Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0948900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:41741371:41742625:-1 gene:Os01g0948900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NPR1-like gene 5 description:Ankyrin repeat containing protein. (Os01t0948900-01);Ankyrin repeat containing protein. (Os01t0948900-02)
Sequence	ATGTGTGTTGATGGATGTGTGCAGAAGCAGCTGGCAGGCATGGTGGAGAAGGCGTCGATC GAGGACGTGATGAAGGTGCTTATGGCGTCGAGGAAGCAGGACCTGCACCAGCTGTGGACA ACGTGCTCCCACCTCGTCGCCAAGTCGGGGCTCCCGCCGGAGGTGCTCGCCAAGCACCTC CCCATCGACGTCGTCGCCAAGATCGACGAGCTCCGCCTCAAGTCCATGTCGCGCCGCTCG CCGTTCCTCTCGCACCACCACCACCACCCGCACGCGGCCGCCGCCGGCATCGAGGCGTCG TCGGCGGCCGAGCTCGACGACCACCACAAGATCCGCCGCATGCGCCGCGCGCTCGACTCC TCCGACGTCGAGCTCGTCAAGCTCATGGTGATGGGGGAGGGGCTCAACCTCGACGACGCC CTCGCGCTGCACTACGCCGTCGAGAACTGCAGCCGGGAGGTGGTCAAGGCGCTGCTGGAG CTCGGCGCCGCCGACGTCAACCACCCGGCGGGCCCCGCCGGGAAGACGCCGCTGCACGTC GCGGCGGAGATGGTGTGCCCGGACATGGTGGCCGTGCTGCTCGACCACCACGCCGACCCC AACGTCCGCACCGTCGACGGCGTCACGCCGCTCGACATCCTCCGCACGCTCACCTCCGAC TTCCTCTTCAAGGGCGCCGTGCCCGGCCTGGCGCACATCGAGCCCAACAAGCTCCGCCTC TGCCTGGAGCTCGTGCAGTCGGCGGCCATGGTGATGTCCCGGGAGGACGCCCAGACCGCC GCGGTCAATGCGGCGCCCATCTACGGCGAGTCCCCCGGCGGCGGCGGCGGCGGTGGCGTG TACAATGCCAGTGGCACCAGCTCGAGCATGGTGAACCTGAGCTTGGACAACAGGATGGTG TACCTGAACCTGGGGATGGACGCGCAGTTCGGGAAGATGAACGACGGTGGCGACGGCGAC GACGGCGGGAGCAGAGGGCCATCGTCGTTGTTCTCCCCACATGGCTTCCCCTGA

Peptide Sequence

PEP ID	Os01t0948900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:41741371:41742625:-1 gene:Os01g0948900 transcript:Os01t0948900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NPR1-like gene 5 description:Ankyrin repeat containing protein. (Os01t0948900-01);Ankyrin repeat containing protein. (Os01t0948900-02)
Sequence	MCVDGCVQKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHL PIDVVAKIDELRLKSMSRRSPFLSHHHHHPHAAAAGIEASSAAELDDHHKIRRMRRALDS SDVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHV AAEMVCPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRL CLELVQSAAMVMSREDAQTAAVNAAPIYGESPGGGGGGGVYNASGTSSSMVNLSLDNRMV YLNLGMDAQFGKMNDGGDGDDGGSRGPSSLFSPHGFP

Transcript Sequence

Transcript ID	Os01t0948900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41741371:41742625:-1 gene:Os01g0948900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NPR1-like gene 5 description:Ankyrin repeat containing protein. (Os01t0948900-01);Ankyrin repeat containing protein. (Os01t0948900-02)
Sequence	GGCATGCACAATCTTTTCTTCTTCCTTTCTTTCTCCTCTTCCTTTATATTCCCCCACCTC CATGCTCGCGAGCTTTAGTGAGCACAGTGAATTAAAGCGAAGCGATGTGAAAATATAATT GTGTACATGTGTGTTGATGGATGTGTGCAGAAGCAGCTGGCAGGCATGGTGGAGAAGGCG TCGATCGAGGACGTGATGAAGGTGCTTATGGCGTCGAGGAAGCAGGACCTGCACCAGCTG TGGACAACGTGCTCCCACCTCGTCGCCAAGTCGGGGCTCCCGCCGGAGGTGCTCGCCAAG CACCTCCCCATCGACGTCGTCGCCAAGATCGACGAGCTCCGCCTCAAGTCCATGTCGCGC CGCTCGCCGTTCCTCTCGCACCACCACCACCACCCGCACGCGGCCGCCGCCGGCATCGAG GCGTCGTCGGCGGCCGAGCTCGACGACCACCACAAGATCCGCCGCATGCGCCGCGCGCTC GACTCCTCCGACGTCGAGCTCGTCAAGCTCATGGTGATGGGGGAGGGGCTCAACCTCGAC GACGCCCTCGCGCTGCACTACGCCGTCGAGAACTGCAGCCGGGAGGTGGTCAAGGCGCTG CTGGAGCTCGGCGCCGCCGACGTCAACCACCCGGCGGGCCCCGCCGGGAAGACGCCGCTG CACGTCGCGGCGGAGATGGTGTGCCCGGACATGGTGGCCGTGCTGCTCGACCACCACGCC GACCCCAACGTCCGCACCGTCGACGGCGTCACGCCGCTCGACATCCTCCGCACGCTCACC TCCGACTTCCTCTTCAAGGGCGCCGTGCCCGGCCTGGCGCACATCGAGCCCAACAAGCTC CGCCTCTGCCTGGAGCTCGTGCAGTCGGCGGCCATGGTGATGTCCCGGGAGGACGCCCAG ACCGCCGCGGTCAATGCGGCGCCCATCTACGGCGAGTCCCCCGGCGGCGGCGGCGGCGGT GGCGTGTACAATGCCAGTGGCACCAGCTCGAGCATGGTGAACCTGAGCTTGGACAACAGG ATGGTGTACCTGAACCTGGGGATGGACGCGCAGTTCGGGAAGATGAACGACGGTGGCGAC GGCGACGACGGCGGGAGCAGAGGGCCATCGTCGTTGTTCTCCCCACATGGCTTCCCCTGA CGACGAAAGGGGGTGTGGCCGCTTCTGCTCTACTATCTCCTTGTAAGCTTAGAACTAATT AATTACATGTTATTTATATCCACATTACAGGAGATGAGAATGATCCTTTTGGGCT