Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0956600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:42149782:42156852:1 gene:Os01g0956600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os01t0956600-01)
Sequence	ATGGACCCAGATCAAGTGGAGATTCCCTTTAAAGTGCTTCAGGAGAGAGTCCCTGGTAAA AAGAAGTATTCCTTAAGGGTTATCAAACCTTCGTCCTCAAAGAAGATATGCAGAAGCGTT AACAGTTATCCCCTTGTCTGTCTGAAGAGGGAGATGGCAGATAATGATCATGTGCATTGC ATAATGCTTACGCTAAATCACCGAAACATTCTCTCAATGAAAGCCCTATCCAGGGACAAG GTTGAGAGCAATGGCCCCTCATCCTTAGCAGCATTTGTAGAGCCTTACACTGGACTGTTA TCATCACTTTGTTTTAAACATGATTGCTGGGGTGACAGAATAAACCACATTCCTTCACCA TTACTCCAGTCCTTATTAAGGCAAGTCATTGAGGGGCTTGACTTCTTGAGGAAGAACAAA CTGTATCATGGTAATCTCAATTGGGATTCGATTTTGTATCTTCAACCGTCTACCGTTAAG CTTGCTAACTTCAGAAAACAAGAGACAATGAGCTTGGAGGAAGCCCAGTGGGCCGATTGG TTGTGCCTTATTAAAATGCTTGAAGAAATTTTAGAAAGAGCTGCTGAAATAAGCTCAAAG CTTGCTCAATGTGATAGATATTTCTGCGGACATGTTGAATCTTTGACTGCTCTATTGAAA ACCCTGGATAAGACTGCATTGCCGGCAATTAAAGAAATTGTTCTTGGGCATCCTCTTTTT TGGGATTTGATGACGAGGGTAAACTTCTTTGCAAAGGATATATCACTTAGGTTGAATGAT GACACTTTTATGTCAAGAGTGAGAGCTTCAAAAATCCGTAAGCTTCCTTGGAATGAAGGA ACAACTCAAGACTTTAAAGGTCTCCTGTTTGAAATGGAAACCTATCGTAAAGATGAAGGA ATTCCAGCATATGACTTCAGAAGCTTAAAAGATTATGTACGCTGTGTCTGTGGTGCTTAT GCTCACTGGAATAAAATAAAGCTAAATGTTGACGACATTGTTCGGCAAAACCATCCTACC ATATGCAGTGATATCTGGCATCTTCTTGGAAGTTCAGACATGTCGCATGCTGATTCTAAG AAGCCAGTTGAAGAGATTAAATTAATATCTGATGTCGTTAGAGATTCACCACACAAGATT TTCATCGCTGGAATTCCTAGAGTGATTTCATCTAAGATGCTCAGGGATATAGTTAGTTCA TTTGGTCAATTGGCTGCTTACCGCTTTCTTTTTAATGAAGACCTTGGTGGAGCATGCGCA TTTCTTGAGTACATTGATCACTCCATTACATCAAAGGCATGTGCTGGCCTTAACGGCATG AAGCTTGGTGGATGCGTAATAACTGCTGTTGGCGTGTTAACTGATCATCCTGGGCAGGCT GGCAATGAAGCTTGCCCATTTCATGGAATTCCTGCCAATCCCAAACCTCTTCTTGCAGTA CCAACACAAGTCCTGCAGCTAAAAAATGTGTTTGACCAGGAGGAATACTCGCTGCTTTCA AAATATGAGGTAGATGCAGTATTGGAAGATGTACGTGTGAAGTGTGCAAGGTATGGAGCT GTGAAATCCATAAATGTCGTAGAGTATCCTGCTGGCAGTGACAACACCAAGGCACCTGCA GTAGATGCTAGAGACAACGCTTTGGCTTCTAACAACACTGCACTCGAAGCTGGCTGTATA CTTGTAGAGTTCTTGTGCAAGGAGGCTTCATTCATGGCTGCTCATTCACTCCATGGCCGG CCTTTTGGCAGCAGGATTGTCTCTGCGGGATATGCTCCATATGATCTCTTATCTCTACCG GAGGTATTTCCAGTGTTGAGATTCTGA

Peptide Sequence

PEP ID	Os01t0956600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:42149782:42156852:1 gene:Os01g0956600 transcript:Os01t0956600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os01t0956600-01)
Sequence	MDPDQVEIPFKVLQERVPGKKKYSLRVIKPSSSKKICRSVNSYPLVCLKREMADNDHVHC IMLTLNHRNILSMKALSRDKVESNGPSSLAAFVEPYTGLLSSLCFKHDCWGDRINHIPSP LLQSLLRQVIEGLDFLRKNKLYHGNLNWDSILYLQPSTVKLANFRKQETMSLEEAQWADW LCLIKMLEEILERAAEISSKLAQCDRYFCGHVESLTALLKTLDKTALPAIKEIVLGHPLF WDLMTRVNFFAKDISLRLNDDTFMSRVRASKIRKLPWNEGTTQDFKGLLFEMETYRKDEG IPAYDFRSLKDYVRCVCGAYAHWNKIKLNVDDIVRQNHPTICSDIWHLLGSSDMSHADSK KPVEEIKLISDVVRDSPHKIFIAGIPRVISSKMLRDIVSSFGQLAAYRFLFNEDLGGACA FLEYIDHSITSKACAGLNGMKLGGCVITAVGVLTDHPGQAGNEACPFHGIPANPKPLLAV PTQVLQLKNVFDQEEYSLLSKYEVDAVLEDVRVKCARYGAVKSINVVEYPAGSDNTKAPA VDARDNALASNNTALEAGCILVEFLCKEASFMAAHSLHGRPFGSRIVSAGYAPYDLLSLP EVFPVLRF

Transcript Sequence

Transcript ID	Os01t0956600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42149782:42156852:1 gene:Os01g0956600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os01t0956600-01)
Sequence	CCTCTTCCCCTCGTCGGCTCCTCTGACAAACCCCAGCAGGAGTACGGCACCGCCCTCCCG CCCGTCCGTCGCCGGCGAAACTAGGTCGTAACTTCCCAGCCGAGCAGCCCATCTCGGGTA GGAGGAGCTCAGCGCCGTCGACGCTCCCCGGCGGGCTTCAATTTCGGTCGCCGGCGACAA GTACTACAGTTAAGCTCCTTGATATTCTGATAACAAACAAGGCAGCTGCAAAGGCTATAT TCATCAAAATGGACCCAGATCAAGTGGAGATTCCCTTTAAAGTGCTTCAGGAGAGAGTCC CTGGTAAAAAGAAGTATTCCTTAAGGGTTATCAAACCTTCGTCCTCAAAGAAGATATGCA GAAGCGTTAACAGTTATCCCCTTGTCTGTCTGAAGAGGGAGATGGCAGATAATGATCATG TGCATTGCATAATGCTTACGCTAAATCACCGAAACATTCTCTCAATGAAAGCCCTATCCA GGGACAAGGTTGAGAGCAATGGCCCCTCATCCTTAGCAGCATTTGTAGAGCCTTACACTG GACTGTTATCATCACTTTGTTTTAAACATGATTGCTGGGGTGACAGAATAAACCACATTC CTTCACCATTACTCCAGTCCTTATTAAGGCAAGTCATTGAGGGGCTTGACTTCTTGAGGA AGAACAAACTGTATCATGGTAATCTCAATTGGGATTCGATTTTGTATCTTCAACCGTCTA CCGTTAAGCTTGCTAACTTCAGAAAACAAGAGACAATGAGCTTGGAGGAAGCCCAGTGGG CCGATTGGTTGTGCCTTATTAAAATGCTTGAAGAAATTTTAGAAAGAGCTGCTGAAATAA GCTCAAAGCTTGCTCAATGTGATAGATATTTCTGCGGACATGTTGAATCTTTGACTGCTC TATTGAAAACCCTGGATAAGACTGCATTGCCGGCAATTAAAGAAATTGTTCTTGGGCATC CTCTTTTTTGGGATTTGATGACGAGGGTAAACTTCTTTGCAAAGGATATATCACTTAGGT TGAATGATGACACTTTTATGTCAAGAGTGAGAGCTTCAAAAATCCGTAAGCTTCCTTGGA ATGAAGGAACAACTCAAGACTTTAAAGGTCTCCTGTTTGAAATGGAAACCTATCGTAAAG ATGAAGGAATTCCAGCATATGACTTCAGAAGCTTAAAAGATTATGTACGCTGTGTCTGTG GTGCTTATGCTCACTGGAATAAAATAAAGCTAAATGTTGACGACATTGTTCGGCAAAACC ATCCTACCATATGCAGTGATATCTGGCATCTTCTTGGAAGTTCAGACATGTCGCATGCTG ATTCTAAGAAGCCAGTTGAAGAGATTAAATTAATATCTGATGTCGTTAGAGATTCACCAC ACAAGATTTTCATCGCTGGAATTCCTAGAGTGATTTCATCTAAGATGCTCAGGGATATAG TTAGTTCATTTGGTCAATTGGCTGCTTACCGCTTTCTTTTTAATGAAGACCTTGGTGGAG CATGCGCATTTCTTGAGTACATTGATCACTCCATTACATCAAAGGCATGTGCTGGCCTTA ACGGCATGAAGCTTGGTGGATGCGTAATAACTGCTGTTGGCGTGTTAACTGATCATCCTG GGCAGGCTGGCAATGAAGCTTGCCCATTTCATGGAATTCCTGCCAATCCCAAACCTCTTC TTGCAGTACCAACACAAGTCCTGCAGCTAAAAAATGTGTTTGACCAGGAGGAATACTCGC TGCTTTCAAAATATGAGGTAGATGCAGTATTGGAAGATGTACGTGTGAAGTGTGCAAGGT ATGGAGCTGTGAAATCCATAAATGTCGTAGAGTATCCTGCTGGCAGTGACAACACCAAGG CACCTGCAGTAGATGCTAGAGACAACGCTTTGGCTTCTAACAACACTGCACTCGAAGCTG GCTGTATACTTGTAGAGTTCTTGTGCAAGGAGGCTTCATTCATGGCTGCTCATTCACTCC ATGGCCGGCCTTTTGGCAGCAGGATTGTCTCTGCGGGATATGCTCCATATGATCTCTTAT CTCTACCGGAGGTATTTCCAGTGTTGAGATTCTGATGTACTCCACTTTTTTCAAGGGAAA AATTCTGATGTACTGATGGAGCTAAAGCTTGCGTATTCCCCAACACGAAGTACCTTGTAG CTTTGGTCTGTTGGATGCATAAGCGTGAAACTAGTTTTCAATCAGAATTGATACAAGGGA ACAAGGGAACAAGTACTTGTTCCTTGGGATGAAATATTGGATACACGTGATCAGTAACCA TTTTATCTGAAGTCACAGCATTTTTCTC