Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0964000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:42479710:42483308:-1 gene:Os01g0964000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VAMP-like protein YKT61 (AtYKT61) (Geranylgeranylated protein 1) (AtGP1). (Os01t0964000-01);Similar to VAMP-like protein YKT61 (AtYKT61) (Geranylgeranylated protein 1) (AtGP1). (Os01t0964000-02)
Sequence	ATGAAGATCACGGCGCTGCTGGTGCTCAAATCCCCCGGCGACGGCGACTCGTCGTCGGGT GGCGGTGGCGGCGAGCAGGAGCAGGAGCAGCAGGCGGCGGTGGTGGTGGCGAACGCGACC GACGTGAGCCACTTCGGCTACTTCCAGCGCAACCCCGCCCGCGAGTTCATCCTCTTCGTC GCCCGCACCGTCGCCGCCCGCACCCCCGCCGGCCGCCGCCAGTCTGTCCAGCACGAAGAG TACAAGGTGCATTGCTACAACCAGAATGGCCTCTGCGCCATCGCCTTCACCGACGACCAC TACCCCGTCAGGAGCGCCTTCTCCCTCCTCAACACGGTGCTGGAAGAGTACCACAAGACT TTTGGGGAGAGATGGAGGACAGCAAAAACTGATAACACCCAGCCTTGGCAATACCTGGAT GATGCCTTGACAAAATACCAGGATCCTGCAGAGGCTGACAAGTTGCTGAAAATTCAGAGG GATTTGGATGAAACTAAGATTATTCTTCACAAGACCATCGATAGTGTACTTTCTAGAGGT GAAAGATTGGATAGCCTAGTGGAGAAGAGTTCAGATCTAAGTGCTGCTTCACAGATGTTC TACAAGCAGGCCAAGAAAACCAACTCTTGTTGTACAATCCTGTAA

Peptide Sequence

PEP ID	Os01t0964000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:42479710:42483308:-1 gene:Os01g0964000 transcript:Os01t0964000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VAMP-like protein YKT61 (AtYKT61) (Geranylgeranylated protein 1) (AtGP1). (Os01t0964000-01);Similar to VAMP-like protein YKT61 (AtYKT61) (Geranylgeranylated protein 1) (AtGP1). (Os01t0964000-02)
Sequence	MKITALLVLKSPGDGDSSSGGGGGEQEQEQQAAVVVANATDVSHFGYFQRNPAREFILFV ARTVAARTPAGRRQSVQHEEYKVHCYNQNGLCAIAFTDDHYPVRSAFSLLNTVLEEYHKT FGERWRTAKTDNTQPWQYLDDALTKYQDPAEADKLLKIQRDLDETKIILHKTIDSVLSRG ERLDSLVEKSSDLSAASQMFYKQAKKTNSCCTIL

Transcript Sequence

Transcript ID	Os01t0964000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42479710:42483308:-1 gene:Os01g0964000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VAMP-like protein YKT61 (AtYKT61) (Geranylgeranylated protein 1) (AtGP1). (Os01t0964000-01);Similar to VAMP-like protein YKT61 (AtYKT61) (Geranylgeranylated protein 1) (AtGP1). (Os01t0964000-02)
Sequence	GTCAAGCTTCTTCTCTTCCTCTCCAAATTTCCAACCTCTCCATCCATCCATCCCGCATCC GATTCTTCCAACCAATCTCATCTTCTTCCTCCTCCTCGGCGGCTCGCCGATTCCCCGACG GCGATGAAGATCACGGCGCTGCTGGTGCTCAAATCCCCCGGCGACGGCGACTCGTCGTCG GGTGGCGGTGGCGGCGAGCAGGAGCAGGAGCAGCAGGCGGCGGTGGTGGTGGCGAACGCG ACCGACGTGAGCCACTTCGGCTACTTCCAGCGCAACCCCGCCCGCGAGTTCATCCTCTTC GTCGCCCGCACCGTCGCCGCCCGCACCCCCGCCGGCCGCCGCCAGTCTGTCCAGCACGAA GAGTACAAGGTGCATTGCTACAACCAGAATGGCCTCTGCGCCATCGCCTTCACCGACGAC CACTACCCCGTCAGGAGCGCCTTCTCCCTCCTCAACACGGTGCTGGAAGAGTACCACAAG ACTTTTGGGGAGAGATGGAGGACAGCAAAAACTGATAACACCCAGCCTTGGCAATACCTG GATGATGCCTTGACAAAATACCAGGATCCTGCAGAGGCTGACAAGTTGCTGAAAATTCAG AGGGATTTGGATGAAACTAAGATTATTCTTCACAAGACCATCGATAGTGTACTTTCTAGA GGTGAAAGATTGGATAGCCTAGTGGAGAAGAGTTCAGATCTAAGTGCTGCTTCACAGATG TTCTACAAGCAGGCCAAGAAAACCAACTCTTGTTGTACAATCCTGTAATAGAAACTCTGG TATAGAGTTCTGCAGTAGCACACTATGTTGGCATTTTCTTTGCTGCAAGTCTGCGATTAA TGTCATAGCATCCTGGTGTCCGAGGTGTTAAACAAAGTTAGCGGTTAACATATGCCACAG GGCTACCCTACGTAATTTTTTGTAAGTAACACAAGTGTGGTTGCCATTGAGATGATCTGT GCCTGGTACTGTGTCAAAGCTATAATTAGTGATGAAATTGTGTACTGTC