Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0960400-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:42336327:42344278:-1 gene:Os01g0960400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0960400-01);Similar to predicted protein. (Os01t0960400-02);Similar to Leucine-rich repeat transmembrane protein kinase. (Os01t0960400-03)
Sequence	TCTGGCCGACCAGCAAGCAACATAACCACAATAGATCTTTCCCACAATCTTCTAAATGGA TCAATTCCTGGAAGTTTCTCTGGCCTTCCCAATCTACAAAGACTGTCATTGGACAATAAC AATTTGGATGGTTCTGTTCCATCAGATGTCTGGCGGAATATTGATTTCAGTGGAAATAGA AGTCTTATATTGGATTTCCAGAACAATTCTCTAACCAATCTATCAAATCCTCTTTCACCA CCTGCCAATGTTACCATCCTGTTATCTGGAAACCCCATCTGCACATCTCCAAATCAACTG AACATTACTCAGTACTGTCAATCAGTGCCAGTTATTGTGCCTGACGGTTCTGCAAGTAAT GCCACAGTTTGTCCGCCATGCTCTACTGACCTTCCGTTTGAAAACATACTGATGTCACCA ATACGATGTATATGTGCTATTCCACTTTATGTTGATTACCGGCTAAAGAGTCCTGGATTT TGGGATTTTGTTCCATATGAAGGACAGTTTCAACAGTACTTGTCATCTGGACTTTCATTG TCTTCTTACCAATTAGAAGTTTCTCAATTTATGTGGGAAGAAGGCCCACGGGTGAAGATG AATCTGAAACTGTTTCCAAATAACACTGCTTATTTTAATAAGAGCGAGGTGTTAAGACTG AGAGGAATGTTCACAGGCTGGCTGATTCCAGACTCTGATATATTCGGGCCCTATGAGCTC CTCAACTTCAATCCAGGGTGGTATAACAATTTATTTCCAGATCGTGCAAAGTCCAGCCTA AGTACAGGTGCCATTGTTGGTATTGTCGTGGCAGCGTTTGCTGCAGCAGCATTTCTTTCA TCCCTCATTACTCTCATTATACTGAGAAGACGTTCAAGATATTCTTCAAAAAGACGCTCT GCAAAAAGAATTCCAATGAAGATTGATGGTGTAAAAGACTTCAGTTTTCAAGAACTGTCA CATGGTACAAACGACTTTAGTGACTCAGCACTAATTGGTCAAGGAGGGTATGGGAAAGTG TACAGAGGTATTCTCTCTGATGGAACAATAGTAGCAATAAAACGTGCGCAGCAGGGATCT CTTCAGGGTTCGAAGGAGTTCTTCACAGAGATAGAATTGCTGTCCAGGCTGCATCACCGG AACCTTGTTTCATTGCTTGGTTATTGTGATGAAGAAGATGAGCAGATGCTGGTATATGAG TTTATGCCTAATGGTACTCTACGTGATCATCTTTCAGCTCGATCAAAAGAGCCCCTAAAT TTTCCCACGAGGTTACGAATTGCGCTGGGGTCGTCGCGAGGCATCCTCTATTTACACACA GAAGCAGACCCTCCAATATTTCACCGTGACATCAAAGCAAGCAATATTTTACTGGACTCA AAGTTTGTCGCAAAAGTTGCTGATTTTGGTCTCTCTCGGCTTGCCCCAGAGCCAGAATCA GAGGGGATTGCTCCTGGTCATGTGTCAACTGTTATAAAGGGTACCCCGGGTTATCTTGAT CCGGAGTATTTCCTTACTCATAAGCTGACAGACAAAAGTGACGTGTACAGCCTTGGTGTT GTTTTTCTGGAACTGCTGACAGGGATGCAACCTATTTCTCATGGAAGAAATATAGTTAGA GAGGTTGTTGCGGCCAATCAGAGTGGGATGATATTGTCAGTGGTTGACAGCCGGATGGGA TCGTACCCAGCAGAATGCGTGGAGAAGTTTGCTGCACTGGCACTGAGATGCTGCCGAGAC GAGACGGACGCAAGGCCGTCCATAGTGGAGGTGATGAGGGAGCTGGAGAAGATATGGCAA ATGACACCGGACACCGGGAGCATGTCCTCACTATCCTTGGAACCTAGCAACACAGCCACC CCATCGTCGGGATCCAGGATGATGGTTTCATCGTCATCTGGGGTTGGAAATGATGATCAC CATCACTACAACATGTCATCATCCGATGTCTCCGGCAGTAACCTCCTCAGCGGTGTTGTA CCTAGCATCAATCCTCGCTGA

Peptide Sequence

PEP ID	Os01t0960400-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:42336327:42344278:-1 gene:Os01g0960400 transcript:Os01t0960400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0960400-01);Similar to predicted protein. (Os01t0960400-02);Similar to Leucine-rich repeat transmembrane protein kinase. (Os01t0960400-03)
Sequence	SGRPASNITTIDLSHNLLNGSIPGSFSGLPNLQRLSLDNNNLDGSVPSDVWRNIDFSGNR SLILDFQNNSLTNLSNPLSPPANVTILLSGNPICTSPNQLNITQYCQSVPVIVPDGSASN ATVCPPCSTDLPFENILMSPIRCICAIPLYVDYRLKSPGFWDFVPYEGQFQQYLSSGLSL SSYQLEVSQFMWEEGPRVKMNLKLFPNNTAYFNKSEVLRLRGMFTGWLIPDSDIFGPYEL LNFNPGWYNNLFPDRAKSSLSTGAIVGIVVAAFAAAAFLSSLITLIILRRRSRYSSKRRS AKRIPMKIDGVKDFSFQELSHGTNDFSDSALIGQGGYGKVYRGILSDGTIVAIKRAQQGS LQGSKEFFTEIELLSRLHHRNLVSLLGYCDEEDEQMLVYEFMPNGTLRDHLSARSKEPLN FPTRLRIALGSSRGILYLHTEADPPIFHRDIKASNILLDSKFVAKVADFGLSRLAPEPES EGIAPGHVSTVIKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGRNIVR EVVAANQSGMILSVVDSRMGSYPAECVEKFAALALRCCRDETDARPSIVEVMRELEKIWQ MTPDTGSMSSLSLEPSNTATPSSGSRMMVSSSSGVGNDDHHHYNMSSSDVSGSNLLSGVV PSINPR

Transcript Sequence

Transcript ID	Os01t0960400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42336327:42344278:-1 gene:Os01g0960400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0960400-01);Similar to predicted protein. (Os01t0960400-02);Similar to Leucine-rich repeat transmembrane protein kinase. (Os01t0960400-03)
Sequence	TCTGGCCGACCAGCAAGCAACATAACCACAATAGATCTTTCCCACAATCTTCTAAATGGA TCAATTCCTGGAAGTTTCTCTGGCCTTCCCAATCTACAAAGACTGTCATTGGACAATAAC AATTTGGATGGTTCTGTTCCATCAGATGTCTGGCGGAATATTGATTTCAGTGGAAATAGA AGTCTTATATTGGATTTCCAGAACAATTCTCTAACCAATCTATCAAATCCTCTTTCACCA CCTGCCAATGTTACCATCCTGTTATCTGGAAACCCCATCTGCACATCTCCAAATCAACTG AACATTACTCAGTACTGTCAATCAGTGCCAGTTATTGTGCCTGACGGTTCTGCAAGTAAT GCCACAGTTTGTCCGCCATGCTCTACTGACCTTCCGTTTGAAAACATACTGATGTCACCA ATACGATGTATATGTGCTATTCCACTTTATGTTGATTACCGGCTAAAGAGTCCTGGATTT TGGGATTTTGTTCCATATGAAGGACAGTTTCAACAGTACTTGTCATCTGGACTTTCATTG TCTTCTTACCAATTAGAAGTTTCTCAATTTATGTGGGAAGAAGGCCCACGGGTGAAGATG AATCTGAAACTGTTTCCAAATAACACTGCTTATTTTAATAAGAGCGAGGTGTTAAGACTG AGAGGAATGTTCACAGGCTGGCTGATTCCAGACTCTGATATATTCGGGCCCTATGAGCTC CTCAACTTCAATCCAGGGTGGTATAACAATTTATTTCCAGATCGTGCAAAGTCCAGCCTA AGTACAGGTGCCATTGTTGGTATTGTCGTGGCAGCGTTTGCTGCAGCAGCATTTCTTTCA TCCCTCATTACTCTCATTATACTGAGAAGACGTTCAAGATATTCTTCAAAAAGACGCTCT GCAAAAAGAATTCCAATGAAGATTGATGGTGTAAAAGACTTCAGTTTTCAAGAACTGTCA CATGGTACAAACGACTTTAGTGACTCAGCACTAATTGGTCAAGGAGGGTATGGGAAAGTG TACAGAGGTATTCTCTCTGATGGAACAATAGTAGCAATAAAACGTGCGCAGCAGGGATCT CTTCAGGGTTCGAAGGAGTTCTTCACAGAGATAGAATTGCTGTCCAGGCTGCATCACCGG AACCTTGTTTCATTGCTTGGTTATTGTGATGAAGAAGATGAGCAGATGCTGGTATATGAG TTTATGCCTAATGGTACTCTACGTGATCATCTTTCAGCTCGATCAAAAGAGCCCCTAAAT TTTCCCACGAGGTTACGAATTGCGCTGGGGTCGTCGCGAGGCATCCTCTATTTACACACA GAAGCAGACCCTCCAATATTTCACCGTGACATCAAAGCAAGCAATATTTTACTGGACTCA AAGTTTGTCGCAAAAGTTGCTGATTTTGGTCTCTCTCGGCTTGCCCCAGAGCCAGAATCA GAGGGGATTGCTCCTGGTCATGTGTCAACTGTTATAAAGGGTACCCCGGGTTATCTTGAT CCGGAGTATTTCCTTACTCATAAGCTGACAGACAAAAGTGACGTGTACAGCCTTGGTGTT GTTTTTCTGGAACTGCTGACAGGGATGCAACCTATTTCTCATGGAAGAAATATAGTTAGA GAGGTTGTTGCGGCCAATCAGAGTGGGATGATATTGTCAGTGGTTGACAGCCGGATGGGA TCGTACCCAGCAGAATGCGTGGAGAAGTTTGCTGCACTGGCACTGAGATGCTGCCGAGAC GAGACGGACGCAAGGCCGTCCATAGTGGAGGTGATGAGGGAGCTGGAGAAGATATGGCAA ATGACACCGGACACCGGGAGCATGTCCTCACTATCCTTGGAACCTAGCAACACAGCCACC CCATCGTCGGGATCCAGGATGATGGTTTCATCGTCATCTGGGGTTGGAAATGATGATCAC CATCACTACAACATGTCATCATCCGATGTCTCCGGCAGTAACCTCCTCAGCGGTGTTGTA CCTAGCATCAATCCTCGCTGAACATTATTTGTTATATACTCCATAGTGTAAGACACGCAT GTATTTAAAGATTTAACTTTAAAAACATCTGACTAACAAGTAGTGTAATGTAAATCGAAT TTTATTTGCTG