Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0964800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:42541334:42544499:1 gene:Os01g0964800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding. (Os01t0964800-01)
Sequence	CGCACAGCTTTCCCAACCCCAGCGTACGGCCGCGGCCGCCGGCTTTGTCTGGCCTCTTCT GCTCCCCTCTCCTTCCTGTTCGGTTCGGCCGGATCTAGGACTCGGAGCAGAGGCTGCGCC GCGGGCTTAGTAGGGATCGATCCCCGGCGAGCTCGCCCCCCCGTGACTCCTGCCTCCTCT GATTTTTCAATATTAAATCAGCCTTGTTATTCCTTCAATAGCAGTTCTTGGAGATCAGAT GTGATAAATATGCACACTAAAGGGGCTTCTTCTGATGTTATCAGAGTAAGCACATCTAGT GCCCCTAGTACATCAAGTCACGGTTCTGCACAAGATGACTGTGATTCTTCAGGTGATGTG TATGTATGGGGTGAAGTTATCTGTGATAACTCTGTAAGAACTGGTTCTGATACTGTAGTT AGGTCAACTGTTAGGACCGATGTCCTGCGACCTAAGCCTTTGGAATCTAATTTAGTCCTT GATGCGTATCATGTGGATTGTGGAGTTAAACATTCTGCTTTGGTCACAAAAAATGGAGAA GTCTTTACATGGGGTGAAGAATCTGGTGGACGCCTTGGCCATGGATCACGAGAAGATTCT ATTCATCCTCGTCTAATTGAGTCATTAGCAGTTTGCAATGTGGATATTGTTGCTTGTGGG GAGTTCCATACTTGTGCTGTGACAACAGCTGGGGAACTGTATACTTGGGGAGACGGAACA CATAATGTTGGACTTCTAGGCCATGGTAAAGATGTAAGCCACTGGATTCCAAAAAGAATT GCAGGAGCATTGGAAGGTCTTGCAGTTGCTTATGTATCTTGTGGAACATGGCATACAGCT TTGATTACAACAATGGGCCAGCTATTTACCTTTGGTGATGGCACATTTGGAGTTTTAGGC CATGGAAACCGAGAAAGCATTTCATGCCCAAAGGAGGTCGAGTCTTTATCGGGGTTGAAA ACGATTTCTGTTGCATGTGGTGTATGGCACACTGCTGCCATTGTAGAAGTTATAGTGACT CAGTCAAGTTCAAGTATATCTTCTGGAAAGCTCTTCACATGGGGAGATGGTGATAAGCAT CGACTTGGTCATGGTGACAAAGAACCACGACTCAAGCCTACATGTGTGGCTTCACTTATT GATTATGATTTTCACAGGATAGCATGTGGCCATAGTTTAACTGTGGGTCTGACAACATCT GGGAAAGTTTTGAGCATGGGTAATACTGTTTATGGTCAGCTTGGCAATCCTCGTTCAGAT GGTAAGATTCCATGTTTAGTTGAAGAGATTGTGGGTGAAAATGTTGTGCAAGTTGCCTGT GGTTCCTACCATGTTGCAGTTTTGACAATTAAGAGCGAGGTTTTTACATGGGGAAAAGGA GCCAATGGAAGACTAGGTCATGGAGATATAGAGGACAGAAAAATACCTACACTGGTTGAG GCATTGAGAGATAGGTCTGTTAGGCACATAGCCTGTGGAGCAAACTTCACTGCTGCTATA TGCCAGCATAAGTGGGTCTCTGGAGCCGAGCAGTCACAGTGTGCTTCATGTCGACAACCA TTTGGGTTCACCCGAAAGAGGCATAATTGCCATAATTGTGGACTTGTCCATTGTAATGCG TGCACCTCGAGGAAGGCTGTCAGGGCAGCTTTGGCTCCCAATCCTGCAAAACCTTACCGT GTTTGTGATTCCTGTTTCTTGAAATTGAACAATGCTGTAGACTCTAGTGCAATTAGT

Peptide Sequence

PEP ID	Os01t0964800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:42541334:42544499:1 gene:Os01g0964800 transcript:Os01t0964800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding. (Os01t0964800-01)
Sequence	RTAFPTPAYGRGRRLCLASSAPLSFLFGSAGSRTRSRGCAAGLVGIDPRRARPPVTPASS DFSILNQPCYSFNSSSWRSDVINMHTKGASSDVIRVSTSSAPSTSSHGSAQDDCDSSGDV YVWGEVICDNSVRTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGE VFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGT HNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLG HGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKH RLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSD GKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVE ALRDRSVRHIACGANFTAAICQHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNA CTSRKAVRAALAPNPAKPYRVCDSCFLKLNNAVDSSAIS

Transcript Sequence

Transcript ID	Os01t0964800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42541334:42544499:1 gene:Os01g0964800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding. (Os01t0964800-01)
Sequence	TTCCATTTCTTCCATCCGTCGCCGGGGCTCCCGCTCCTCTGGTGTCGCCGCCGCGCCGCG CCGCGCCGCTTCTCCCCCCCAACTCATCCGCCGCTCGCCCGACGACCTCGTCGGCGGCCG GATCTACTCGGCGGCGGAGCGTCCAGGTCCAGCGCCTGGCGGAGCAGAGCTTCGCGGGCC AGCAAGCGAGCCTCTCCGGCGGCTGCGCGCTTAGGCAAGGCGAGAAGCTAAGGCCTTGTG CAAGACCAGGCTCTCCTCTCCGTTCTGCGTCGCCGTCTCCGACGACTCCACCGCGCACGA CGAGCTCCAAGAGAGAGGGGGCAAAGAGGAATCAAGAGTTGGAATCGGGGAGCTTAGCGC ACAGCTTTCCCAACCCCAGCGTACGGCCGCGGCCGCCGGCTTTGTCTGGCCTCTTCTGCT CCCCTCTCCTTCCTGTTCGGTTCGGCCGGATCTAGGACTCGGAGCAGAGGCTGCGCCGCG GGCTTAGTAGGGATCGATCCCCGGCGAGCTCGCCCCCCCGTGACTCCTGCCTCCTCTGAT TTTTCAATATTAAATCAGCCTTGTTATTCCTTCAATAGCAGTTCTTGGAGATCAGATGTG ATAAATATGCACACTAAAGGGGCTTCTTCTGATGTTATCAGAGTAAGCACATCTAGTGCC CCTAGTACATCAAGTCACGGTTCTGCACAAGATGACTGTGATTCTTCAGGTGATGTGTAT GTATGGGGTGAAGTTATCTGTGATAACTCTGTAAGAACTGGTTCTGATACTGTAGTTAGG TCAACTGTTAGGACCGATGTCCTGCGACCTAAGCCTTTGGAATCTAATTTAGTCCTTGAT GCGTATCATGTGGATTGTGGAGTTAAACATTCTGCTTTGGTCACAAAAAATGGAGAAGTC TTTACATGGGGTGAAGAATCTGGTGGACGCCTTGGCCATGGATCACGAGAAGATTCTATT CATCCTCGTCTAATTGAGTCATTAGCAGTTTGCAATGTGGATATTGTTGCTTGTGGGGAG TTCCATACTTGTGCTGTGACAACAGCTGGGGAACTGTATACTTGGGGAGACGGAACACAT AATGTTGGACTTCTAGGCCATGGTAAAGATGTAAGCCACTGGATTCCAAAAAGAATTGCA GGAGCATTGGAAGGTCTTGCAGTTGCTTATGTATCTTGTGGAACATGGCATACAGCTTTG ATTACAACAATGGGCCAGCTATTTACCTTTGGTGATGGCACATTTGGAGTTTTAGGCCAT GGAAACCGAGAAAGCATTTCATGCCCAAAGGAGGTCGAGTCTTTATCGGGGTTGAAAACG ATTTCTGTTGCATGTGGTGTATGGCACACTGCTGCCATTGTAGAAGTTATAGTGACTCAG TCAAGTTCAAGTATATCTTCTGGAAAGCTCTTCACATGGGGAGATGGTGATAAGCATCGA CTTGGTCATGGTGACAAAGAACCACGACTCAAGCCTACATGTGTGGCTTCACTTATTGAT TATGATTTTCACAGGATAGCATGTGGCCATAGTTTAACTGTGGGTCTGACAACATCTGGG AAAGTTTTGAGCATGGGTAATACTGTTTATGGTCAGCTTGGCAATCCTCGTTCAGATGGT AAGATTCCATGTTTAGTTGAAGAGATTGTGGGTGAAAATGTTGTGCAAGTTGCCTGTGGT TCCTACCATGTTGCAGTTTTGACAATTAAGAGCGAGGTTTTTACATGGGGAAAAGGAGCC AATGGAAGACTAGGTCATGGAGATATAGAGGACAGAAAAATACCTACACTGGTTGAGGCA TTGAGAGATAGGTCTGTTAGGCACATAGCCTGTGGAGCAAACTTCACTGCTGCTATATGC CAGCATAAGTGGGTCTCTGGAGCCGAGCAGTCACAGTGTGCTTCATGTCGACAACCATTT GGGTTCACCCGAAAGAGGCATAATTGCCATAATTGTGGACTTGTCCATTGTAATGCGTGC ACCTCGAGGAAGGCTGTCAGGGCAGCTTTGGCTCCCAATCCTGCAAAACCTTACCGTGTT TGTGATTCCTGTTTCTTGAAATTGAACAATGCTGTAGACTCTAGTGCAATTAGT