Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0962600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:42425152:42427345:-1 gene:Os01g0962600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S10-1. (Os01t0962600-01)
Sequence

ATGATCATCTCCAAGAAGAACCGCCGCGAGATCTGCAAGTACCTCTTCCATGAGGGAGTC
TTGTATGCCAAGAAGGACTACAACCTGGCCAAGCACCCAAAGGTTGATGTGCCCAACTTG
GAGGTGATTAAGCTCATGCAGAGCTTCAAGTCAAAGGAGTATGTGAGGGAGACCTTCTCG
TGGCAGCACTACTACTGGTACCTGACCAATGATGGCATTGAGCACCTCCGCAGCTACCTC
AACCTGCCATCTGAGGTTGTGCCTAACACCCTCAAGAAGTCTGCCAAGCCCCCGTCTCGC
CCATTCGGCTCTGGCCCTCCTGGTGACCGCCCCAGAGGCCCGCCTCGCTTTGAGGGTGAC
AGGCCCAGGTTTGGTGACAGGGATGGTTACAGGGGTGGCCCACGTGGTGCTCCAGGTGAT
TTTGGTGGCGAGAAGGGTGGTGCTCCAGCTGAGTTCCAGCCATCTTTTAGGGGTAGCAGA
CCTGGCTTTGGTCGTGGCGGTGGTGGCGCATTCGGTGGTGGCGCATCTTCCATGGAGTAA

Peptide Sequence

PEP ID

Os01t0962600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:42425152:42427345:-1 gene:Os01g0962600 transcript:Os01t0962600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S10-1. (Os01t0962600-01)
Sequence

MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVDVPNLEVIKLMQSFKSKEYVRETFS
WQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEGD
RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRGSRPGFGRGGGGAFGGGASSME

Transcript Sequence

Transcript ID

Os01t0962600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42425152:42427345:-1 gene:Os01g0962600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S10-1. (Os01t0962600-01)
Sequence

CCCCGCCTCGCTGCTTCGCCTCTCGTTCCCCAAGGCCCCGAAGCCGCCGGCGCCGCCGCC
CTCCTCCGGTTCGAGCTCTCCGCCACCATGATCATCTCCAAGAAGAACCGCCGCGAGATC
TGCAAGTACCTCTTCCATGAGGGAGTCTTGTATGCCAAGAAGGACTACAACCTGGCCAAG
CACCCAAAGGTTGATGTGCCCAACTTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTCA
AAGGAGTATGTGAGGGAGACCTTCTCGTGGCAGCACTACTACTGGTACCTGACCAATGAT
GGCATTGAGCACCTCCGCAGCTACCTCAACCTGCCATCTGAGGTTGTGCCTAACACCCTC
AAGAAGTCTGCCAAGCCCCCGTCTCGCCCATTCGGCTCTGGCCCTCCTGGTGACCGCCCC
AGAGGCCCGCCTCGCTTTGAGGGTGACAGGCCCAGGTTTGGTGACAGGGATGGTTACAGG
GGTGGCCCACGTGGTGCTCCAGGTGATTTTGGTGGCGAGAAGGGTGGTGCTCCAGCTGAG
TTCCAGCCATCTTTTAGGGGTAGCAGACCTGGCTTTGGTCGTGGCGGTGGTGGCGCATTC
GGTGGTGGCGCATCTTCCATGGAGTAAAGCTTGATCGGGACGGAGCATATTGTTTTGCCC
AATGGCTTATGAGATGCAATGCGCGGGGGTCGTCTTCACTGTTGGTCTTTGAATTGTGGG
AACAATGAGAATTTTTGTTTATGAAATTGTAGCTGAGGTTGTTCTAGACATGGCTGTGTT
ATGCCTTTTGTTCTGTTAGATATCACTCTCGAAATGAATCTGTTGGTTTGACCGAGAATC
TTTTAGAATGTTATGAGCAAGCTGCCATTTAATCAAAAATTCATCTCATTTTCATGCCT