Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0951200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:41887067:41890848:1 gene:Os01g0951200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UMP synthase 1 description:Similar to Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase). (Os01t0951200-01)
Sequence	ATGGACGCCGCCGCGCAGGAATCCCTCATCCTGGAGCTCCACGCCATCGAGGCCATCAAG TTCGGCACCTTCGTGCTCAAGTCCGGCATCACCTCCCCGATCTACCTCGACCTCCGCGCG CTCGTCTCCCACCCGGGCCTCCTCTCCTCCATCGCCACCCTCCTCCACACCCTCCCGGCG ACCCGCCCCTACGACCTCCTCTGCGGCGTCCCCTACACCGCGCTCCCCATCGCCTCCGTC CTCTCCGTCCACCGCTCCGTCCCCATGGTCATGCGCCGCAAGGAGGCCAAGGCCCACGGC ACCGCCAAGTCCATCGAGGGCGCCTTCCGCGCCGGGGAGGCCGTGCTCATCATCGAGGAC CTCGTCACCAGCGGCGCCTCCGTTCTCGAGACCGCCGCGCCGCTCCGCGACCAGGGGCTC GTCGTCGCCGACGCCGTCGTCGTCGTCGACCGCGAGCAGGGCGGGAGGGAGAACCTTGCC GCCAATGGGATCACGCTGCACTCGCTCATGACCCTCACGGAGGTGCTCGCCGTGCTGCTC AAGCACGGGAAGGTGACCGAGGAGAAGGCGAGGGAGGTAAGGCAGTTTCTTGACGCCAAT AGGAAGGTGACCGTTCCCGGAGCGGCGGGCGCCGTTAAGCCCAAAGCGGTCAGGAAGGGG TTTGCTGAGAGGGCTGGATTGGCCAAGAACCCGATGGGGAAGAGGCTTTTCGAGGTGATG GAGGCAAAGCAGAGCAATTTATGTGTTGCTGCCGATGTGGGAACTGCAAAGGAGCTCCTT GAGCTTGCAGAGAAGGTTGGTCCAGAGATTTGCATGCTGAAAACTCATGTGGATATCTTG TCTGACTTTACTCCAGATTTTGGAGCTAAGCTTTGCTCGATTGCCGAGAAGCACAACTTT TTGATATTTGAAGACCGCAAGTTTGCTGACATTGGAAACACAGTGACTATGCAATATGAA GGAGGAATATTTCGCATATTAGACTGGGCTGATATCGTCAATGCCCATATAATTCCTGGA CCTGGAATTGTGGATGGTCTGAAGCTTAAGGGTTTGCCAAAAGGAAGAGGGCTGCTTTTG CTTGCTGAAATGAGCTCGGCTGGCAACCTTGCTCATGGAGAGTACACTGCTGCAGCTGTA AAGATTGCTGAGCAACATTCTGATTTTGTAATTGGATTTATATCCGTTAATCCAGCATCT TGGTCAGTTGCGCCATCAAGTCCAGCATTTATCCATGCCACTCCTGGAGTGCAGATGGTT TCTGGAGGAGATGCTCTTGGTCAACAGTACAATACCCCTCATTCTGTTATAAACGACAGA GGCAGTGACATAATTATAGTCGGACGAGGGATTATAAAGGCGAGTAATCCAGCCGAGACC GCGAGGGAGTACCGCATCCAAGGGTGGGGAGCATACCAATCCAGCTTGCCATGA

Peptide Sequence

PEP ID	Os01t0951200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:41887067:41890848:1 gene:Os01g0951200 transcript:Os01t0951200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UMP synthase 1 description:Similar to Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase). (Os01t0951200-01)
Sequence	MDAAAQESLILELHAIEAIKFGTFVLKSGITSPIYLDLRALVSHPGLLSSIATLLHTLPA TRPYDLLCGVPYTALPIASVLSVHRSVPMVMRRKEAKAHGTAKSIEGAFRAGEAVLIIED LVTSGASVLETAAPLRDQGLVVADAVVVVDREQGGRENLAANGITLHSLMTLTEVLAVLL KHGKVTEEKAREVRQFLDANRKVTVPGAAGAVKPKAVRKGFAERAGLAKNPMGKRLFEVM EAKQSNLCVAADVGTAKELLELAEKVGPEICMLKTHVDILSDFTPDFGAKLCSIAEKHNF LIFEDRKFADIGNTVTMQYEGGIFRILDWADIVNAHIIPGPGIVDGLKLKGLPKGRGLLL LAEMSSAGNLAHGEYTAAAVKIAEQHSDFVIGFISVNPASWSVAPSSPAFIHATPGVQMV SGGDALGQQYNTPHSVINDRGSDIIIVGRGIIKASNPAETAREYRIQGWGAYQSSLP

Transcript Sequence

Transcript ID	Os01t0951200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41887067:41890848:1 gene:Os01g0951200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UMP synthase 1 description:Similar to Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase). (Os01t0951200-01)
Sequence	ACAGTAGTAATAAAACCTCCTCCTGTCGGCTTCCTCCTTCCTCCTCCCGCCGCCGCACAG CGCAAACCCCGCCCAAAACCCTAGCTAAGCCTAGCCGCCATGGACGCCGCCGCGCAGGAA TCCCTCATCCTGGAGCTCCACGCCATCGAGGCCATCAAGTTCGGCACCTTCGTGCTCAAG TCCGGCATCACCTCCCCGATCTACCTCGACCTCCGCGCGCTCGTCTCCCACCCGGGCCTC CTCTCCTCCATCGCCACCCTCCTCCACACCCTCCCGGCGACCCGCCCCTACGACCTCCTC TGCGGCGTCCCCTACACCGCGCTCCCCATCGCCTCCGTCCTCTCCGTCCACCGCTCCGTC CCCATGGTCATGCGCCGCAAGGAGGCCAAGGCCCACGGCACCGCCAAGTCCATCGAGGGC GCCTTCCGCGCCGGGGAGGCCGTGCTCATCATCGAGGACCTCGTCACCAGCGGCGCCTCC GTTCTCGAGACCGCCGCGCCGCTCCGCGACCAGGGGCTCGTCGTCGCCGACGCCGTCGTC GTCGTCGACCGCGAGCAGGGCGGGAGGGAGAACCTTGCCGCCAATGGGATCACGCTGCAC TCGCTCATGACCCTCACGGAGGTGCTCGCCGTGCTGCTCAAGCACGGGAAGGTGACCGAG GAGAAGGCGAGGGAGGTAAGGCAGTTTCTTGACGCCAATAGGAAGGTGACCGTTCCCGGA GCGGCGGGCGCCGTTAAGCCCAAAGCGGTCAGGAAGGGGTTTGCTGAGAGGGCTGGATTG GCCAAGAACCCGATGGGGAAGAGGCTTTTCGAGGTGATGGAGGCAAAGCAGAGCAATTTA TGTGTTGCTGCCGATGTGGGAACTGCAAAGGAGCTCCTTGAGCTTGCAGAGAAGGTTGGT CCAGAGATTTGCATGCTGAAAACTCATGTGGATATCTTGTCTGACTTTACTCCAGATTTT GGAGCTAAGCTTTGCTCGATTGCCGAGAAGCACAACTTTTTGATATTTGAAGACCGCAAG TTTGCTGACATTGGAAACACAGTGACTATGCAATATGAAGGAGGAATATTTCGCATATTA GACTGGGCTGATATCGTCAATGCCCATATAATTCCTGGACCTGGAATTGTGGATGGTCTG AAGCTTAAGGGTTTGCCAAAAGGAAGAGGGCTGCTTTTGCTTGCTGAAATGAGCTCGGCT GGCAACCTTGCTCATGGAGAGTACACTGCTGCAGCTGTAAAGATTGCTGAGCAACATTCT GATTTTGTAATTGGATTTATATCCGTTAATCCAGCATCTTGGTCAGTTGCGCCATCAAGT CCAGCATTTATCCATGCCACTCCTGGAGTGCAGATGGTTTCTGGAGGAGATGCTCTTGGT CAACAGTACAATACCCCTCATTCTGTTATAAACGACAGAGGCAGTGACATAATTATAGTC GGACGAGGGATTATAAAGGCGAGTAATCCAGCCGAGACCGCGAGGGAGTACCGCATCCAA GGGTGGGGAGCATACCAATCCAGCTTGCCATGAGAAATTGAGAATGTGTTTAGGCCATGT TTGTTTCAGCTTATGATTATTATAATCTAGATTATTAAGCCAGATTGCTATAAGCTGGAT TATAATAAGCTGACATAGAATAAGCTGTGAGTTGTTTGTTTGTCTGGATTATTGGAGGCA TGGATTATTGGGTTTGAAAGGCTAAAGTCTATAATACCCTCAGCTATCTGTTCGGTTGAT GGCATAGTGGTTAATTTTTCTCAAGCATGTAGGGGTAGTGGGTCTTTAGCCACTCAATAA TCTGAAAAAAGCTCCTTTAGAGCAGCTTATTAGATTATAATAATCTGGCTTATAGATTAT AATAATCTGCTACAATAATCTACTTGTTTGTTTCAGTTTACTCCTAATAAGGTAGATTAT AATAATCCTAAACTGAATCAAACAGGCCCTTAGTCCACACCCTATGCCAAATAATGGGCA TTCACTCATTCAGGCAGCTACTGTAATAAGAGCATGCTCTGCGTTCCATCAGTATTGGCT CGCGCTGTTTGCAACAATAATTTAGAGTTCAAGATGATGAAG