Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0962500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:42421672:42424720:-1 gene:Os01g0962500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, HIT-type domain containing protein. (Os01t0962500-01);Zinc finger, HIT-type domain containing protein. (Os01t0962500-02)
Sequence	ATGGAGGAGGATCAAGGAGGGAAGCCACCCGCTCCGGATGCCGGCGGCGGCGGCGGGGGA GGGGAGAGCAAGAAGGGGAGCCCGTGCGAGGAGTGCGGCGAGCAGCCATGGAAGTACCGG TGCCCGGGCTGCTCCCGCCTCACCTGCAGCCTCCCCTGCGTCCAATCCCACAAGCGCCGC ACCGCCTGCACCGGCAAGCGCCCCCGCACCGACCCCGTCCCGCTCGCCAACTTCGACGAC CACCAGCTCCTCTCCGATTACAGCTTTCTGGAGGAGACGAAGCAGGTGGCGGAGTCCGCG CATCGCCTCATCGGCGCCTTCGGCCGCAACTACGGTGGATTCGGCGGTGCGCAGCTTCCG AAGTGGCTCTTTTACCTCCGCAAGGCGGCGCAGCGGCGTGGTATCTGGCTCCAGTTCCTT CCCAGGGGCATGGCCAGGAGGGAGCAGAACCGTTCAAGGCACAACCACAGAAAGGATTGC ATATACTGGACGCTTGAATGGAAATTTAATTCAACAGATGTTGTCCTGACTGACCACAAC ATAGATGAGCATACCAGCTTGCTATCATCATTGGAAAAACATCTGAGTCCTGGACCTTGG AAAAATCAGCTCACACCATATCGCAATACAGATTTGCGTGATCTCAAACTGTTCATTCAA AAGTCTGCCAAGGAATCAACTTCACCATATCGCCAACTCAACATAGAAGAACCATTGGGT CCACAACTGAGGAGCATTAAAATTGTCGAGTACCCAACTATTAATGTCTTTCTTCCATCA GACAGTTGTGATTTCGAAGTAGAAAAGTTTGTCAACAAGCTTCCTGCAAGTGAGAAGCCC CCTGGCAGCTCGACCGATAGCCCAGATCTAGAAGGCACTGAGTTTCATGAGGAAGAAATA GAAGAAGGAGAATTGGCACCAGAAACACAAGTTATAGACCTCAAGGAATGTGGAGCTTCA CATGCCTCTAACCTAGCTTCAGCGAAGGATACAAGTGGATCTAAGGTAGACACCAAGAGA GATTCTTCTGTGCTGTCATATATACGCAGTCTTGGATTAGATGGTCAACAAAAAGCACTA ACTGAACGAAGCAAGATGGCACCAAATACAACATCTGGGGCTTCCAAGACTAAAAATTGC ATGAAAGTCTATCCGATGGACATGGAGGAAAGTGGGGATGCTGGGGTGATCTCGGAGAGG CAGGGCATAGAATGTAAGAACCAGGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAA GGTACAACCGTATCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGT ATTCTAGCATCTGATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTG ACGCCAAATTCAACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTG GACACCGAGAAAAATCTGGGGTTATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAA ATCGGAAATGCTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTT GATCTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGG GATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGA

Peptide Sequence

PEP ID	Os01t0962500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:42421672:42424720:-1 gene:Os01g0962500 transcript:Os01t0962500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, HIT-type domain containing protein. (Os01t0962500-01);Zinc finger, HIT-type domain containing protein. (Os01t0962500-02)
Sequence	MEEDQGGKPPAPDAGGGGGGGESKKGSPCEECGEQPWKYRCPGCSRLTCSLPCVQSHKRR TACTGKRPRTDPVPLANFDDHQLLSDYSFLEETKQVAESAHRLIGAFGRNYGGFGGAQLP KWLFYLRKAAQRRGIWLQFLPRGMARREQNRSRHNHRKDCIYWTLEWKFNSTDVVLTDHN IDEHTSLLSSLEKHLSPGPWKNQLTPYRNTDLRDLKLFIQKSAKESTSPYRQLNIEEPLG PQLRSIKIVEYPTINVFLPSDSCDFEVEKFVNKLPASEKPPGSSTDSPDLEGTEFHEEEI EEGELAPETQVIDLKECGASHASNLASAKDTSGSKVDTKRDSSVLSYIRSLGLDGQQKAL TERSKMAPNTTSGASKTKNCMKVYPMDMEESGDAGVISERQGIECKNQAASHPGNLTPVE GTTVSKIDSNTDSLVPSSISILASDGFSCPQVEHNQQSRLTPNSTPEALKRKSCMKVYPL DTEKNLGLFSEVPNLGFEQEIGNAYSDLFGDINPDDFLNFDLEMMDEDELAGITSPLKLW DDLEEGEIPTA

Transcript Sequence

Transcript ID	Os01t0962500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42421672:42424720:-1 gene:Os01g0962500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, HIT-type domain containing protein. (Os01t0962500-01);Zinc finger, HIT-type domain containing protein. (Os01t0962500-02)
Sequence	GGCGCCGCAAACCCCCTCTCGACTTGAGCGAGCGAGAGATGGAGGAGGATCAAGGAGGGA AGCCACCCGCTCCGGATGCCGGCGGCGGCGGCGGGGGAGGGGAGAGCAAGAAGGGGAGCC CGTGCGAGGAGTGCGGCGAGCAGCCATGGAAGTACCGGTGCCCGGGCTGCTCCCGCCTCA CCTGCAGCCTCCCCTGCGTCCAATCCCACAAGCGCCGCACCGCCTGCACCGGCAAGCGCC CCCGCACCGACCCCGTCCCGCTCGCCAACTTCGACGACCACCAGCTCCTCTCCGATTACA GCTTTCTGGAGGAGACGAAGCAGGTGGCGGAGTCCGCGCATCGCCTCATCGGCGCCTTCG GCCGCAACTACGGTGGATTCGGCGGTGCGCAGCTTCCGAAGTGGCTCTTTTACCTCCGCA AGGCGGCGCAGCGGCGTGGTATCTGGCTCCAGTTCCTTCCCAGGGGCATGGCCAGGAGGG AGCAGAACCGTTCAAGGCACAACCACAGAAAGGATTGCATATACTGGACGCTTGAATGGA AATTTAATTCAACAGATGTTGTCCTGACTGACCACAACATAGATGAGCATACCAGCTTGC TATCATCATTGGAAAAACATCTGAGTCCTGGACCTTGGAAAAATCAGCTCACACCATATC GCAATACAGATTTGCGTGATCTCAAACTGTTCATTCAAAAGTCTGCCAAGGAATCAACTT CACCATATCGCCAACTCAACATAGAAGAACCATTGGGTCCACAACTGAGGAGCATTAAAA TTGTCGAGTACCCAACTATTAATGTCTTTCTTCCATCAGACAGTTGTGATTTCGAAGTAG AAAAGTTTGTCAACAAGCTTCCTGCAAGTGAGAAGCCCCCTGGCAGCTCGACCGATAGCC CAGATCTAGAAGGCACTGAGTTTCATGAGGAAGAAATAGAAGAAGGAGAATTGGCACCAG AAACACAAGTTATAGACCTCAAGGAATGTGGAGCTTCACATGCCTCTAACCTAGCTTCAG CGAAGGATACAAGTGGATCTAAGGTAGACACCAAGAGAGATTCTTCTGTGCTGTCATATA TACGCAGTCTTGGATTAGATGGTCAACAAAAAGCACTAACTGAACGAAGCAAGATGGCAC CAAATACAACATCTGGGGCTTCCAAGACTAAAAATTGCATGAAAGTCTATCCGATGGACA TGGAGGAAAGTGGGGATGCTGGGGTGATCTCGGAGAGGCAGGGCATAGAATGTAAGAACC AGGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTATCTAAGATAG ATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCTGATGGCTTCA GTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGCCAAATTCAACTCCTGAAG CTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAAAAATCTGGGGT TATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATT TGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAATGATGGATGAAG ATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGGAGGAAGGGGAGA TTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCTAGCAAATGAGCT TTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTCT TGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCGCCTTGCACTG CAGCATAGGGTGCCTGGTGTTCTTCAAGCCAAAGGTGCCTTTTTTGATAGCTGCAGTAAT TTTGGGGGTGTAACCTTGTTGTTGCTATCTTTCGGAATGGAATCAATGAACAATGTTAAT GGATGTGAAAACATGTCAGTTTGTTGCTG