Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0948300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:41716035:41718600:1 gene:Os01g0948300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein. (Os01t0948300-01)
Sequence	ATGGCGCTCGCGCAGGGCACCGGCGACTTCTCCGTGGTGGTGCTGGGCTCCGACTTCGCG GTCGACGCCGGCGCCGTGCTCCTCAACCCGGCCGACCGGGAGGAGTGGCACGACTGCCTC CCCGACCTCTCCGCGCCCGCCGACGGCGAGGACTTCTCCGACCTCGAAGAGCTCCAGGTC GTCCGCGTCCAGGGCACCGACAGGGCCGGGAGGCGCATCGTCCGCGTCGTCGGCAGGTTC TTCCCTGCTCCTGTCATAGGTGGTGATCGTCTGAAGAAGTATGTTCTTCACAAGCTGCGC ACCGAATTGCCAGAGGGGCCATTCTGCCTTTTGTACATGCACAGCACTGTGCAGTCAGAT GATAACAACCCTGGTATGTCAATCTTGAGGGGGGTCTATGAAGATCTTCCACCTGAATAC AAGGAGAGACTGCAGATCTTATACTTCTTGCATCCTGGGCTTCGCTCTAGGTTGGCCATC GCCACGCTTGGCAGGCTCTTTTTAAGTGGAGGTTTGTATTGGAAAATCAAGTATGTTAGT CGGCTGGAGTATCTTTGGGGGGACATCAGAAAGGGGGAAGTTGAAATTCCAGATTTCGTG ATTGATCATGATAAGATTCTTGAGCACCGACCACTGACAGACTATGGCATAGAACCAGAT CCTCTGCATCTTGCTGATATGCCTGCTGTGGGGTACTCGCTCGGAAGGTATGAAGACAAA TGGTCTCCTGAAGATCGATGGTATTCTCGCAATTACATGTGA

Peptide Sequence

PEP ID	Os01t0948300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:41716035:41718600:1 gene:Os01g0948300 transcript:Os01t0948300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein. (Os01t0948300-01)
Sequence	MALAQGTGDFSVVVLGSDFAVDAGAVLLNPADREEWHDCLPDLSAPADGEDFSDLEELQV VRVQGTDRAGRRIVRVVGRFFPAPVIGGDRLKKYVLHKLRTELPEGPFCLLYMHSTVQSD DNNPGMSILRGVYEDLPPEYKERLQILYFLHPGLRSRLAIATLGRLFLSGGLYWKIKYVS RLEYLWGDIRKGEVEIPDFVIDHDKILEHRPLTDYGIEPDPLHLADMPAVGYSLGRYEDK WSPEDRWYSRNYM

Transcript Sequence

Transcript ID	Os01t0948300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41716035:41718600:1 gene:Os01g0948300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein. (Os01t0948300-01)
Sequence	GGTAGGTGGTGGATGGCCGGCGCGGGGATCGACCGCGTGACGGCGTGAGGTGCGGCGGCG GCGGCGGCCATGGCGCTCGCGCAGGGCACCGGCGACTTCTCCGTGGTGGTGCTGGGCTCC GACTTCGCGGTCGACGCCGGCGCCGTGCTCCTCAACCCGGCCGACCGGGAGGAGTGGCAC GACTGCCTCCCCGACCTCTCCGCGCCCGCCGACGGCGAGGACTTCTCCGACCTCGAAGAG CTCCAGGTCGTCCGCGTCCAGGGCACCGACAGGGCCGGGAGGCGCATCGTCCGCGTCGTC GGCAGGTTCTTCCCTGCTCCTGTCATAGGTGGTGATCGTCTGAAGAAGTATGTTCTTCAC AAGCTGCGCACCGAATTGCCAGAGGGGCCATTCTGCCTTTTGTACATGCACAGCACTGTG CAGTCAGATGATAACAACCCTGGTATGTCAATCTTGAGGGGGGTCTATGAAGATCTTCCA CCTGAATACAAGGAGAGACTGCAGATCTTATACTTCTTGCATCCTGGGCTTCGCTCTAGG TTGGCCATCGCCACGCTTGGCAGGCTCTTTTTAAGTGGAGGTTTGTATTGGAAAATCAAG TATGTTAGTCGGCTGGAGTATCTTTGGGGGGACATCAGAAAGGGGGAAGTTGAAATTCCA GATTTCGTGATTGATCATGATAAGATTCTTGAGCACCGACCACTGACAGACTATGGCATA GAACCAGATCCTCTGCATCTTGCTGATATGCCTGCTGTGGGGTACTCGCTCGGAAGGTAT GAAGACAAATGGTCTCCTGAAGATCGATGGTATTCTCGCAATTACATGTGAGAATTTGAT AGCTTGATGGTATTCTCGCAATTTGATAGCCGAAGCATTCAAGATTCATGTATATATAAT AAAACTGTATGGTAATGTTGTGTGATTGTCAGTTTGTTGGGAATTCATATAGGGCTGCTT CGGCATCGTAGGGTATATATTGCATGCAAAAGGCATACATTTCAATTTCCCAATTTAATC TCCGTCGAACACTATGCCCAGTCGAACACTATGCCTAATGTTGTTTGACAGTCGACATAT AGTGATTGAGAACTGTAAGCGTAATTACATCTTATGTCTTTTATGTTTTCTGTGAAGTTC TTGACATTCCAG