Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0954400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:42025709:42027877:1 gene:Os01g0954400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor. (Os01t0954400-01)
Sequence	ATGGCCGCCGCCGCCGCCGCCGCCGCTTCCGCCTCCTCCTCGTCGTCGTCCTCCTCCTCG GCCGAATCCGTCCCCCTCCCCACCACGACTCTCCCCATCGACAAGGCGGCGGCTGTAGGC GGCGGTGGCGACCGGGCGGTGGATTGCGGGGTGTGCGCGATTTGCCTGGATAAGATCGCC CTGCAGGAGACGGCCCTCGTCAAGGGATGCGACCACGCCTACTGTGTGACGTGCATTCTG AGGTGGGCGTCCTACAAACAGACGCCTCAATGCCCACAGTGCAAACATCCGTTTGATTTC CTCAGCGTGCACCGCTCTCTCGATGGCTGTATTCATGACTACATGTTCGAGGAAAGCGTT TGCCTTCTCCTGAGGGCCACTTGGTTTGAACCTCTGATCGTAGAGGCTCACGAAGAGGCT CTGGATGAAGAAGAGTTATACCACATCTATCAATATGATGATGGCGTTGAAGATGACCTT GACGAGGAAGCTTATTACATGAGCAGGTCTCCGAGCATTCGAATTGGCAACAGGAGGTGG GGTGACAATGGATATGTCAGAGGAGGCAGGAAAGAGGCAAGGCCAGTGAGTCGCCAGTCC TTGAATGACACTGATGCTGGTCCATCCAGGACTCCCAAGAAGAAAGATGTATCAGCATCG GGATCAGGTTCTGTGTCTAAGGAAGTTGCAGGAAGACGAGCAAAACGAGCTCTGAAGCGT GAAGCTGCTGATAAGGCAGCTGCAGAAAAGCACTTGAAGCACCTCCAGAGGTTGGGCCTC AGGAAGGCACCCGAAGCAACAGCTGAAGCAACTCCAGAGGTTGAACCTCAGCTGAACGAG TGA

Peptide Sequence

PEP ID	Os01t0954400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:42025709:42027877:1 gene:Os01g0954400 transcript:Os01t0954400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor. (Os01t0954400-01)
Sequence	MAAAAAAAASASSSSSSSSSAESVPLPTTTLPIDKAAAVGGGGDRAVDCGVCAICLDKIA LQETALVKGCDHAYCVTCILRWASYKQTPQCPQCKHPFDFLSVHRSLDGCIHDYMFEESV CLLLRATWFEPLIVEAHEEALDEEELYHIYQYDDGVEDDLDEEAYYMSRSPSIRIGNRRW GDNGYVRGGRKEARPVSRQSLNDTDAGPSRTPKKKDVSASGSGSVSKEVAGRRAKRALKR EAADKAAAEKHLKHLQRLGLRKAPEATAEATPEVEPQLNE

Transcript Sequence

Transcript ID	Os01t0954400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:42025709:42027877:1 gene:Os01g0954400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor. (Os01t0954400-01)
Sequence	GCGAAGGGCCCCCCTTCCTCCTCTCCTCTCACCACACACCACCCGAAAAACACCGGAGGA ATATTCCCCACCTCGCCTCTCTCCAGCCACCGACATGGCCGCCGCCGCCGCCGCCGCCGC TTCCGCCTCCTCCTCGTCGTCGTCCTCCTCCTCGGCCGAATCCGTCCCCCTCCCCACCAC GACTCTCCCCATCGACAAGGCGGCGGCTGTAGGCGGCGGTGGCGACCGGGCGGTGGATTG CGGGGTGTGCGCGATTTGCCTGGATAAGATCGCCCTGCAGGAGACGGCCCTCGTCAAGGG ATGCGACCACGCCTACTGTGTGACGTGCATTCTGAGGTGGGCGTCCTACAAACAGACGCC TCAATGCCCACAGTGCAAACATCCGTTTGATTTCCTCAGCGTGCACCGCTCTCTCGATGG CTGTATTCATGACTACATGTTCGAGGAAAGCGTTTGCCTTCTCCTGAGGGCCACTTGGTT TGAACCTCTGATCGTAGAGGCTCACGAAGAGGCTCTGGATGAAGAAGAGTTATACCACAT CTATCAATATGATGATGGCGTTGAAGATGACCTTGACGAGGAAGCTTATTACATGAGCAG GTCTCCGAGCATTCGAATTGGCAACAGGAGGTGGGGTGACAATGGATATGTCAGAGGAGG CAGGAAAGAGGCAAGGCCAGTGAGTCGCCAGTCCTTGAATGACACTGATGCTGGTCCATC CAGGACTCCCAAGAAGAAAGATGTATCAGCATCGGGATCAGGTTCTGTGTCTAAGGAAGT TGCAGGAAGACGAGCAAAACGAGCTCTGAAGCGTGAAGCTGCTGATAAGGCAGCTGCAGA AAAGCACTTGAAGCACCTCCAGAGGTTGGGCCTCAGGAAGGCACCCGAAGCAACAGCTGA AGCAACTCCAGAGGTTGAACCTCAGCTGAACGAGTGATTTTCACCAACTTCTGTAGATAA TGGTGCTGTGAAGAAAACTGCAGCCCTTGGGTCACCCGAATAATCTTCCATTGTGAAGGA CTGGAGCGTGGCCTTGTATCGTTGGCAAACTTGCCGATTTGTACAGTACTTTAGTTTCAC AAATTACTCGTAGCATTGAACTGCACATCAGTCTGCACCAGATGCGGCGATGCAATGCGG TTTACCTCAATCTGATAATACTTTCAGTTACCGGGATTCCTCTGCATGATGCAGAGGACC CTGAACTAGGAGAATGTCAGTTGCTAGCTCTGCTAGTATTCTGTGCTGCAATGTATCAGT TTAGATAG