Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0950900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:41869950:41873872:1 gene:Os01g0950900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 2.5 description:Protein of unknown function DUF221 domain containing protein. (Os01t0950900-01)
Sequence	ATGGACGCGGAGGGGTTGCTGGCGTCGGCGGCGATCAACCTGGGCCTGGCGCTGGTGGCG CTCTCGCTCTTCTCCTTGCTCAAGAAGCAGCCCGGCAACGCGCCGGTGTACCTTGCGCGG CGGATGGCCGCCGGTGGCGGTGGGGGCGGGCTGCCGCTCGGCCACGGGCGGTTGACCCCG TCGTTCCGGTGGATCCGCGCCGCGCTCCGGCTCTCCGAGGACGACGTGCTGCGGCGCCAC GGCCTCGACGCGCTCGTCGTCGTCCGCCTCTTCAAATTCGGGATCAAGTGCTTCGCTGTT TGCTCAATCGTTGGATTGTTCATCCTTGCACCAACAAATTATTCCTGTGAAGGTCTACAA GACACCAAAAGGTCAAATTCAATGGAACTTTTCACGGTATCCAATGTGGCAAGGGGTTCT AACAGGCTTTGGGTGCATTTTGCATGCCTCTGCTTCATATCATTCTATGTGGTGTATTTG CTTCATAAGGAGCACAAAGAAATGTCCAGCAGAAGAATTGCACATTTGAAGTATCACAGG AAACGGCCTGACCAATATACCATTTTAGTTCGAGGAATTCCACTATGCCCAGATCATGGA ACTTATGGGTGTTATGCTGACCACTTCTTCTCAAAGCACTACCGAACATACCAATCGTAT CACATAGTACACGACATTGGAAACATCAAGGCACTTCAGAAGTTGGCATCCTCCCTTGAG GACAAGATAAAGAGGAAAAGAGAAACCAGAAGATGTAACTTTTGGAAGTGGATCTGGTTT AAGTTGACATTAGAAGCGATAGATACTCGCAAACTGGAAGAAAAACTGAAGAACGTCCAT CACTCTATCCGCCTCCTACAGTGTGAAAATATGCTTAAACGGAAGGAATTACCGGTTGCT TTTGTCTCATTCAAATCACAGCTGGATGCTGCCCAAGCTGCCGAAATGCAACAGCATGTC AATCCTCTGTCCTTGGTGACAACATATGCTCCTGAACCACCTGATGCACTATGGACAAAT CTGGCTATTCCTTTCTGCCGTATTGCTATATACAAACTTGGTGTCTTCATTGCTGCGTTT CTGCTAATAGTGTTCTTCACCATCCCTGTCACAGCTGTGCAAGGGATAGTACAATTTGAG AAAATTAAAATATGGTTTCCACCGGCTAGAGCTGTGGAACTTATACCAGGTTTGAATTCT GTCGTAACTGGGTATCTTCCAAGCATGATCTTGAATGGCTTTATCTACTTGATTCCCTTC GCGATGCTTGGCATGGCATCATTTGAGGGATGCATTGCAAAAAGTCAGAAGGAAATCAAG GCCTGCAACATGGTATTTTACTTCTTGTTAGGGAATGTTTTCTTTTTGAGCATTCTTTCT GGTTCTCTACTCCACCAGATAGGAGAATCCTTTACACATCCAAAAGACATACCTAGCCGT CTGGCCCGTGCTGTTTCTGCACAGTCAGATTTCTTCATCACATACATTTTGACCGACGGC ATGTCAGGGTTTTCCTTGGAGGTTCTTCAGTTTGGTTTGCTTACATGGCATTTCTTCAAG GCACATTCAATTGGACATAGTGAGCAGCCATATCTTTATGGCTTCCCTTACTACAGAGTT GTGCCCATCGTTTCCCTTGCAGTATTGATTGGGTTGGTCTATGCTGTTGTTGCGCCTCTT CTACTTCCAATTCTTGTTATCTACTTTTTGCTTGGTTACGCAGTGTACATCAACCAGATG GAAGATGTATATGAGATTACATATGATACTTGTGGACAATATTGGCCCAATATTCATCGC TACATCTTCCTTTCGGTCACACTCATGCAAATTACAATGCTGAAGTCGAAACCGGGGGCT TCATTCGCCACGGTTCCCTTGCTTGTGTCAACCATTTTGTTCAATGAGTACTGCAAGGTT CGGTTTCTTCCAACTTTCCTTCATCGACCGGTTCAGGTTGCCAAGGAGAATGACGACCTT AATGAAGCTGAGGGGATGAGAGGTGACCTGGACCATGCCATTAGCGCCTATAAGCCACCA TGGATGCGCCCGACGAACTTCTCTCCAGATTGTAGTTCGGTACAACCTTTGATCCGTTCT GTATAG

Peptide Sequence

PEP ID	Os01t0950900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:41869950:41873872:1 gene:Os01g0950900 transcript:Os01t0950900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 2.5 description:Protein of unknown function DUF221 domain containing protein. (Os01t0950900-01)
Sequence	MDAEGLLASAAINLGLALVALSLFSLLKKQPGNAPVYLARRMAAGGGGGGLPLGHGRLTP SFRWIRAALRLSEDDVLRRHGLDALVVVRLFKFGIKCFAVCSIVGLFILAPTNYSCEGLQ DTKRSNSMELFTVSNVARGSNRLWVHFACLCFISFYVVYLLHKEHKEMSSRRIAHLKYHR KRPDQYTILVRGIPLCPDHGTYGCYADHFFSKHYRTYQSYHIVHDIGNIKALQKLASSLE DKIKRKRETRRCNFWKWIWFKLTLEAIDTRKLEEKLKNVHHSIRLLQCENMLKRKELPVA FVSFKSQLDAAQAAEMQQHVNPLSLVTTYAPEPPDALWTNLAIPFCRIAIYKLGVFIAAF LLIVFFTIPVTAVQGIVQFEKIKIWFPPARAVELIPGLNSVVTGYLPSMILNGFIYLIPF AMLGMASFEGCIAKSQKEIKACNMVFYFLLGNVFFLSILSGSLLHQIGESFTHPKDIPSR LARAVSAQSDFFITYILTDGMSGFSLEVLQFGLLTWHFFKAHSIGHSEQPYLYGFPYYRV VPIVSLAVLIGLVYAVVAPLLLPILVIYFLLGYAVYINQMEDVYEITYDTCGQYWPNIHR YIFLSVTLMQITMLKSKPGASFATVPLLVSTILFNEYCKVRFLPTFLHRPVQVAKENDDL NEAEGMRGDLDHAISAYKPPWMRPTNFSPDCSSVQPLIRSV

Transcript Sequence

Transcript ID	Os01t0950900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41869950:41873872:1 gene:Os01g0950900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 2.5 description:Protein of unknown function DUF221 domain containing protein. (Os01t0950900-01)
Sequence	GGGGTTGTCGAGGCGGCGGAGGTTGCGGCGGGGATGGACGCGGAGGGGTTGCTGGCGTCG GCGGCGATCAACCTGGGCCTGGCGCTGGTGGCGCTCTCGCTCTTCTCCTTGCTCAAGAAG CAGCCCGGCAACGCGCCGGTGTACCTTGCGCGGCGGATGGCCGCCGGTGGCGGTGGGGGC GGGCTGCCGCTCGGCCACGGGCGGTTGACCCCGTCGTTCCGGTGGATCCGCGCCGCGCTC CGGCTCTCCGAGGACGACGTGCTGCGGCGCCACGGCCTCGACGCGCTCGTCGTCGTCCGC CTCTTCAAATTCGGGATCAAGTGCTTCGCTGTTTGCTCAATCGTTGGATTGTTCATCCTT GCACCAACAAATTATTCCTGTGAAGGTCTACAAGACACCAAAAGGTCAAATTCAATGGAA CTTTTCACGGTATCCAATGTGGCAAGGGGTTCTAACAGGCTTTGGGTGCATTTTGCATGC CTCTGCTTCATATCATTCTATGTGGTGTATTTGCTTCATAAGGAGCACAAAGAAATGTCC AGCAGAAGAATTGCACATTTGAAGTATCACAGGAAACGGCCTGACCAATATACCATTTTA GTTCGAGGAATTCCACTATGCCCAGATCATGGAACTTATGGGTGTTATGCTGACCACTTC TTCTCAAAGCACTACCGAACATACCAATCGTATCACATAGTACACGACATTGGAAACATC AAGGCACTTCAGAAGTTGGCATCCTCCCTTGAGGACAAGATAAAGAGGAAAAGAGAAACC AGAAGATGTAACTTTTGGAAGTGGATCTGGTTTAAGTTGACATTAGAAGCGATAGATACT CGCAAACTGGAAGAAAAACTGAAGAACGTCCATCACTCTATCCGCCTCCTACAGTGTGAA AATATGCTTAAACGGAAGGAATTACCGGTTGCTTTTGTCTCATTCAAATCACAGCTGGAT GCTGCCCAAGCTGCCGAAATGCAACAGCATGTCAATCCTCTGTCCTTGGTGACAACATAT GCTCCTGAACCACCTGATGCACTATGGACAAATCTGGCTATTCCTTTCTGCCGTATTGCT ATATACAAACTTGGTGTCTTCATTGCTGCGTTTCTGCTAATAGTGTTCTTCACCATCCCT GTCACAGCTGTGCAAGGGATAGTACAATTTGAGAAAATTAAAATATGGTTTCCACCGGCT AGAGCTGTGGAACTTATACCAGGTTTGAATTCTGTCGTAACTGGGTATCTTCCAAGCATG ATCTTGAATGGCTTTATCTACTTGATTCCCTTCGCGATGCTTGGCATGGCATCATTTGAG GGATGCATTGCAAAAAGTCAGAAGGAAATCAAGGCCTGCAACATGGTATTTTACTTCTTG TTAGGGAATGTTTTCTTTTTGAGCATTCTTTCTGGTTCTCTACTCCACCAGATAGGAGAA TCCTTTACACATCCAAAAGACATACCTAGCCGTCTGGCCCGTGCTGTTTCTGCACAGTCA GATTTCTTCATCACATACATTTTGACCGACGGCATGTCAGGGTTTTCCTTGGAGGTTCTT CAGTTTGGTTTGCTTACATGGCATTTCTTCAAGGCACATTCAATTGGACATAGTGAGCAG CCATATCTTTATGGCTTCCCTTACTACAGAGTTGTGCCCATCGTTTCCCTTGCAGTATTG ATTGGGTTGGTCTATGCTGTTGTTGCGCCTCTTCTACTTCCAATTCTTGTTATCTACTTT TTGCTTGGTTACGCAGTGTACATCAACCAGATGGAAGATGTATATGAGATTACATATGAT ACTTGTGGACAATATTGGCCCAATATTCATCGCTACATCTTCCTTTCGGTCACACTCATG CAAATTACAATGCTGAAGTCGAAACCGGGGGCTTCATTCGCCACGGTTCCCTTGCTTGTG TCAACCATTTTGTTCAATGAGTACTGCAAGGTTCGGTTTCTTCCAACTTTCCTTCATCGA CCGGTTCAGGTTGCCAAGGAGAATGACGACCTTAATGAAGCTGAGGGGATGAGAGGTGAC CTGGACCATGCCATTAGCGCCTATAAGCCACCATGGATGCGCCCGACGAACTTCTCTCCA GATTGTAGTTCGGTACAACCTTTGATCCGTTCTGTATAGTAGTGTTGGTGACACCGCTAG CTTGGTATTGGTTTTAGTCCTGTTACATAATAAGAACCAGGCAAATTTTCGTGTGAAGTT TGGCTGTTGGCAGATATAAGCTCGCATATAACAATGGCATATGCTTTTTATGTGCTCAAG GAGTCGTTTTACATGTAATTACCACGCTTTGGCTCAGTTTACTCGGTGAAAATTACAAAT TCAAACAATTTTCCTCT