Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0951800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:41904236:41907449:-1 gene:Os01g0951800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat 11 Fission 1 protein domain containing protein. (Os01t0951800-01)
Sequence

ATGGAGGCCAAGATCGGGAGGCTCGTCGGCGCCATAGGCGCCTTCTTCTCCGGCGGCGAC
AACGTCCCGTGGTGCGGCCGCGACATCATCGCTGGTGTCGAGAGAGAGGTCGCGGAGGCC
GCAACCGAAGAACACAAGAACGTGAGCATCATGAGGCTATCCTGGGCCCTCGTCCACTCG
AGGAACACGGACGATGTCAACCGTGGGATCGCCATGCTCCAAGCATCTTTGGGTGGCTCC
AAGAGTCCACTGGAGGCAAGGGAGAAGCTCTACTTGCTGGCTGTTGGGCATTACAGGAAT
GGTGACTATCCCAGGAGCCGGCAGCTTCTTGAACACTGTTTGGAGATTCAACCTGGCTGG
GGGCAGGCCCTGTCTTTGAAGAAGACAGTTGAAGATAAAATTGCTAAAGATGGTGTGATT
GGCATAGGTATAGCCACAACAGCTGTTGGACTGCTGGTTGGGATAGCTGCTGCTGTTGCT
CGGAAGAACTGA

Peptide Sequence

PEP ID

Os01t0951800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:41904236:41907449:-1 gene:Os01g0951800 transcript:Os01t0951800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat 11 Fission 1 protein domain containing protein. (Os01t0951800-01)
Sequence

MEAKIGRLVGAIGAFFSGGDNVPWCGRDIIAGVEREVAEAATEEHKNVSIMRLSWALVHS
RNTDDVNRGIAMLQASLGGSKSPLEAREKLYLLAVGHYRNGDYPRSRQLLEHCLEIQPGW
GQALSLKKTVEDKIAKDGVIGIGIATTAVGLLVGIAAAVARKN

Transcript Sequence

Transcript ID

Os01t0951800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:41904236:41907449:-1 gene:Os01g0951800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat 11 Fission 1 protein domain containing protein. (Os01t0951800-01)
Sequence

AGGCTGCGAGCGAAGCCGAGCCGTTTTCTTCCCCATCGATCAAGGCGATCGGCGGCCATG
GAGGCCAAGATCGGGAGGCTCGTCGGCGCCATAGGCGCCTTCTTCTCCGGCGGCGACAAC
GTCCCGTGGTGCGGCCGCGACATCATCGCTGGTGTCGAGAGAGAGGTCGCGGAGGCCGCA
ACCGAAGAACACAAGAACGTGAGCATCATGAGGCTATCCTGGGCCCTCGTCCACTCGAGG
AACACGGACGATGTCAACCGTGGGATCGCCATGCTCCAAGCATCTTTGGGTGGCTCCAAG
AGTCCACTGGAGGCAAGGGAGAAGCTCTACTTGCTGGCTGTTGGGCATTACAGGAATGGT
GACTATCCCAGGAGCCGGCAGCTTCTTGAACACTGTTTGGAGATTCAACCTGGCTGGGGG
CAGGCCCTGTCTTTGAAGAAGACAGTTGAAGATAAAATTGCTAAAGATGGTGTGATTGGC
ATAGGTATAGCCACAACAGCTGTTGGACTGCTGGTTGGGATAGCTGCTGCTGTTGCTCGG
AAGAACTGAGGCATAGCGGTTCCAGATTGATTTATGGGAATTGAGATTTCTGTCGTCAGA
TACTCTTTTATGCTGGTGACATTTTTGTTCAAGTTCTAGTCTGCAAGAATTCCCTCTTTA
TTGACACAATTTAAGGTAGTATGATACAGTATGCTCCGAATGCTTTACAATCTCACCTCC
ATCTCATAATTCTCTATCGGACAATATTTTCCACGTGATCTTTCAGAATTGAGATCAATC
AATCC