTGCTCCCCATCGACGCCGTCAAGACCCGCATCCAGGCCGGCGCCGCCGCGGGGGGGT
CGTGGCAGGTGTTCCTCGACATCCTCCGAACCGACGGGCCCCTGGGGCTCTACCGCGGCC
TCTCCGCCGTCATCCTCGGCTCCGCGTCCTCCTCCGCCGTCTACTTCGGCACGTGCGAGC
TCGCCAAGTCGCTGCTCCGCCCCCACCTCCCACCCTTCCTCGTGCCGCCGCTCGCCGGCG
CCAGCGGCAACGTCTCCTCCTCCGCCATCATGGTCCCCAAGGAGCTCATCACCCAGCGCC
TCCAATCCGGCGCCGCCAAGGGCCGCTCATGGCAGGTGCTCCTTCAGATCCTCCAGACCG
ACGGATTCTTCGGCCTCTACGCCGGCTACGCCGCCACCCTCCTCCGCAACCTCCCCGCGG
GGGTCCTCAGCTACTCCTCCTTCGAGTACCTCAAGGCATTCACCCTCAAGCAACGCAACA
AGGAGAGCCTCACGCCGGGAGAGAGTGTGCTGTGCGGCGCTCTCGCGGGGGCCATATCGG
CGGCGCTCACCACCCCGCTCGACGTCGTCAAGACGCGCCTCATGACCAGGGTGGGCACCG
AGGGGAGCCGCACCGTGGTTGGGACAATGCGGGAGGTCGTCGCCGAGGAGGGGCTGATGG
GCTTGTCCCGGGGGATTGGTCCGAGGGTGCTGCACAGCGCTTGCTTCGCCGCGCTGGGAT
ACTGCGCCTTCGAGACGGCGAGGCTTGCGATTCTCAAATGGTACATTGAAGACTGCGAGA
GGAAGGCTGCAGCGGAGATGAAGGCTGGAGTAGGCGCTGCTTGAGTTTGTGAGTGCTCTT
TCAGGAAAGTTGGCTGTTGATTTTGCTCCCAATGATGCCATGACTGTCTCAGGAGTTTTA
CTGTACCTACCTAGCTATGCTATGATGCAGATAATGCACCTGCTTAAATTGTTTGAAACT
TAAGCATCCTTGAAAG