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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0953801-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:42012784:42013581:1 gene:Os01g0953801 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF296 domain containing protein. (Os01t0953801-00)
Sequence

ATGGCCGACGAGGGGTCGTCGCGCGCCGAGCTGATCGAGGCTTCGCCGGCGCCGGCGCTG
GACCTTCCGTCGCCGCCGCGGAAGCCGCGGGGCCGGCCGCTGGGGTCCAAGAACAAGCCC
AAGCCGCCGGTGGTCGTGACGCGGGAGAGCGAGGCGGCGATGCGGCCCGTCGTGCTGGAG
CTCGGCGCCGGCTGCGAGGTGGCCGCCGCGGTGGCCGCGTTCGCGCGGCGCCGACGCGTC
GGCGTGTCCGTGCTCTGCGGCCGCGGCACCGTCGCCGCCGTCACGCTCCGGCTCCCGACC
TCGCCGCCCGCCGCGGTGAAGCTGCACGGGCGGTTCGAGGTGCTGTCCCTGTCCGGGACG
GTGCTGCCGTCCGCGGCCGGAGAGGGGGCCGCGCCGCCGCCGCCGTTCTCGGTGTCTCTA
GCTGGGGCGGGCGGGCAGGTGATCGGCGGCACGCTCGCCGGGGAGATGACGACGGCGGAC
GGGTTGGTGGTGGTGGCCGCCACGTTCGGGAGCGCCGAGGTGCACCGGTTGCCCGCTGAT
GAGGACGACGAGGCCACCGGCAGCCGCGGCGGTGAGGAGCGGAGGCATCCACAGCAGCAG
CCGCCGCAGACGGTGGCGGCCACGAGCGCCGTCGACGTGGGGCTGCTTGGGTACGGCGGC
GGTGTGGGGGTTGCCGGCGGTGCGAGTGGCGGGCAGGTGGGCCGCCACCAGCAGCAGCAG
CAGCAGGCCGAGATGGTCTTGTGGGCCCAGTCGCCAGGCTCAGTCGGCCCGGCCCATCCT
GCCACGAGTCGTTACTAG

Peptide Sequence

PEP ID

Os01t0953801-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:42012784:42013581:1 gene:Os01g0953801 transcript:Os01t0953801-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF296 domain containing protein. (Os01t0953801-00)
Sequence

MADEGSSRAELIEASPAPALDLPSPPRKPRGRPLGSKNKPKPPVVVTRESEAAMRPVVLE
LGAGCEVAAAVAAFARRRRVGVSVLCGRGTVAAVTLRLPTSPPAAVKLHGRFEVLSLSGT
VLPSAAGEGAAPPPPFSVSLAGAGGQVIGGTLAGEMTTADGLVVVAATFGSAEVHRLPAD
EDDEATGSRGGEERRHPQQQPPQTVAATSAVDVGLLGYGGGVGVAGGASGGQVGRHQQQQ
QQAEMVLWAQSPGSVGPAHPATSRY

Transcript Sequence

Transcript ID

Os01t0953801-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:42012784:42013581:1 gene:Os01g0953801 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF296 domain containing protein. (Os01t0953801-00)
Sequence

ATGGCCGACGAGGGGTCGTCGCGCGCCGAGCTGATCGAGGCTTCGCCGGCGCCGGCGCTG
GACCTTCCGTCGCCGCCGCGGAAGCCGCGGGGCCGGCCGCTGGGGTCCAAGAACAAGCCC
AAGCCGCCGGTGGTCGTGACGCGGGAGAGCGAGGCGGCGATGCGGCCCGTCGTGCTGGAG
CTCGGCGCCGGCTGCGAGGTGGCCGCCGCGGTGGCCGCGTTCGCGCGGCGCCGACGCGTC
GGCGTGTCCGTGCTCTGCGGCCGCGGCACCGTCGCCGCCGTCACGCTCCGGCTCCCGACC
TCGCCGCCCGCCGCGGTGAAGCTGCACGGGCGGTTCGAGGTGCTGTCCCTGTCCGGGACG
GTGCTGCCGTCCGCGGCCGGAGAGGGGGCCGCGCCGCCGCCGCCGTTCTCGGTGTCTCTA
GCTGGGGCGGGCGGGCAGGTGATCGGCGGCACGCTCGCCGGGGAGATGACGACGGCGGAC
GGGTTGGTGGTGGTGGCCGCCACGTTCGGGAGCGCCGAGGTGCACCGGTTGCCCGCTGAT
GAGGACGACGAGGCCACCGGCAGCCGCGGCGGTGAGGAGCGGAGGCATCCACAGCAGCAG
CCGCCGCAGACGGTGGCGGCCACGAGCGCCGTCGACGTGGGGCTGCTTGGGTACGGCGGC
GGTGTGGGGGTTGCCGGCGGTGCGAGTGGCGGGCAGGTGGGCCGCCACCAGCAGCAGCAG
CAGCAGGCCGAGATGGTCTTGTGGGCCCAGTCGCCAGGCTCAGTCGGCCCGGCCCATCCT
GCCACGAGTCGTTACTAG