Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0955400-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:42078682:42079137:-1 gene:Os01g0955400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 23 description:Similar to cDNA clone:001-105-G04, full insert sequence. (Os01t0955400-00)
Sequence

ATGGTTGCCTCCGACGAGTTCAGGCGCGTCTTTGGATCGTTCGACCAGGACGGCGACGGC
AAGATCTCCGCCACCGAGCTGCGGCTCTGCGTGAAGGCGTCCCTCGGCGAGGACATGCCG
GACGAGGAGGTGCAGGCGCTCATGGCGTTGGCGGACACCGACGGCGACGGGTTGCTGGAC
GAAGAGGAGTTCGTGAGGCTGGTGACAGAAATGGAGGCGGATGGTGATGAGGAAGAAGAC
GACGACGACGAGACGTGCAGGTGCCTAAGGGAGGCGTTTGCGATGTACGAGATGGAAGGG
AGAGGATGCATCACGCCGCTGAGCCTGAAGCTGATGCTGAGCAAGCTGGGCACGCACCTG
GACGTTGCAGAGTGCCAGGCCATGATCTGCAGGTTCGACATGAACGGAGACGGGGTGCTC
ACCTTCGACGAGTTCAAGACTATGATGATGGCCTGA

Peptide Sequence

PEP ID

Os01t0955400-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:42078682:42079137:-1 gene:Os01g0955400 transcript:Os01t0955400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 23 description:Similar to cDNA clone:001-105-G04, full insert sequence. (Os01t0955400-00)
Sequence

MVASDEFRRVFGSFDQDGDGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLD
EEEFVRLVTEMEADGDEEEDDDDETCRCLREAFAMYEMEGRGCITPLSLKLMLSKLGTHL
DVAECQAMICRFDMNGDGVLTFDEFKTMMMA

Transcript Sequence

Transcript ID

Os01t0955400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42078682:42079137:-1 gene:Os01g0955400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 23 description:Similar to cDNA clone:001-105-G04, full insert sequence. (Os01t0955400-00)
Sequence

ATGGTTGCCTCCGACGAGTTCAGGCGCGTCTTTGGATCGTTCGACCAGGACGGCGACGGC
AAGATCTCCGCCACCGAGCTGCGGCTCTGCGTGAAGGCGTCCCTCGGCGAGGACATGCCG
GACGAGGAGGTGCAGGCGCTCATGGCGTTGGCGGACACCGACGGCGACGGGTTGCTGGAC
GAAGAGGAGTTCGTGAGGCTGGTGACAGAAATGGAGGCGGATGGTGATGAGGAAGAAGAC
GACGACGACGAGACGTGCAGGTGCCTAAGGGAGGCGTTTGCGATGTACGAGATGGAAGGG
AGAGGATGCATCACGCCGCTGAGCCTGAAGCTGATGCTGAGCAAGCTGGGCACGCACCTG
GACGTTGCAGAGTGCCAGGCCATGATCTGCAGGTTCGACATGAACGGAGACGGGGTGCTC
ACCTTCGACGAGTTCAAGACTATGATGATGGCCTGA