Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0958900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:42268937:42274900:1 gene:Os01g0958900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsMLH1 description:Similar to MLH1 protein (Fragment). (Os01t0958900-01);Similar to MLH1 protein (Fragment). (Os01t0958900-02)
Sequence	ATGGACGAGCCTTCGCCGCGCGGAGGTGGGTGCGCCGGGGAGCCGCCCCGCATCCGGAGG TTGGAGGAGTCGGTGGTGAACCGCATCGCGGCGGGGGAGGTGATCCAGCGGCCGTCGTCG GCGGTGAAGGAGCTCATCGAGAACAGCCTCGACGCTGGCGCCTCCAGCGTCTCCGTTGCG GTGAAGGACGGTGGCCTCAAGCTCATCCAGGTCTCCGATGACGGCCATGGCATCAGGTTT GAGGATTTGGCAATATTGTGCGAAAGGCATACTACCTCAAAGTTATCTGCATACGAGGAT CTGCAGACCATAAAATCGATGGGGTTCAGAGGGGAGGCTTTGGCTAGTATGACTTATGTT GGCCATGTTACCGTGACAACGATAACAGAAGGCCAATTGCACGGCTACAGGGTTTCTTAC AGAGATGGTGTAATGGAGAATGAGCCTAAGCCTTGCGCTGCGGTGAAAGGAACTCAAGTC ATGGTTGAAAATCTATTTTACAACATGGTAGCCCGCAAGAAAACATTGCAGAACTCCAAT GATGACTACCCCAAGATCGTAGACTTCATCAGTCGGTTTGCAGTCCATCACATCAACGTT ACCTTCTCTTGCAGAAAGCATGGAGCCAATAGAGCAGATGTTCATAGTGCAAGTACATCC TCAAGGTTAGATGCTATCAGGAGTGTCTATGGGGCTTCTGTCGTTCGTGATCTCATAGAA ATAAAGGTTTCATATGAGGATGCTGCAGATTCAATCTTCAAGATGGATGGTTACATCTCA AATGCAAATTATGTGGCAAAGAAGATTACAATGATTCTTTTCATAAATGATAGGCTTGTA GACTGTACTGCTTTGAAAAGAGCTATTGAATTTGTGTACTCTGCAACATTGCCTCAAGCA TCCAAACCTTTCATATACATGTCCATACATCTTCCATCAGAACACGTGGATGTTAATATA CACCCAACCAAGAAAGAGGTTAGCCTTTTGAATCAAGAGCGTATTATTGAAACAATAAGA AATGCTATTGAGGAAAAACTGATGAATTCTAATACAACCAGGATATTCCAAACTCAGGCA TTAAACTTATCAGGGATTGCTCAAGCTAACCCACAAAAGGATAAGGTTTCTGAGGCCAGT ATGGGTTCTGGAACAAAATCTCAAAAAATTCCTGTGAGCCAAATGGTCAGAACAGATCCA CGCAATCCATCTGGAAGATTGCACACCTACTGGCACGGGCAATCTTCAAATCTTGAAAAG AAATTTGATCTTGTATCTGTAAGAAATGTTGTAAGATCAAGGAGAAACCAAAAAGATGCT GGTGATTTGTCAAGCCGTCATGAGCTCCTTGTGGAAATAGATTCTAGCTTCCATCCTGGC CTTTTGGACATTGTCAAGAACTGCACATATGTTGGACTTGCCGATGAAGCCTTTGCTTTG ATACAACACAATACCCGCTTATACCTTGTAAATGTGGTAAATATTAGTAAAGAACTTATG TACCAGCAAGCTTTGTGCCGTTTTGGGAACTTCAATGCTATTCAGCTCAGTGAACCAGCT CCACTTCAGGAGTTGCTGGTGATGGCACTGAAAGACGATGAATTGATGAGTGATGAAAAG GATGATGAGAAACTGGAGATTGCAGAAGTAAACACTGAGATACTAAAAGAAAATGCTGAG ATGATTAATGAGTACTTTTCTATTCACATTGATCAAGATGGCAAATTGACAAGACTTCCT GTTGTACTGGACCAGTACACCCCTGATATGGACCGTCTTCCAGAATTTGTGTTGGCTTTA GGAAATGATGTTACTTGGGATGACGAGAAAGAGTGCTTCAGAACAGTAGCTTCTGCTGTA GGAAACTTCTATGCACTTCATCCCCCAATCCTTCCAAATCCATCTGGGAATGGCATTCAT TTATACAAGAAAAATAGAGATTCAATGGCTGATGAACATGCTGAGAATGATCTAATATCA GATGAAAATGACGTTGATCAAGAACTTCTTGCGGAAGCAGAAGCAGCATGGGCCCAACGT GAGTGGACCATTCAGCATGTCTTGTTTCCATCCATGCGACTTTTCCTCAAGCCCCCGAAG TCAATGGCAACAGATGGAACGTTTGTGCAGGTTGCTTCCTTGGAGAAACTCTACAAGATT TTTGAAAGGTGTTAG

Peptide Sequence

PEP ID	Os01t0958900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:42268937:42274900:1 gene:Os01g0958900 transcript:Os01t0958900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsMLH1 description:Similar to MLH1 protein (Fragment). (Os01t0958900-01);Similar to MLH1 protein (Fragment). (Os01t0958900-02)
Sequence	MDEPSPRGGGCAGEPPRIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVA VKDGGLKLIQVSDDGHGIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYV GHVTVTTITEGQLHGYRVSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSN DDYPKIVDFISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGASVVRDLIE IKVSYEDAADSIFKMDGYISNANYVAKKITMILFINDRLVDCTALKRAIEFVYSATLPQA SKPFIYMSIHLPSEHVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQA LNLSGIAQANPQKDKVSEASMGSGTKSQKIPVSQMVRTDPRNPSGRLHTYWHGQSSNLEK KFDLVSVRNVVRSRRNQKDAGDLSSRHELLVEIDSSFHPGLLDIVKNCTYVGLADEAFAL IQHNTRLYLVNVVNISKELMYQQALCRFGNFNAIQLSEPAPLQELLVMALKDDELMSDEK DDEKLEIAEVNTEILKENAEMINEYFSIHIDQDGKLTRLPVVLDQYTPDMDRLPEFVLAL GNDVTWDDEKECFRTVASAVGNFYALHPPILPNPSGNGIHLYKKNRDSMADEHAENDLIS DENDVDQELLAEAEAAWAQREWTIQHVLFPSMRLFLKPPKSMATDGTFVQVASLEKLYKI FERC

Transcript Sequence

Transcript ID	Os01t0958900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42268937:42274900:1 gene:Os01g0958900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsMLH1 description:Similar to MLH1 protein (Fragment). (Os01t0958900-01);Similar to MLH1 protein (Fragment). (Os01t0958900-02)
Sequence	GAGTGAGTCCCGACCACGTCGCTGCCCTCGCCTCACCGCCGGCCAACCGCCGTGACGAGA GATCGAGCAGGGCGGGGCATGGACGAGCCTTCGCCGCGCGGAGGTGGGTGCGCCGGGGAG CCGCCCCGCATCCGGAGGTTGGAGGAGTCGGTGGTGAACCGCATCGCGGCGGGGGAGGTG ATCCAGCGGCCGTCGTCGGCGGTGAAGGAGCTCATCGAGAACAGCCTCGACGCTGGCGCC TCCAGCGTCTCCGTTGCGGTGAAGGACGGTGGCCTCAAGCTCATCCAGGTCTCCGATGAC GGCCATGGCATCAGGTTTGAGGATTTGGCAATATTGTGCGAAAGGCATACTACCTCAAAG TTATCTGCATACGAGGATCTGCAGACCATAAAATCGATGGGGTTCAGAGGGGAGGCTTTG GCTAGTATGACTTATGTTGGCCATGTTACCGTGACAACGATAACAGAAGGCCAATTGCAC GGCTACAGGGTTTCTTACAGAGATGGTGTAATGGAGAATGAGCCTAAGCCTTGCGCTGCG GTGAAAGGAACTCAAGTCATGGTTGAAAATCTATTTTACAACATGGTAGCCCGCAAGAAA ACATTGCAGAACTCCAATGATGACTACCCCAAGATCGTAGACTTCATCAGTCGGTTTGCA GTCCATCACATCAACGTTACCTTCTCTTGCAGAAAGCATGGAGCCAATAGAGCAGATGTT CATAGTGCAAGTACATCCTCAAGGTTAGATGCTATCAGGAGTGTCTATGGGGCTTCTGTC GTTCGTGATCTCATAGAAATAAAGGTTTCATATGAGGATGCTGCAGATTCAATCTTCAAG ATGGATGGTTACATCTCAAATGCAAATTATGTGGCAAAGAAGATTACAATGATTCTTTTC ATAAATGATAGGCTTGTAGACTGTACTGCTTTGAAAAGAGCTATTGAATTTGTGTACTCT GCAACATTGCCTCAAGCATCCAAACCTTTCATATACATGTCCATACATCTTCCATCAGAA CACGTGGATGTTAATATACACCCAACCAAGAAAGAGGTTAGCCTTTTGAATCAAGAGCGT ATTATTGAAACAATAAGAAATGCTATTGAGGAAAAACTGATGAATTCTAATACAACCAGG ATATTCCAAACTCAGGCATTAAACTTATCAGGGATTGCTCAAGCTAACCCACAAAAGGAT AAGGTTTCTGAGGCCAGTATGGGTTCTGGAACAAAATCTCAAAAAATTCCTGTGAGCCAA ATGGTCAGAACAGATCCACGCAATCCATCTGGAAGATTGCACACCTACTGGCACGGGCAA TCTTCAAATCTTGAAAAGAAATTTGATCTTGTATCTGTAAGAAATGTTGTAAGATCAAGG AGAAACCAAAAAGATGCTGGTGATTTGTCAAGCCGTCATGAGCTCCTTGTGGAAATAGAT TCTAGCTTCCATCCTGGCCTTTTGGACATTGTCAAGAACTGCACATATGTTGGACTTGCC GATGAAGCCTTTGCTTTGATACAACACAATACCCGCTTATACCTTGTAAATGTGGTAAAT ATTAGTAAAGAACTTATGTACCAGCAAGCTTTGTGCCGTTTTGGGAACTTCAATGCTATT CAGCTCAGTGAACCAGCTCCACTTCAGGAGTTGCTGGTGATGGCACTGAAAGACGATGAA TTGATGAGTGATGAAAAGGATGATGAGAAACTGGAGATTGCAGAAGTAAACACTGAGATA CTAAAAGAAAATGCTGAGATGATTAATGAGTACTTTTCTATTCACATTGATCAAGATGGC AAATTGACAAGACTTCCTGTTGTACTGGACCAGTACACCCCTGATATGGACCGTCTTCCA GAATTTGTGTTGGCTTTAGGAAATGATGTTACTTGGGATGACGAGAAAGAGTGCTTCAGA ACAGTAGCTTCTGCTGTAGGAAACTTCTATGCACTTCATCCCCCAATCCTTCCAAATCCA TCTGGGAATGGCATTCATTTATACAAGAAAAATAGAGATTCAATGGCTGATGAACATGCT GAGAATGATCTAATATCAGATGAAAATGACGTTGATCAAGAACTTCTTGCGGAAGCAGAA GCAGCATGGGCCCAACGTGAGTGGACCATTCAGCATGTCTTGTTTCCATCCATGCGACTT TTCCTCAAGCCCCCGAAGTCAATGGCAACAGATGGAACGTTTGTGCAGGTTGCTTCCTTG GAGAAACTCTACAAGATTTTTGAAAGGTGTTAGCTCATAAGTGAGAAAATGAAGGCAGAG TAAGATCATGATTCATGGAGTGTTTTTGAAAATGTGTATAATTTCACCGTATTATGTACT TTGATAGTGTCTGTAGAAACTGAAGAAAGAAAGATGGCTTTACTTCTGAATTGAAAGTTA ACGATGCCAGCAATTGTATATTCTGATCAAACATTGGCGTCTACTACTCTACTAGCAAGT GATCTTCCTTAGCTCCAGGTCGACAAGAATCAAGAATGTGTGTGTTGTACCCAATTTATT TAGCCAAAATGAAAAGGTATATTTTCTAAGTTC