Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0960600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:42358083:42360654:-1 gene:Os01g0960600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0960600-01)
Sequence	ATGGCGGCAGGGAGCAAGAAGAATCCAGAACCTTCCTCTTCTTCTTCTTCAGGCGATCTC GGCGGCAAGACCGTACAAGAGCTCCTCGACATGGACAAGGATGCCGTCTCTGAGCTAGTG TCCGACCACTTCCATCAGCTGTACTCTCTCCAGAACCATCTTGATGTTGATGATGATGAT GATGACCATTGGTCTGAACACAATGAGCAAGAGGATCGATCTCAGTTGCAGGAGCGGCTA GCCTTCTACCGCATCATAGGTTATCAGTTATCAATGGGTGGCAAGATTGACGAACTGGAC ATTGCAAAACTGAAGGAGAAGTACTCTCCTGAAATGCTTTATAACAAGGGGTATTTCCAG TACTATGAGGATAGTCTTGAATGGTACTTCGATCCTGAAAGATGCATGTTGACTAGCCTT GATGACTACCAGAGGCTAGTGCTTTGTGATAATGGTTTGTACATGGACTGGGATCAATAC CACTCAAATTATAGTACCTACGAGAGTGATCTAGCATATGTCAAATTCTGTGAAGAGCTA GCAAATGAGACTAAGTGGTTTGAAGATTATTTGGTACTCATTGCTGTTAAGGATAAGGTA ACCATTGGTCAGTGGGACAAAGTTAAAAATATAGTTTACCTTCAAGCACTGAAGATCGCA CTACGCATTCGTGTTGTTTCTCTAATGCAAATTATGGCTGGTTTCCAGGAATATATATGG AGCATGCGGTTTGATTGTTGTAACTACAGGGATTTTGATGGTGTGTATTTTGAGGTTTGG AAGCGGGTTGCTAAGCAAAAGATGGAATTCACTGATGCTCTGTCGGAACTCTATAGAGAA GATATGTTTCCCTTGCGCAATGTTGATATTAAGGATGAGCTTGACAACATTCGAGTGAGA GCGGGATTCCATTCGATGAAGGAAAATTACGACATCTACGTGGCTTGCATTGACGAAACG GTGCCAGAAAATGAAGCTCGTCAATTGATCAAAGAGGCCGTCATAAAAATGAATCGAAAA CCAGAGACTTATTTGGATTACGCCAGGAACAAGTTGCAAATCGCACAAGATATCGGTTTG ATCACCAAAAGTACACAGGACTAG

Peptide Sequence

PEP ID	Os01t0960600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:42358083:42360654:-1 gene:Os01g0960600 transcript:Os01t0960600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0960600-01)
Sequence	MAAGSKKNPEPSSSSSSGDLGGKTVQELLDMDKDAVSELVSDHFHQLYSLQNHLDVDDDD DDHWSEHNEQEDRSQLQERLAFYRIIGYQLSMGGKIDELDIAKLKEKYSPEMLYNKGYFQ YYEDSLEWYFDPERCMLTSLDDYQRLVLCDNGLYMDWDQYHSNYSTYESDLAYVKFCEEL ANETKWFEDYLVLIAVKDKVTIGQWDKVKNIVYLQALKIALRIRVVSLMQIMAGFQEYIW SMRFDCCNYRDFDGVYFEVWKRVAKQKMEFTDALSELYREDMFPLRNVDIKDELDNIRVR AGFHSMKENYDIYVACIDETVPENEARQLIKEAVIKMNRKPETYLDYARNKLQIAQDIGL ITKSTQD

Transcript Sequence

Transcript ID	Os01t0960600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42358083:42360654:-1 gene:Os01g0960600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0960600-01)
Sequence	CTCTCGGTCCTGACACGCAAGCGTCTCCGCCAATTCCTCGCCTTTTAGGCCTCGATTCGA TTTGCGTCGGGAGCTTGACGACGGACAGCAATCGCAATGGCGGCAGGGAGCAAGAAGAAT CCAGAACCTTCCTCTTCTTCTTCTTCAGGCGATCTCGGCGGCAAGACCGTACAAGAGCTC CTCGACATGGACAAGGATGCCGTCTCTGAGCTAGTGTCCGACCACTTCCATCAGCTGTAC TCTCTCCAGAACCATCTTGATGTTGATGATGATGATGATGACCATTGGTCTGAACACAAT GAGCAAGAGGATCGATCTCAGTTGCAGGAGCGGCTAGCCTTCTACCGCATCATAGGTTAT CAGTTATCAATGGGTGGCAAGATTGACGAACTGGACATTGCAAAACTGAAGGAGAAGTAC TCTCCTGAAATGCTTTATAACAAGGGGTATTTCCAGTACTATGAGGATAGTCTTGAATGG TACTTCGATCCTGAAAGATGCATGTTGACTAGCCTTGATGACTACCAGAGGCTAGTGCTT TGTGATAATGGTTTGTACATGGACTGGGATCAATACCACTCAAATTATAGTACCTACGAG AGTGATCTAGCATATGTCAAATTCTGTGAAGAGCTAGCAAATGAGACTAAGTGGTTTGAA GATTATTTGGTACTCATTGCTGTTAAGGATAAGGTAACCATTGGTCAGTGGGACAAAGTT AAAAATATAGTTTACCTTCAAGCACTGAAGATCGCACTACGCATTCGTGTTGTTTCTCTA ATGCAAATTATGGCTGGTTTCCAGGAATATATATGGAGCATGCGGTTTGATTGTTGTAAC TACAGGGATTTTGATGGTGTGTATTTTGAGGTTTGGAAGCGGGTTGCTAAGCAAAAGATG GAATTCACTGATGCTCTGTCGGAACTCTATAGAGAAGATATGTTTCCCTTGCGCAATGTT GATATTAAGGATGAGCTTGACAACATTCGAGTGAGAGCGGGATTCCATTCGATGAAGGAA AATTACGACATCTACGTGGCTTGCATTGACGAAACGGTGCCAGAAAATGAAGCTCGTCAA TTGATCAAAGAGGCCGTCATAAAAATGAATCGAAAACCAGAGACTTATTTGGATTACGCC AGGAACAAGTTGCAAATCGCACAAGATATCGGTTTGATCACCAAAAGTACACAGGACTAG AGCCAAGATCCTAGAGGTCACTGCACAAAACAGGGGAGACAATAGTGAAGCAAAGCTTGC CATGGACAACTAAGCAAAAGGTGGCCGAAAGTGCAATTCTTTTGCTGTGTTCGCGAAAAA AAAGATGGCCGAAAAACTATTTTCTTTAGTACTAAGAAGAAAAAGGATATTGATGCTACG GTTTATTATCTGTAGTTTTATCCATTGTTACACTCTGCAACTATATTACATCCCGATGTA AATTGAAATTTATGCATTGGCC