Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0960300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:42329287:42335754:-1 gene:Os01g0960300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glucose inhibited division protein A. (Os01t0960300-01);Similar to Glucose-inhibited division A family protein. (Os01t0960300-02)
Sequence	ATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTCCTCCCC TTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCT CCGCGCCGCCACCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGTC TCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGT GAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATT GATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTT GTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTA CAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACT GACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTC ATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTC CGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTC ATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCA GCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAA ACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAG CATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGAC CAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAAC TTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCA GCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAA CCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAG CGATTGCAATTATCACTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGG CCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATG ACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAA GAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAG CCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTC ACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTG CTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATA GATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAA CGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCC AACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAG TATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAA TGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAG CAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACA AACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAG GCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAG AGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACC AAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAA

Peptide Sequence

PEP ID	Os01t0960300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:42329287:42335754:-1 gene:Os01g0960300 transcript:Os01t0960300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glucose inhibited division protein A. (Os01t0960300-01);Similar to Glucose-inhibited division A family protein. (Os01t0960300-02)
Sequence	MLLRLRPPPQPAASLASFLPFSPFRRFLHSPSWRPPPPPPPRRHRLLSTAVASSSSSSKV STSLEERYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQL VHEVDALGGEMGKIADRCYLQKRVLNSSKGPAVRALRAQTDKREYAVEMKKVVESTQNLF IREAMATEVMIGQNDNVEGVRTFFGMDFYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGES ASHGLTENLQQLGFETDRLKTGTPPRIDRRTVNFSGLEPQHGDEEVGWFSFDPEFHIERD QMCCYLTRTTKETHQIVRDNLDETPTYGGWVEAKGPRYCPAIEDKIVRFKDKESHQVFLE PEGRDVPELYLQGFSTGLPERLQLSLVRTLPGLENCVMLRPAYAVEYDYLPAYQCSRSLM TKKFEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKPLIILERESSYIGTLIDDLV TKDLREPYRMLTSRSEHRLLLRADNADSRLTPLGRDIGLIDDRRWELYQSKQARIKEEKE RLKSTKIPGGEFAAAVTSVSNQPVKESSTLEAILKKPHVQYKLLDKHGYGNEHLSRIEKE CVEIDIKYEGFIARQQSQLQQIVNQEHKKLPEDLDYHSMTNLSLEAREKLSKVRPQTIGQ ASRIGGVSPADMTVLLIWMESNRRMANYKRQQSTLRSAATKADDSSDEVVHASATNA

Transcript Sequence

Transcript ID	Os01t0960300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42329287:42335754:-1 gene:Os01g0960300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glucose inhibited division protein A. (Os01t0960300-01);Similar to Glucose-inhibited division A family protein. (Os01t0960300-02)
Sequence	AGCGAGCCGCGAAAAATTCCGCCGCCGCCGTTTCGTCGACCTCATCGGCGGCCATGCTGC TCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTCCTCCCCTTCTCCC CCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCC GCCACCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGTCTCGACAA GTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCG CGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGA TTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATG AGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGC GTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGA GGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAG AGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTT TCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTG GTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCAC ATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCA CACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTG ATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGT GCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATG AAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTG AAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGG GCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGC AATTATCACTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTT ATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATGACCAAGA AGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTG CAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTA TCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAG ATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAG CTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATA GACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGA AATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAAC CTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAAC TTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGG AGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTG TAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGT CACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCA GAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACC GTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAG ATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCC GACTATATCAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCT CTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCATCAAGGCACCTT TTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCCCCTACGAC GCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTT TATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATG TTTATGTATATATACATCTAATTCGCGAATGCAAGGGAGCAATGTCATTTACAGAGAAGT GAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTATCACTGTGTC CTATCACAGAAGAGGTTGCAGTGTCTTTGTGTC