Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0955000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:42063261:42067784:-1 gene:Os01g0955000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NON-SPECIFIC PHOSPHOLIPASE C2 description:Phosphoesterase family protein. (Os01t0955000-02);Similar to phosphoesterase family protein. (Os01t0955000-03)
Sequence	ATGGCGGTTCGCCGCCGGCGACCCGGCCCCGTGGCGGCCGCCGTGCTGCTGCTACTCGCG GTGGCGACCCAGGCGGCGGCGAGCCCGATAAAGACGGTGGTGGTGGTGGTGATGGAGAAC CGGTCGTTCGACCACATGCTGGGGTGGATGAAGCGGCTGAACCCGGAGATCGACGGCGTG ACCGGCGGCGAGTGGAACCCGACGAACGCCAGCGACCCGTCGTCGGGGCGCGTCTACTTC GGCGAGGGCGCCGAGTACGTGGACCCAGACCCGGGCCACTCGTTCCAGGAGATCCGGCAG CAGATATTCGGGTCGGACGACGCGTCGGGGCCGGCGAGGATGGACGGCTTCGTGCAGCAG GCGCGGTCGCTGGGGGACAACATGACGGCGGCCGTCATGAACGGCTTCTCGCCGGACAGC GTCGCCGTGTACCGGGAGCTCGTCGGGGAGTTCGCGGTGTTCGACCGGTGGTTCGCGTCC GTGCCGTCGTCGACGCAGCCCAACCGACTGTTCGTGCACTCCGCCACATCCGGCGGCGCC ACCAGCAACAACCCAGAGCTGCTGGCGAAGGGCTACCCGCAGCGTACAATCTTCGACAAC GTGCACGACGCCGGGCTGTCGTTCGGGGTCTACTACCAGGACGTGCCGGCGGTGCTCTTC TACCGCAACCTGCGGAAGCTCAAGTACCTGACCAAGTTCCACCCGTTCCACGGCGCGTTC CGCGACCACGCCGCCCGCGGCTCCCTCCCAAACTACGCCGTGGTGGAGCAGCACTACATG GACTCCAAGTCCCACCCGGCCAACGACGACCACCCGTCGCACGACGTCTTCCAGGGCCAG ATGCTCGTCAAGGAGGTGTACGAGACGCTCCGCGCCAGCCCGCAGTGGAACCAGACGCTC ATGGTCGTCACCTACGACGAGCACGGCGGCTTCTACGACCATGTCCCCACCCCCGTCACC GGCGTCCCCAGCCCCGACGGCATCGTCGGCCCGCCGCCGTATAACTTCGCCTTTGATCGC CTCGGCGTCCGTGTCCCAGCCATCGTCATCTCCCCCTGGATCAACAAGGGTACAGTTGTT CATGGGCCAAACGGGAGCCCAACCGCGACGTCGGAGTACGAGCACTCGTCCATCCCCGCG ACCGTGAAGAAACTCTTCGATCTGCCACAGGATTTCCTGACTAAAAGGGACGCCTGGGCT GGAACGTTTGAGAGTGTCGTGCAAGGCAGAACTGAGCCAAGGACGGATTGCCCAGAGCAA CTCCCAATGCCGATGAGGATACGGCTGACGGAGGCGAACGAGGAGGCGAAGCTGAGTGAG TTCCAGCAGGAGCTGGTTCAGCTGGCGTCGGTGCTCAACGGGGACCACCAGCTGAGCAGC CTGCAGGACACGATCAGGGACAGGATGAACGTCAGGGAAGGCATCGCGTACATGCGGGGC GCTGTAAAGCGCTTCTTCGAGACCGGCATGTCAGCCAAGAGGATGGGCGTCGACGACGAG CAGATCGTCAAGATGAGGCCATCGCTCACCACCAGGACATCCCCTGCGATCGAGCAACCA TAG

Peptide Sequence

PEP ID	Os01t0955000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:42063261:42067784:-1 gene:Os01g0955000 transcript:Os01t0955000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NON-SPECIFIC PHOSPHOLIPASE C2 description:Phosphoesterase family protein. (Os01t0955000-02);Similar to phosphoesterase family protein. (Os01t0955000-03)
Sequence	MAVRRRRPGPVAAAVLLLLAVATQAAASPIKTVVVVVMENRSFDHMLGWMKRLNPEIDGV TGGEWNPTNASDPSSGRVYFGEGAEYVDPDPGHSFQEIRQQIFGSDDASGPARMDGFVQQ ARSLGDNMTAAVMNGFSPDSVAVYRELVGEFAVFDRWFASVPSSTQPNRLFVHSATSGGA TSNNPELLAKGYPQRTIFDNVHDAGLSFGVYYQDVPAVLFYRNLRKLKYLTKFHPFHGAF RDHAARGSLPNYAVVEQHYMDSKSHPANDDHPSHDVFQGQMLVKEVYETLRASPQWNQTL MVVTYDEHGGFYDHVPTPVTGVPSPDGIVGPPPYNFAFDRLGVRVPAIVISPWINKGTVV HGPNGSPTATSEYEHSSIPATVKKLFDLPQDFLTKRDAWAGTFESVVQGRTEPRTDCPEQ LPMPMRIRLTEANEEAKLSEFQQELVQLASVLNGDHQLSSLQDTIRDRMNVREGIAYMRG AVKRFFETGMSAKRMGVDDEQIVKMRPSLTTRTSPAIEQP

Transcript Sequence

Transcript ID	Os01t0955000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42063261:42067784:-1 gene:Os01g0955000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NON-SPECIFIC PHOSPHOLIPASE C2 description:Phosphoesterase family protein. (Os01t0955000-02);Similar to phosphoesterase family protein. (Os01t0955000-03)
Sequence	GGGTCCATCACGAGCTCCCCTCCCCACACACCACCTCACTCCCACTACGAGAGAGGAGGA AGCTCGCAATCATCGAATCAATGGCGGTTCGCCGCCGGCGACCCGGCCCCGTGGCGGCCG CCGTGCTGCTGCTACTCGCGGTGGCGACCCAGGCGGCGGCGAGCCCGATAAAGACGGTGG TGGTGGTGGTGATGGAGAACCGGTCGTTCGACCACATGCTGGGGTGGATGAAGCGGCTGA ACCCGGAGATCGACGGCGTGACCGGCGGCGAGTGGAACCCGACGAACGCCAGCGACCCGT CGTCGGGGCGCGTCTACTTCGGCGAGGGCGCCGAGTACGTGGACCCAGACCCGGGCCACT CGTTCCAGGAGATCCGGCAGCAGATATTCGGGTCGGACGACGCGTCGGGGCCGGCGAGGA TGGACGGCTTCGTGCAGCAGGCGCGGTCGCTGGGGGACAACATGACGGCGGCCGTCATGA ACGGCTTCTCGCCGGACAGCGTCGCCGTGTACCGGGAGCTCGTCGGGGAGTTCGCGGTGT TCGACCGGTGGTTCGCGTCCGTGCCGTCGTCGACGCAGCCCAACCGACTGTTCGTGCACT CCGCCACATCCGGCGGCGCCACCAGCAACAACCCAGAGCTGCTGGCGAAGGGCTACCCGC AGCGTACAATCTTCGACAACGTGCACGACGCCGGGCTGTCGTTCGGGGTCTACTACCAGG ACGTGCCGGCGGTGCTCTTCTACCGCAACCTGCGGAAGCTCAAGTACCTGACCAAGTTCC ACCCGTTCCACGGCGCGTTCCGCGACCACGCCGCCCGCGGCTCCCTCCCAAACTACGCCG TGGTGGAGCAGCACTACATGGACTCCAAGTCCCACCCGGCCAACGACGACCACCCGTCGC ACGACGTCTTCCAGGGCCAGATGCTCGTCAAGGAGGTGTACGAGACGCTCCGCGCCAGCC CGCAGTGGAACCAGACGCTCATGGTCGTCACCTACGACGAGCACGGCGGCTTCTACGACC ATGTCCCCACCCCCGTCACCGGCGTCCCCAGCCCCGACGGCATCGTCGGCCCGCCGCCGT ATAACTTCGCCTTTGATCGCCTCGGCGTCCGTGTCCCAGCCATCGTCATCTCCCCCTGGA TCAACAAGGGTACAGTTGTTCATGGGCCAAACGGGAGCCCAACCGCGACGTCGGAGTACG AGCACTCGTCCATCCCCGCGACCGTGAAGAAACTCTTCGATCTGCCACAGGATTTCCTGA CTAAAAGGGACGCCTGGGCTGGAACGTTTGAGAGTGTCGTGCAAGGCAGAACTGAGCCAA GGACGGATTGCCCAGAGCAACTCCCAATGCCGATGAGGATACGGCTGACGGAGGCGAACG AGGAGGCGAAGCTGAGTGAGTTCCAGCAGGAGCTGGTTCAGCTGGCGTCGGTGCTCAACG GGGACCACCAGCTGAGCAGCCTGCAGGACACGATCAGGGACAGGATGAACGTCAGGGAAG GCATCGCGTACATGCGGGGCGCTGTAAAGCGCTTCTTCGAGACCGGCATGTCAGCCAAGA GGATGGGCGTCGACGACGAGCAGATCGTCAAGATGAGGCCATCGCTCACCACCAGGACAT CCCCTGCGATCGAGCAACCATAGAAATAGAAACAAGAGCAATAGAAGCAAATAAGGATAC AGGTTTATTTTATATGCTGAAAAAGAAAAAAAATCATGGTGCTTGCATATATGTAGCAGA GCCAGCAAGGAGTGCTTTGTTCTAGAATTAGTTGAGATCTCTCATGGATCGATCTATATA CATGGCCGGGCTGTACTGTACAAATTGATGAAACGTTAATTATTGGCTTAGTATACAGAT CGATCGATTGC