Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0952700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:41964153:41970108:1 gene:Os01g0952700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metal-dependent hydrolase, composite domain containing protein. (Os01t0952700-01)
Sequence	ATGTCCACCCGGAGCGCCTTCCTCGCCGCCGGCGTTGCCATCGCCGCCGCCATCTTCCTC CTCCGCCCTGCTTCCGACCTGTCGAGGGATTTGGGGGAAGCCGTCGCTGACATGATACTG GCCAATGCCACCATCTACACCGCCGACCCCGCAATGCCGTTCGCCGAAGCCATGGCCGTA CGCGCCGGCCGCGTGCTCCGCGTGGGCGGATACTACTCTGTTAAGGAGTTGAAGGGTAGA CACACAATGGAGTTGAATCTTAGTGGAAATGTTGTTCTTCCGGGATTCATTGATTCCCAT GTGCACTTCATTGATGGTGGGTTGCAGTTAGCGCGGGTGCCACTTCGAGGGGTTACAAGC AAAGATGATTTCATCAACAGGGTCAAGGAAGCTGTCAAAGATAAGCATCCTGGGCAATGG ATATTTGGAGGAGGTTGGAACAATGATTTTTGGGGAGGTGATTACCCCACTGCTGCTTGG TTGGATGATATATCTCCTGATAATCCTGTCTGGCTTTCACGCATGGATGGACATATGGGA ATAGCCAATTCACTAGCTATGAGAATGGCTGGGATCAACAAAAACACAAACAATCCAGTT GGTGGAACTATTATGAGAACAACTGAAGGAGAGCCTACCGGTCTTCTAGTTGATGCTGCT ATGAAGCTTGTGTTTGATGTTATCTCAGAAGTCTCTATCCATGAAAGGAGAGATGCTCTT CTTAGGGCAAGTAGACACGCCCTAATGAGGGGGGTGACTACTGTTGTTGATGTTGGAAGT TATTTCCCTGGAAAGTCAGAAAAGCAAGTCTGGCAAGATTTTACAGATATATATGAATGG GCTCATTCTGTCGAAACAATGATTATGAGAGTTTGCTTATTCTTCCCCATGCCCACATGG TCTCGTGTTTATGACCTTATCCATGAAAAAGGTCGGATGTTAAGTCAATGGATTCATCTA GGTGGTGTTAAAGCTTTCCTTGATGGTTCTTTGGGTTCTTCCAGTGCTTTATTCTATGAG CACTACAAGGATGATCCTAGAAGTTATGGTCTCCAATTGGTTGACATGGATTATCTGCTC AATACAACATTAGAATTAGACAAATCAGGACTACAGATTGCCATACATGCAATTGGAGAT AAAGCCAATGATATGCTACTCGATATGTATGAGAAGGTGGTTGATTTGAATGGAATGAAG GATCATAGATTCCGGATTGAGCATGCTCAACACCTTGCTCCCGGTGCAGCCAAGCGCTTT GGCAAACATGGTATTATTGCATCTGTGCAGCCTGATCATATATTAGATGATGCCAATTCT GCTGGGAAGAAAATTGGGATAGAACGAGCTGAGCGAAGCTCCTATTCTTTTCGGTCACTA TTAGATGGTGGTGCACATCTGGCTTTTGGTTCTGATTGGCCTGTTTCAGATATTAATCCA TTACAAGCTATTCGAACTGCAGTATCCCGCAAACCTGTTGGATGGGAAGTCCCTTGGATC CCTGCGGAACGCTTATCTCTAGATGATTCTCTGAAAGCACATACTATATCTGCCGCCTAT GCCTGCTTCCTTGACCATGTTTTGGGCAGCCTATCTGAAGGAAAGTACGCCGATTTTGTG ATCCTGCCTAGCACATCATGGAACGAGTTCGGCAGCGACATAACGGACCACGTCTTGGCA ACATATGTGAACGGCAAGCAGGCCTATCCATGA

Peptide Sequence

PEP ID	Os01t0952700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:41964153:41970108:1 gene:Os01g0952700 transcript:Os01t0952700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metal-dependent hydrolase, composite domain containing protein. (Os01t0952700-01)
Sequence	MSTRSAFLAAGVAIAAAIFLLRPASDLSRDLGEAVADMILANATIYTADPAMPFAEAMAV RAGRVLRVGGYYSVKELKGRHTMELNLSGNVVLPGFIDSHVHFIDGGLQLARVPLRGVTS KDDFINRVKEAVKDKHPGQWIFGGGWNNDFWGGDYPTAAWLDDISPDNPVWLSRMDGHMG IANSLAMRMAGINKNTNNPVGGTIMRTTEGEPTGLLVDAAMKLVFDVISEVSIHERRDAL LRASRHALMRGVTTVVDVGSYFPGKSEKQVWQDFTDIYEWAHSVETMIMRVCLFFPMPTW SRVYDLIHEKGRMLSQWIHLGGVKAFLDGSLGSSSALFYEHYKDDPRSYGLQLVDMDYLL NTTLELDKSGLQIAIHAIGDKANDMLLDMYEKVVDLNGMKDHRFRIEHAQHLAPGAAKRF GKHGIIASVQPDHILDDANSAGKKIGIERAERSSYSFRSLLDGGAHLAFGSDWPVSDINP LQAIRTAVSRKPVGWEVPWIPAERLSLDDSLKAHTISAAYACFLDHVLGSLSEGKYADFV ILPSTSWNEFGSDITDHVLATYVNGKQAYP

Transcript Sequence

Transcript ID	Os01t0952700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41964153:41970108:1 gene:Os01g0952700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metal-dependent hydrolase, composite domain containing protein. (Os01t0952700-01)
Sequence	TGTGTTAGGCTGCCTCACACGGCGAGGGATCGCGGACTCCCCGGACGAGGCGGCGGCGGC GGCGGAGCTCCGGCGAACCCACACGGCGGCCGCCCCGACTCCGTCTCCTCTGCTTCTCCC ACAGCTCCGGCGACAATCCAGAAACTCCACTCCCTTGAGAGCGAGCGCCGCCGCGCCGCC GCCGGTGATTGCTTCCGCCTGCAGCCTCGTCGAAATCGTAGGCTGTGGATTCAGAAGAGA GAGGAGAGAGAGAAGTTCGAACAGAGCAGGTCACGTGGAGCGCCATGTCCACCCGGAGCG CCTTCCTCGCCGCCGGCGTTGCCATCGCCGCCGCCATCTTCCTCCTCCGCCCTGCTTCCG ACCTGTCGAGGGATTTGGGGGAAGCCGTCGCTGACATGATACTGGCCAATGCCACCATCT ACACCGCCGACCCCGCAATGCCGTTCGCCGAAGCCATGGCCGTACGCGCCGGCCGCGTGC TCCGCGTGGGCGGATACTACTCTGTTAAGGAGTTGAAGGGTAGACACACAATGGAGTTGA ATCTTAGTGGAAATGTTGTTCTTCCGGGATTCATTGATTCCCATGTGCACTTCATTGATG GTGGGTTGCAGTTAGCGCGGGTGCCACTTCGAGGGGTTACAAGCAAAGATGATTTCATCA ACAGGGTCAAGGAAGCTGTCAAAGATAAGCATCCTGGGCAATGGATATTTGGAGGAGGTT GGAACAATGATTTTTGGGGAGGTGATTACCCCACTGCTGCTTGGTTGGATGATATATCTC CTGATAATCCTGTCTGGCTTTCACGCATGGATGGACATATGGGAATAGCCAATTCACTAG CTATGAGAATGGCTGGGATCAACAAAAACACAAACAATCCAGTTGGTGGAACTATTATGA GAACAACTGAAGGAGAGCCTACCGGTCTTCTAGTTGATGCTGCTATGAAGCTTGTGTTTG ATGTTATCTCAGAAGTCTCTATCCATGAAAGGAGAGATGCTCTTCTTAGGGCAAGTAGAC ACGCCCTAATGAGGGGGGTGACTACTGTTGTTGATGTTGGAAGTTATTTCCCTGGAAAGT CAGAAAAGCAAGTCTGGCAAGATTTTACAGATATATATGAATGGGCTCATTCTGTCGAAA CAATGATTATGAGAGTTTGCTTATTCTTCCCCATGCCCACATGGTCTCGTGTTTATGACC TTATCCATGAAAAAGGTCGGATGTTAAGTCAATGGATTCATCTAGGTGGTGTTAAAGCTT TCCTTGATGGTTCTTTGGGTTCTTCCAGTGCTTTATTCTATGAGCACTACAAGGATGATC CTAGAAGTTATGGTCTCCAATTGGTTGACATGGATTATCTGCTCAATACAACATTAGAAT TAGACAAATCAGGACTACAGATTGCCATACATGCAATTGGAGATAAAGCCAATGATATGC TACTCGATATGTATGAGAAGGTGGTTGATTTGAATGGAATGAAGGATCATAGATTCCGGA TTGAGCATGCTCAACACCTTGCTCCCGGTGCAGCCAAGCGCTTTGGCAAACATGGTATTA TTGCATCTGTGCAGCCTGATCATATATTAGATGATGCCAATTCTGCTGGGAAGAAAATTG GGATAGAACGAGCTGAGCGAAGCTCCTATTCTTTTCGGTCACTATTAGATGGTGGTGCAC ATCTGGCTTTTGGTTCTGATTGGCCTGTTTCAGATATTAATCCATTACAAGCTATTCGAA CTGCAGTATCCCGCAAACCTGTTGGATGGGAAGTCCCTTGGATCCCTGCGGAACGCTTAT CTCTAGATGATTCTCTGAAAGCACATACTATATCTGCCGCCTATGCCTGCTTCCTTGACC ATGTTTTGGGCAGCCTATCTGAAGGAAAGTACGCCGATTTTGTGATCCTGCCTAGCACAT CATGGAACGAGTTCGGCAGCGACATAACGGACCACGTCTTGGCAACATATGTGAACGGCA AGCAGGCCTATCCATGATCCCATTAGGTGACCGACTGACTGTGCTCTAGGTTGAGTACCT GAACAAGAGATTTTAGCTATGTACCTAAACGAGCACTTGTCCAGATACACAGCCAAAATA TGTTAAATTTGCTGACAGGGAGTACTGTAATTGTCATATGCAAAGTTAGCTATTTACCTG AACAAGCACTTGTCCAAATACACAGCTAAAATCTCTTAAATTTGTGGACAGTGAATACTG TAATTGTCATATGCATACAACATCTGAGATTTTAGTATGTACTTGAACAAACACTTGTCT AGAGATACACAGCCAAAATCTCTTAAATTTGTGGATAGGGAGTACTGTAATTGTCATAAG CAAAGTCGACAGCAT