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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0960800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:42361401:42363627:-1 gene:Os01g0960800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein Transporter, Pam16 family protein. (Os01t0960800-01)
Sequence

ATGGCTGCTAGGCTTCTCGCGAATCTCCTCGTCATCGGCGGCACCGTGCTGGGCAGGGCC
GCGGTCCAGGCGTATCGCCAAGCCATCGTCAATGCAAACAAAACTGGAGCTGCCCAGGAA
GCTATAAATGGTATTCGAAGGGCCAGCAAGGCCATGACTGAGCAAGAAGCCCGGCAAATA
CTAGGTATCAGCGAAAAGTCGACTTGGGAAGAGATCGTCCAGAAATACGATACTATGTTT
GAGAGGAATGCTAAGAATGGGAGCTTCTATCTCCAGTCGAAAGTTCATCGGGCTAAAGAA
TGTCTAGAAGCTGTATATCAAAAGCCCGACGTACCTAGCTGA

Peptide Sequence

PEP ID

Os01t0960800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:42361401:42363627:-1 gene:Os01g0960800 transcript:Os01t0960800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein Transporter, Pam16 family protein. (Os01t0960800-01)
Sequence

MAARLLANLLVIGGTVLGRAAVQAYRQAIVNANKTGAAQEAINGIRRASKAMTEQEARQI
LGISEKSTWEEIVQKYDTMFERNAKNGSFYLQSKVHRAKECLEAVYQKPDVPS

Transcript Sequence

Transcript ID

Os01t0960800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42361401:42363627:-1 gene:Os01g0960800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein Transporter, Pam16 family protein. (Os01t0960800-01)
Sequence

ACCCCGATTCACAAAGCCAAGCCCGACACAAACACCAAGCCACCGCCGCCTCCGCCTCCG
CCGCCGAGAGAGAGAGAGGACCAGCCAGCGATTCGCCGCCGTCATCTCCAGCTTCTGCGG
GAGCAACACCGCCAGCGCGCTCTCCCCTCCCCGCCACGCCTCGCCCATTGGGATTCGCCG
CCCTCACCGCGAGCTCCCACGTCGAGGTCACACCTAGGGTTCCATCGCCGCCGCCGCTGC
CGCCAGCGAAGGAAGAGGAGGATACAGCGAGATGGCTGCTAGGCTTCTCGCGAATCTCCT
CGTCATCGGCGGCACCGTGCTGGGCAGGGCCGCGGTCCAGGCGTATCGCCAAGCCATCGT
CAATGCAAACAAAACTGGAGCTGCCCAGGAAGCTATAAATGGTATTCGAAGGGCCAGCAA
GGCCATGACTGAGCAAGAAGCCCGGCAAATACTAGGTATCAGCGAAAAGTCGACTTGGGA
AGAGATCGTCCAGAAATACGATACTATGTTTGAGAGGAATGCTAAGAATGGGAGCTTCTA
TCTCCAGTCGAAAGTTCATCGGGCTAAAGAATGTCTAGAAGCTGTATATCAAAAGCCCGA
CGTACCTAGCTGAGGTCGAGTAGCTTGCATTTGAAGCGTTTGAGATCTATCTAATTGATC
AACCTGCCAGTGTGGCTGAAGATCGCGATTATTGTTAATTGGTTGTAACGGGATGTCACT
TAACTTGGCAATAAGTACTGTTCGACAAAAAAAAGAACACAAGTTCCACCGATTTCCATC
CGCTGTACCTTTTGTGGTTCTCTTAGGTTGGAATATATAATGGATGAATCATGACTGCGT
TTCATG