Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0954000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:42018073:42019444:1 gene:Os01g0954000 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADPH-dependent FMN reductase family protein. (Os01t0954000-01)
Sequence

ATGGAAGGCTCGACGTCACCGAAGGCGTTGAGAGTTGCGGCGATCTCCGGCTCGCTGCGG
AGGGGCTCCGCCAACACCGGCCTCATCCGCGCCGCCAAGGAGATATGCGAGGAGTCCATC
CCGGGGATGGTTATTGACCACGTCGACATCCCCGACCTGCCGCTGCTCAACACCGACATG
GAGGTTGACGACGGCTTCCCGCCGGCCGTCGAGGCGTTCCGGGCCAGTGTCCGCGCTGCC
GACTGCTTCCTCTTCGCCTCTCCCGAGTACAACTACTCCATCTCAGGTCCTCTGAAGAAC
GCGTTGGACTGGGGATCAAGGCCGCCCAACTGCTGGGCTGACAGAGCCGCCGCCATCGTG
AGCGCGTCCGGAGGCTCCGGTGGCAGCCGATCAATGTACCACATCAGGCAAGTCGGGGTT
TTCTTGGACATCCATTTCATCAACAAGCCTGAAGTGTTCATCAAAGCACATCAGCCTCCG
AAAAAATTCGACAGCGATGGCAATTTGATTGATCCGGAGATTAAAGAAGAGCTCAAGGAT
ATGCTCCTGTCACTGCAAGCTTTCGCCCTGAGGCTCCAGGGCAAACCTGCAAACTCTAAA
CATGCAGCTTAA

Peptide Sequence

PEP ID

Os01t0954000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:42018073:42019444:1 gene:Os01g0954000 transcript:Os01t0954000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADPH-dependent FMN reductase family protein. (Os01t0954000-01)
Sequence

MEGSTSPKALRVAAISGSLRRGSANTGLIRAAKEICEESIPGMVIDHVDIPDLPLLNTDM
EVDDGFPPAVEAFRASVRAADCFLFASPEYNYSISGPLKNALDWGSRPPNCWADRAAAIV
SASGGSGGSRSMYHIRQVGVFLDIHFINKPEVFIKAHQPPKKFDSDGNLIDPEIKEELKD
MLLSLQAFALRLQGKPANSKHAA

Transcript Sequence

Transcript ID

Os01t0954000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42018073:42019444:1 gene:Os01g0954000 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADPH-dependent FMN reductase family protein. (Os01t0954000-01)
Sequence

AATCACGCACTAAACCGATCCCAAGAAAATGGAAGGCTCGACGTCACCGAAGGCGTTGAG
AGTTGCGGCGATCTCCGGCTCGCTGCGGAGGGGCTCCGCCAACACCGGCCTCATCCGCGC
CGCCAAGGAGATATGCGAGGAGTCCATCCCGGGGATGGTTATTGACCACGTCGACATCCC
CGACCTGCCGCTGCTCAACACCGACATGGAGGTTGACGACGGCTTCCCGCCGGCCGTCGA
GGCGTTCCGGGCCAGTGTCCGCGCTGCCGACTGCTTCCTCTTCGCCTCTCCCGAGTACAA
CTACTCCATCTCAGGTCCTCTGAAGAACGCGTTGGACTGGGGATCAAGGCCGCCCAACTG
CTGGGCTGACAGAGCCGCCGCCATCGTGAGCGCGTCCGGAGGCTCCGGTGGCAGCCGATC
AATGTACCACATCAGGCAAGTCGGGGTTTTCTTGGACATCCATTTCATCAACAAGCCTGA
AGTGTTCATCAAAGCACATCAGCCTCCGAAAAAATTCGACAGCGATGGCAATTTGATTGA
TCCGGAGATTAAAGAAGAGCTCAAGGATATGCTCCTGTCACTGCAAGCTTTCGCCCTGAG
GCTCCAGGGCAAACCTGCAAACTCTAAACATGCAGCTTAAGCGGGTTTTCAGAAAAAAAA
ACTGGATGAATAGAACTCATTGGATTCTAGGACAACTTATCTTAACGCCGAACAATTGTG
TAGCCGTGATTTGAACGGTAGCTTAAATAAATCTTTTGGTTGTGT