Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0948400-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:41718639:41721571:-1 gene:Os01g0948400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRROLINE-5-CARBOXYLATE REDUCTASE description:Similar to Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase). (Os01t0948400-01);Similar to pyrroline 5-carboxylate reductase. (Os01t0948400-02)
Sequence	ATGGCGGCGCCGCCTCAGCCCGTGCCGGCGCCCGCGGCCGCGTCGCCGGAGGTGTTCCGG CTCGGGTTCATCGGCCCGGGTAACCTCGCGGAGAGCATCGCCCGCGGCGTGGCGGCGTCG GGCGTCCTCCCGGCCACCGCGATCCGCACCGCGCCACACCGCCGCCCCGAGCGCGCCGAG GCCTTCTCATCCATCGGAGCTCACATCTTGGAGACCAACGCGCAGGTAGTTGATGACAGT GACGTGATCGTCATCTCTGTGAAGCCGCAGATCGTAAGGCAGGTACTGGTTGAGCTAAAA CCCTTGCTGTCAGAAGAAAAGCTTCTGGTGTCCATTGCTGCTGGCATCAAGATGGAAGAT CTGCAGGGTTGGTCTGGTCATCGAAGATTTATTAGAGTAATGCCAAACACCCCTTCAGCT GTTGGACAAGCAGCATCAGTGATGTGTTTGGGGGAGATGGCTACTGAGAATGATGAAAAC CGTGTAAGAAGTTTATTCAGTGCCATTGGAAAAGTTTGGACAGCTGAAGAAAAATATTTT GATGCTGTAACTGGGCTAAGTGGTAGTGGCCCGGCTTATATTTTCTTAGCAATAGAGGCC ATGGCTGATGGTGGAGTTGCTGCTGGTCTTCCTCGGGATCTTGCACTTGGTCTTGCATCT CAGACAGTTCTTGGTGCTGCAACCATGGTAAACAAGACTGGAAAACATCCGGGTCAGCTG AAGGATATGGTCACTTCCCCGGCAGGAACCACCATAACTGGGATACAAGAGCTTGAGAAG GGTGCATTCCGTGGGACGCTGATAAATGCCGTTGTTGCTGCTACAAAGCGTTGCCGTGAA CTTTCTCAGAGTTAA

Peptide Sequence

PEP ID	Os01t0948400-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:41718639:41721571:-1 gene:Os01g0948400 transcript:Os01t0948400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRROLINE-5-CARBOXYLATE REDUCTASE description:Similar to Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase). (Os01t0948400-01);Similar to pyrroline 5-carboxylate reductase. (Os01t0948400-02)
Sequence	MAAPPQPVPAPAAASPEVFRLGFIGPGNLAESIARGVAASGVLPATAIRTAPHRRPERAE AFSSIGAHILETNAQVVDDSDVIVISVKPQIVRQVLVELKPLLSEEKLLVSIAAGIKMED LQGWSGHRRFIRVMPNTPSAVGQAASVMCLGEMATENDENRVRSLFSAIGKVWTAEEKYF DAVTGLSGSGPAYIFLAIEAMADGGVAAGLPRDLALGLASQTVLGAATMVNKTGKHPGQL KDMVTSPAGTTITGIQELEKGAFRGTLINAVVAATKRCRELSQS

Transcript Sequence

Transcript ID	Os01t0948400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41718639:41721571:-1 gene:Os01g0948400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRROLINE-5-CARBOXYLATE REDUCTASE description:Similar to Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase). (Os01t0948400-01);Similar to pyrroline 5-carboxylate reductase. (Os01t0948400-02)
Sequence	GGCCCCCGGCCAAGTGACGAGCAAAACCCACCCAAAAAAAAAATACAGCGGAGACGCGCG ACGGCGGCGCAGTTCCCCGCTCCGCCGCTCCGTGCTCCGACCTCCGGCGACCCCGGGCAC CGGCGAGTGGCCCCGACGGCCATCCAGCTTGTCAGCATTATTAGGCCTCGAAACCTACCT TCCACATCCACGCCATTCTTCTCCGCCTCCTCCTCCTCCTCCTCCTCCTCGGATCCCTCG CAATGGCGGCGCCGCCTCAGCCCGTGCCGGCGCCCGCGGCCGCGTCGCCGGAGGTGTTCC GGCTCGGGTTCATCGGCCCGGGTAACCTCGCGGAGAGCATCGCCCGCGGCGTGGCGGCGT CGGGCGTCCTCCCGGCCACCGCGATCCGCACCGCGCCACACCGCCGCCCCGAGCGCGCCG AGGCCTTCTCATCCATCGGAGCTCACATCTTGGAGACCAACGCGCAGGTAGTTGATGACA GTGACGTGATCGTCATCTCTGTGAAGCCGCAGATCGTAAGGCAGGTACTGGTTGAGCTAA AACCCTTGCTGTCAGAAGAAAAGCTTCTGGTGTCCATTGCTGCTGGCATCAAGATGGAAG ATCTGCAGGGTTGGTCTGGTCATCGAAGATTTATTAGAGTAATGCCAAACACCCCTTCAG CTGTTGGACAAGCAGCATCAGTGATGTGTTTGGGGGAGATGGCTACTGAGAATGATGAAA ACCGTGTAAGAAGTTTATTCAGTGCCATTGGAAAAGTTTGGACAGCTGAAGAAAAATATT TTGATGCTGTAACTGGGCTAAGTGGTAGTGGCCCGGCTTATATTTTCTTAGCAATAGAGG CCATGGCTGATGGTGGAGTTGCTGCTGGTCTTCCTCGGGATCTTGCACTTGGTCTTGCAT CTCAGACAGTTCTTGGTGCTGCAACCATGGTAAACAAGACTGGAAAACATCCGGGTCAGC TGAAGGATATGGTCACTTCCCCGGCAGGAACCACCATAACTGGGATACAAGAGCTTGAGA AGGGTGCATTCCGTGGGACGCTGATAAATGCCGTTGTTGCTGCTACAAAGCGTTGCCGTG AACTTTCTCAGAGTTAATCCTCTTGTTAGTTGTTAGTCCATTGGATGTGCGACTCTGCGC ACGATTTCCCCTAGGGAAGAGGATGTGCGAATATTGATATTTAAACCTGATGAGGCTATC AGCAAATTTTGCTTGTAGTTTTATCCGAATAATTTGCTGCACTTTAGTGGCACGAAATCT GGATGATGTTAGATTGATACTTATTCTGGCAGCAGCTGTTTTTGATCGTTTTTGTTGGG