Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0952600-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:41955366:41962577:1 gene:Os01g0952600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LacZ (Fragment). (Os01t0952600-01);Similar to glycoside hydrolase family 2 protein. (Os01t0952600-02)
Sequence	CTAAGTGGATACTGGAAGTTCCTTTTGGCTTCCTCGCCAGAATCTGTTCCAGAGAAATTC TATGATGCCTACTTCAATGATTCAGATTGGGAGGCTTTGCCAGTTCCCTCAAACTGGCAA ATGCATGGGTTTGACCGTCCAATCTACACAAATGTCACTTATCCTTTCACCATGAACCCG CCATTTGTGCCAAATGATAATCCTACTGGCTGTTATAGGACGGTTTTTCGCATCCCAAAA GAGTGGAAAGGTCGAAGAATCTTGTTGCACTTTGAAGCTGTTGATTCAGCGTTTTTTGCT TGGGTAAACGGCGTTCCTGTTGGATATAGCCAGGACAGCAGGCTTCCTGCTGAGTTTGAG ATCACAGATTTCTGCCATCCTTGTGACTCAGAAAAGGAAAATGTTCTTGCTGTTCAAGTG ATGAGGTGGAGTGACGGTTCCTATCTTGAAGACCAGGACCATTGGTGGCTATCTGGTATT CACAGGGATGTTCTACTAGTATCAAAGCCACAGATCTTTATTACAGATTATTTTTTCAAA GCAACCTTGGATGAAGGCTTCCGTGTAGCTGATATTGAGGTTGAGGTGGAAATTGACTCA CAAAAGCAGGATCGGGAGCATGTCTCAACTTTGTCTATTGAAGCAACATTGTATGACAAT TATGGACCTGCTGATGTTTTAACTTCTGATATGTCTGCTGCTAGTGTGGCCAATTTGAAG TTGAAGCCAGCTTCAAGACCAAAACACTGTTATGGTTTTCATGGTTATGTTCTTGGTGGA AAAGTAGAAAATCCAAAACTTTGGTCTAGTGAACATCCCAACTTATACACTCTTGTTGTT GTCCTTAAAGATTCCAACGGGAAGCTCATTGAGTGTGAATCATGCCAAGTAGGAATCCGT AATGTCGTCCTGGCACACAAGCAGATGCTTGTCAATGGATGTCCTGTTGTAATAAGAGGT GTCAACAGACATGAGCATCATCCACGTGTTGGAAAGACAAATTTAGAAGCTTGCATGATT AAGGATCTGGTTTTGATGAGACAAAACAACATTAATGCTGTTAGAAACAGCCATTATCCC CAACATCCAAGGTGGTATGAGCTGTGTGACATTTTTGGACTTTATGTAATTGATGAAGCC AACATCGAGACGCATGGCTTTGATGAATCTAGCCATTTCAAACATCCTACACTTGAACCC TTCTGGGCAAGTGCTATGCTTGATCGTGTTGTTGGTATGGTGGAGAGAGACAAGAATCAT GCATGCATTATAGTATGGTCCTTGGGAAATGAATCTTCGTATGGACCAAATCACTCAGCC ATGTCTGGCTGGATTCGTGGAAAGGACCCGACAAGGCCCATCCATTATGAAGGAGGTGGT TCTAGAACATCCTCCACTGATATTGTATGCCCAATGTACATGCGTGTCTGGGATATTCTT AAGATCGCACAAGACCCTTCTGAAAATAGGCCCCTCATTCTTTGCGAATATTCACATGCT ATGGGAAACAGTAATGGAAATATTGATGCATATTGGATGGCCATAGACAACACTGTTGGA CTCCAAGGTGGTTTTATATGGGACTGGGTCGATCAGGGTTTACTAAAGGAAGATGCTGAT GGATCTAAAAACTGGGCATATGGTGGCGACTTTGGAGACACTCCAAATGACTTGAATTTT TGTCTTAATGGCATTGTATGGCCTGATCGGACAATTCACCCAGCTGTGCATGAAGTTAAA TATTTATACCAGCCTATCAAAATAACAATGATGGATAACATGCTTAAGATTGAAAACGTA CATTTTTTTGAGACAACAGAAGCTTTGGACTTCAGTTGGCTACTTCAAGGAGATGGCTGT GCTTTGGGCTCTGGTTCACTTAATGTCCCATCCATAGCACCACAGAGTACTCATCTGATC AATATGAAGTCATCACCTTGGTTTACTATTTGGAGTACTTGTGTCGTAAAAGAAATATTT TTGTCCATTAACGTGAAATTGAGGTACCAAACACAATGGGCCAAAGATGGCCATATCTTG GCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCATGCGATAGCACTG CCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCATGTACTCATCAGCAAAAGTAAT GCCTGGCAAATCAAAGTAAACAGTATTTCAGGAACAATCGATAGTTGGAAGGTCAACAAC ATTGAGCTTATGAGCAAGGGAATACACCCATGCTTTTGGCGAACACCAACTGACAACGAC AAGGGAGGCTTCTACACCAAGCCCTATGTTTCAAGATGGAGAGAAGCTTCTCTCGACAAC ATCTCGTTCTACAGCAGCCAGTTTTCTCTGAAGGAATTGCCAGACCAAACCGTCGAGATC TCCACCATCTACTACGGTCTTCCTGGGAATCAACCAAAGCCTGATGAAACCTCTCTCTCA GACGAATCCGAGTCCGTCCTCTTCCGGGTGCAGATGCGCGGCCGGATCTACGACTCCGGC GACGTGATCCTGGACTACGAGGTGAGCCCCAAGAACGACCTGCCTCCTCTTCCTCGCGTC GGCGTCGTGTTCAACGCCGACAAGTCCCTGAGCCGTGCAAAATGGTACGGGAGGGGGCCA TTCGAGTGCTACCCGGACCGGAAGGCCGCCGCGCACGTCGGCGTGTACGAGAGCGGCGTC GACGAGCTGCACGTGCCGTACATTGTCCCCGGCGAGTGCGGCGGCCGGGCTGACGTCCGG TGGGTGGCGCTCCAGGACGCCGACGGGTTCGGCCTCTTCGCGTCGGCCTACGGCGAGTCG CCGCCGATGCAGGTGAGCGCCAGCTACTATGGCGCCGCGGAGCTCGACCGCGCGACGCAT AACCACAAGCTCGTCAAGGGAGACGACATCGAGGTGCATCTTGATCACAAGCACATGGGG CTGGGAGGGGACGACAGCTGGTCGCCGTGCGTGCACGAGCAGTACTTGCTGCCGCCGGCG AGATACGCCTTCTCGGTGAGGCTGTGCCCGTTGCTGCCGTCGTCGTCGTGCCATGACATC TACCACTCTCAGCTACCCTGTTGA

Peptide Sequence

PEP ID	Os01t0952600-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:41955366:41962577:1 gene:Os01g0952600 transcript:Os01t0952600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LacZ (Fragment). (Os01t0952600-01);Similar to glycoside hydrolase family 2 protein. (Os01t0952600-02)
Sequence	LSGYWKFLLASSPESVPEKFYDAYFNDSDWEALPVPSNWQMHGFDRPIYTNVTYPFTMNP PFVPNDNPTGCYRTVFRIPKEWKGRRILLHFEAVDSAFFAWVNGVPVGYSQDSRLPAEFE ITDFCHPCDSEKENVLAVQVMRWSDGSYLEDQDHWWLSGIHRDVLLVSKPQIFITDYFFK ATLDEGFRVADIEVEVEIDSQKQDREHVSTLSIEATLYDNYGPADVLTSDMSAASVANLK LKPASRPKHCYGFHGYVLGGKVENPKLWSSEHPNLYTLVVVLKDSNGKLIECESCQVGIR NVVLAHKQMLVNGCPVVIRGVNRHEHHPRVGKTNLEACMIKDLVLMRQNNINAVRNSHYP QHPRWYELCDIFGLYVIDEANIETHGFDESSHFKHPTLEPFWASAMLDRVVGMVERDKNH ACIIVWSLGNESSYGPNHSAMSGWIRGKDPTRPIHYEGGGSRTSSTDIVCPMYMRVWDIL KIAQDPSENRPLILCEYSHAMGNSNGNIDAYWMAIDNTVGLQGGFIWDWVDQGLLKEDAD GSKNWAYGGDFGDTPNDLNFCLNGIVWPDRTIHPAVHEVKYLYQPIKITMMDNMLKIENV HFFETTEALDFSWLLQGDGCALGSGSLNVPSIAPQSTHLINMKSSPWFTIWSTCVVKEIF LSINVKLRYQTQWAKDGHILASAQICLPPKKGFVPHAIALPRSSLVSERVGDHVLISKSN AWQIKVNSISGTIDSWKVNNIELMSKGIHPCFWRTPTDNDKGGFYTKPYVSRWREASLDN ISFYSSQFSLKELPDQTVEISTIYYGLPGNQPKPDETSLSDESESVLFRVQMRGRIYDSG DVILDYEVSPKNDLPPLPRVGVVFNADKSLSRAKWYGRGPFECYPDRKAAAHVGVYESGV DELHVPYIVPGECGGRADVRWVALQDADGFGLFASAYGESPPMQVSASYYGAAELDRATH NHKLVKGDDIEVHLDHKHMGLGGDDSWSPCVHEQYLLPPARYAFSVRLCPLLPSSSCHDI YHSQLPC

Transcript Sequence

Transcript ID	Os01t0952600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41955366:41962577:1 gene:Os01g0952600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LacZ (Fragment). (Os01t0952600-01);Similar to glycoside hydrolase family 2 protein. (Os01t0952600-02)
Sequence	CTAAGTGGATACTGGAAGTTCCTTTTGGCTTCCTCGCCAGAATCTGTTCCAGAGAAATTC TATGATGCCTACTTCAATGATTCAGATTGGGAGGCTTTGCCAGTTCCCTCAAACTGGCAA ATGCATGGGTTTGACCGTCCAATCTACACAAATGTCACTTATCCTTTCACCATGAACCCG CCATTTGTGCCAAATGATAATCCTACTGGCTGTTATAGGACGGTTTTTCGCATCCCAAAA GAGTGGAAAGGTCGAAGAATCTTGTTGCACTTTGAAGCTGTTGATTCAGCGTTTTTTGCT TGGGTAAACGGCGTTCCTGTTGGATATAGCCAGGACAGCAGGCTTCCTGCTGAGTTTGAG ATCACAGATTTCTGCCATCCTTGTGACTCAGAAAAGGAAAATGTTCTTGCTGTTCAAGTG ATGAGGTGGAGTGACGGTTCCTATCTTGAAGACCAGGACCATTGGTGGCTATCTGGTATT CACAGGGATGTTCTACTAGTATCAAAGCCACAGATCTTTATTACAGATTATTTTTTCAAA GCAACCTTGGATGAAGGCTTCCGTGTAGCTGATATTGAGGTTGAGGTGGAAATTGACTCA CAAAAGCAGGATCGGGAGCATGTCTCAACTTTGTCTATTGAAGCAACATTGTATGACAAT TATGGACCTGCTGATGTTTTAACTTCTGATATGTCTGCTGCTAGTGTGGCCAATTTGAAG TTGAAGCCAGCTTCAAGACCAAAACACTGTTATGGTTTTCATGGTTATGTTCTTGGTGGA AAAGTAGAAAATCCAAAACTTTGGTCTAGTGAACATCCCAACTTATACACTCTTGTTGTT GTCCTTAAAGATTCCAACGGGAAGCTCATTGAGTGTGAATCATGCCAAGTAGGAATCCGT AATGTCGTCCTGGCACACAAGCAGATGCTTGTCAATGGATGTCCTGTTGTAATAAGAGGT GTCAACAGACATGAGCATCATCCACGTGTTGGAAAGACAAATTTAGAAGCTTGCATGATT AAGGATCTGGTTTTGATGAGACAAAACAACATTAATGCTGTTAGAAACAGCCATTATCCC CAACATCCAAGGTGGTATGAGCTGTGTGACATTTTTGGACTTTATGTAATTGATGAAGCC AACATCGAGACGCATGGCTTTGATGAATCTAGCCATTTCAAACATCCTACACTTGAACCC TTCTGGGCAAGTGCTATGCTTGATCGTGTTGTTGGTATGGTGGAGAGAGACAAGAATCAT GCATGCATTATAGTATGGTCCTTGGGAAATGAATCTTCGTATGGACCAAATCACTCAGCC ATGTCTGGCTGGATTCGTGGAAAGGACCCGACAAGGCCCATCCATTATGAAGGAGGTGGT TCTAGAACATCCTCCACTGATATTGTATGCCCAATGTACATGCGTGTCTGGGATATTCTT AAGATCGCACAAGACCCTTCTGAAAATAGGCCCCTCATTCTTTGCGAATATTCACATGCT ATGGGAAACAGTAATGGAAATATTGATGCATATTGGATGGCCATAGACAACACTGTTGGA CTCCAAGGTGGTTTTATATGGGACTGGGTCGATCAGGGTTTACTAAAGGAAGATGCTGAT GGATCTAAAAACTGGGCATATGGTGGCGACTTTGGAGACACTCCAAATGACTTGAATTTT TGTCTTAATGGCATTGTATGGCCTGATCGGACAATTCACCCAGCTGTGCATGAAGTTAAA TATTTATACCAGCCTATCAAAATAACAATGATGGATAACATGCTTAAGATTGAAAACGTA CATTTTTTTGAGACAACAGAAGCTTTGGACTTCAGTTGGCTACTTCAAGGAGATGGCTGT GCTTTGGGCTCTGGTTCACTTAATGTCCCATCCATAGCACCACAGAGTACTCATCTGATC AATATGAAGTCATCACCTTGGTTTACTATTTGGAGTACTTGTGTCGTAAAAGAAATATTT TTGTCCATTAACGTGAAATTGAGGTACCAAACACAATGGGCCAAAGATGGCCATATCTTG GCTTCAGCACAAATTTGTTTACCTCCGAAAAAAGGCTTTGTCCCTCATGCGATAGCACTG CCCAGGAGCTCTTTGGTTTCGGAACGTGTTGGTGATCATGTACTCATCAGCAAAAGTAAT GCCTGGCAAATCAAAGTAAACAGTATTTCAGGAACAATCGATAGTTGGAAGGTCAACAAC ATTGAGCTTATGAGCAAGGGAATACACCCATGCTTTTGGCGAACACCAACTGACAACGAC AAGGGAGGCTTCTACACCAAGCCCTATGTTTCAAGATGGAGAGAAGCTTCTCTCGACAAC ATCTCGTTCTACAGCAGCCAGTTTTCTCTGAAGGAATTGCCAGACCAAACCGTCGAGATC TCCACCATCTACTACGGTCTTCCTGGGAATCAACCAAAGCCTGATGAAACCTCTCTCTCA GACGAATCCGAGTCCGTCCTCTTCCGGGTGCAGATGCGCGGCCGGATCTACGACTCCGGC GACGTGATCCTGGACTACGAGGTGAGCCCCAAGAACGACCTGCCTCCTCTTCCTCGCGTC GGCGTCGTGTTCAACGCCGACAAGTCCCTGAGCCGTGCAAAATGGTACGGGAGGGGGCCA TTCGAGTGCTACCCGGACCGGAAGGCCGCCGCGCACGTCGGCGTGTACGAGAGCGGCGTC GACGAGCTGCACGTGCCGTACATTGTCCCCGGCGAGTGCGGCGGCCGGGCTGACGTCCGG TGGGTGGCGCTCCAGGACGCCGACGGGTTCGGCCTCTTCGCGTCGGCCTACGGCGAGTCG CCGCCGATGCAGGTGAGCGCCAGCTACTATGGCGCCGCGGAGCTCGACCGCGCGACGCAT AACCACAAGCTCGTCAAGGGAGACGACATCGAGGTGCATCTTGATCACAAGCACATGGGG CTGGGAGGGGACGACAGCTGGTCGCCGTGCGTGCACGAGCAGTACTTGCTGCCGCCGGCG AGATACGCCTTCTCGGTGAGGCTGTGCCCGTTGCTGCCGTCGTCGTCGTGCCATGACATC TACCACTCTCAGCTACCCTGTTGATCCGTCTGAGATGGGCAAGTGAGGCAATAAAGCAGA GACGTATATATGCTCCTGTAAACTACCGGCTGCAATGACCAGGTTGTTTGTCGACTGTGA AATAAGCGAGCGAGCTTGATGCTATTCCTCAATCTTGACTACAGTGTCAATTTCTCCTAT AAATGGCAATGGGGACCCATGACCCTG