Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0947000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:41629302:41631696:1 gene:Os01g0947000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-1,3-glucanase precursor. (Os01t0947000-01)
Sequence	ATGGGAGCTGTCAATGGTGTTTGCTACGGTGTTCTTGGCGACAACCTCCCGCCGCGGAGC GAGGTCGTGCAGCTGCTCAAGTCCCAAGGCATCGGCGCGATGCGCATCTACTACCCGGAC AAGGAGGCCCTCGACGCGCTCCGCGGCAGCGGCATCGCCATCATCGTCGACGTCGGCGAC AGCGGCGCGGTGGCCAACCTCGCCAGCAACCCCTCCGCCGCCGGCGACTGGGTCCGGGAC AACGTCGAGGCCTACTGGCCGAGCGTCATCATCCGCTACATCACCGTCGGCAACGAGCTC CCCGCCGGCGACATGGGCCTCATCCTCCCGGCCATGCAGAACGTGCACAAGGCCCTCGTG TCCGCCGGCCTCTCGAGCAGCATCAAGGTGTCGACGGCGATCAAGATGGACGTGGTCGCC AACACGTTCCCTCCGTCGCACGGCGTGTTCCGCCCCGACGTGCAGCAGTTCATGGCTCCC ATCGCGCGGTTCCTCGCCAACACCGTGTCGCCGCTGCTCGTCAACGTGTACCCCTACGTC TCCTACAGGGAGAACCCGCGCGACATCAGCCTCAACTACGCCACGTTCCAGCCGGGCACC ACGGTGAGGGACAGCGACAGCGGCCTCACCTACACCAACCTCTTCAACGCCATGGTGGAC GCCGTGTACGCCGCGCTGGAGAAGGCCGGCACGCCCAACGTCCGCATCGCCGTGTCGGAG ACCGGGTGGCCGTCGGCGGGAGGGTTCGCGGCGACGGCAGAGAACGCGATGAACCACAAC CAGGGCGTGATCGACAACGTCAAGAACGGGACGCCGAAGCGGCCCGGGCCACTGGAGACG TACGTGTTCGCCATGTTCAACGAGAACCAGCAGACTGGCGATGAGACCAGGAGGCATTTC GGCCTCTTCAACCCTGACAAGACGCCGGCCTACCCGATTACACCTTATCCTCGTCCAGCC GTGCAATCCATCGGCGTGTGCTACGGCATGGTGGGCAACGATCTCCCGTCACGTAGCGAG GTGGTGCAGATGTACGTGTCCCTGGGCATCAATCGGATGCGCATCTACAATCCCGACAGG GAGGCGCTGGACGCCCTGCGCAACTCCGGCATCGACCTCATCCTCGACGCTGGCGGCTTC GACACGGTGTCCTATCTCGCCGCCAGCTCCTCCAACGCGGCGTCATGGGTCCACGACAAT ATCAGCCCCTACTACCCGGCCGTCAACATCAAGTACATCGCCGTCGGCAACGAGGTGGTA GGCGGCACCACGGAGAGCATCCTCCCGGCCATGCGCAACGTCAACTCCGCCCTTGCCGCG GCCGGCATCGGCGGCATCAAGGTTTCCACCGCGGTGAAATCCGACGTGATCGCCAACTCT TACCCTCCCTCCGCCGGCGTGTTCGCGTATCCCTACATGAATGGCATAGCTCAGTACCTG GCGAGCACTGGCGCGCCGCTGCTGGCCAACGTCTACCCCTACTTCGCCTACGCCGGCAAC CCGCGCGAGATCAGCCTCAACTACGCCACGTTCCAGCCGGGCACGACGGTGAGGGACGAC GGCAACGGGCTCACCTACACCAACCTGTTCGACGCCATGGTGGACTGCATCTACGCCGCG CTGGAGAAGGCCGACGCCGGGAACGTGAGGGTGGTGGTGTCGGAGAGCGGGTGGCCGTCG GCGGAAGGGATCGGGGCGAGCATGGACAACGCGAGGGCGTACAACCAGGGGCTGATCGAC CATGTCGGGCGTGGCACGCCCAAGAGGCCCGGACAGATGGAGGCGTACATATTTGCCATG TTCAACGAGAACCAGAAGACAGGGGCTGCCACCGAGAGGCATTTTGGCCTCTTCTACCCT AACAAGTCGCCGGTCTATCAGATTGCCTTTTCGAATTAG

Peptide Sequence

PEP ID	Os01t0947000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:41629302:41631696:1 gene:Os01g0947000 transcript:Os01t0947000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-1,3-glucanase precursor. (Os01t0947000-01)
Sequence	MGAVNGVCYGVLGDNLPPRSEVVQLLKSQGIGAMRIYYPDKEALDALRGSGIAIIVDVGD SGAVANLASNPSAAGDWVRDNVEAYWPSVIIRYITVGNELPAGDMGLILPAMQNVHKALV SAGLSSSIKVSTAIKMDVVANTFPPSHGVFRPDVQQFMAPIARFLANTVSPLLVNVYPYV SYRENPRDISLNYATFQPGTTVRDSDSGLTYTNLFNAMVDAVYAALEKAGTPNVRIAVSE TGWPSAGGFAATAENAMNHNQGVIDNVKNGTPKRPGPLETYVFAMFNENQQTGDETRRHF GLFNPDKTPAYPITPYPRPAVQSIGVCYGMVGNDLPSRSEVVQMYVSLGINRMRIYNPDR EALDALRNSGIDLILDAGGFDTVSYLAASSSNAASWVHDNISPYYPAVNIKYIAVGNEVV GGTTESILPAMRNVNSALAAAGIGGIKVSTAVKSDVIANSYPPSAGVFAYPYMNGIAQYL ASTGAPLLANVYPYFAYAGNPREISLNYATFQPGTTVRDDGNGLTYTNLFDAMVDCIYAA LEKADAGNVRVVVSESGWPSAEGIGASMDNARAYNQGLIDHVGRGTPKRPGQMEAYIFAM FNENQKTGAATERHFGLFYPNKSPVYQIAFSN

Transcript Sequence

Transcript ID	Os01t0947000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41629302:41631696:1 gene:Os01g0947000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-1,3-glucanase precursor. (Os01t0947000-01)
Sequence	GACGATCAGGAGCGAGCATTGAAGCATACGTATATCCATCTCCAGAAACTCGATCAAGCA TACTAGCTGAGACAGATCGAGTCACCTAGCTATTTGAGCAAATGGGAGCTGTCAATGGTG TTTGCTACGGTGTTCTTGGCGACAACCTCCCGCCGCGGAGCGAGGTCGTGCAGCTGCTCA AGTCCCAAGGCATCGGCGCGATGCGCATCTACTACCCGGACAAGGAGGCCCTCGACGCGC TCCGCGGCAGCGGCATCGCCATCATCGTCGACGTCGGCGACAGCGGCGCGGTGGCCAACC TCGCCAGCAACCCCTCCGCCGCCGGCGACTGGGTCCGGGACAACGTCGAGGCCTACTGGC CGAGCGTCATCATCCGCTACATCACCGTCGGCAACGAGCTCCCCGCCGGCGACATGGGCC TCATCCTCCCGGCCATGCAGAACGTGCACAAGGCCCTCGTGTCCGCCGGCCTCTCGAGCA GCATCAAGGTGTCGACGGCGATCAAGATGGACGTGGTCGCCAACACGTTCCCTCCGTCGC ACGGCGTGTTCCGCCCCGACGTGCAGCAGTTCATGGCTCCCATCGCGCGGTTCCTCGCCA ACACCGTGTCGCCGCTGCTCGTCAACGTGTACCCCTACGTCTCCTACAGGGAGAACCCGC GCGACATCAGCCTCAACTACGCCACGTTCCAGCCGGGCACCACGGTGAGGGACAGCGACA GCGGCCTCACCTACACCAACCTCTTCAACGCCATGGTGGACGCCGTGTACGCCGCGCTGG AGAAGGCCGGCACGCCCAACGTCCGCATCGCCGTGTCGGAGACCGGGTGGCCGTCGGCGG GAGGGTTCGCGGCGACGGCAGAGAACGCGATGAACCACAACCAGGGCGTGATCGACAACG TCAAGAACGGGACGCCGAAGCGGCCCGGGCCACTGGAGACGTACGTGTTCGCCATGTTCA ACGAGAACCAGCAGACTGGCGATGAGACCAGGAGGCATTTCGGCCTCTTCAACCCTGACA AGACGCCGGCCTACCCGATTACACCTTATCCTCGTCCAGCCGTGCAATCCATCGGCGTGT GCTACGGCATGGTGGGCAACGATCTCCCGTCACGTAGCGAGGTGGTGCAGATGTACGTGT CCCTGGGCATCAATCGGATGCGCATCTACAATCCCGACAGGGAGGCGCTGGACGCCCTGC GCAACTCCGGCATCGACCTCATCCTCGACGCTGGCGGCTTCGACACGGTGTCCTATCTCG CCGCCAGCTCCTCCAACGCGGCGTCATGGGTCCACGACAATATCAGCCCCTACTACCCGG CCGTCAACATCAAGTACATCGCCGTCGGCAACGAGGTGGTAGGCGGCACCACGGAGAGCA TCCTCCCGGCCATGCGCAACGTCAACTCCGCCCTTGCCGCGGCCGGCATCGGCGGCATCA AGGTTTCCACCGCGGTGAAATCCGACGTGATCGCCAACTCTTACCCTCCCTCCGCCGGCG TGTTCGCGTATCCCTACATGAATGGCATAGCTCAGTACCTGGCGAGCACTGGCGCGCCGC TGCTGGCCAACGTCTACCCCTACTTCGCCTACGCCGGCAACCCGCGCGAGATCAGCCTCA ACTACGCCACGTTCCAGCCGGGCACGACGGTGAGGGACGACGGCAACGGGCTCACCTACA CCAACCTGTTCGACGCCATGGTGGACTGCATCTACGCCGCGCTGGAGAAGGCCGACGCCG GGAACGTGAGGGTGGTGGTGTCGGAGAGCGGGTGGCCGTCGGCGGAAGGGATCGGGGCGA GCATGGACAACGCGAGGGCGTACAACCAGGGGCTGATCGACCATGTCGGGCGTGGCACGC CCAAGAGGCCCGGACAGATGGAGGCGTACATATTTGCCATGTTCAACGAGAACCAGAAGA CAGGGGCTGCCACCGAGAGGCATTTTGGCCTCTTCTACCCTAACAAGTCGCCGGTCTATC AGATTGCCTTTTCGAATTAGCAGCTGCCAATATAAATGAGTTACAGCCTTACAGGTGATC GATCGAGTAATGCTTCATTAAATGTTGGGCGTATTTTAATGTTCTCAGTATGTTACTTTA TGTTTTATAATAAAAGCTACATGAATATAAACTTTTCAAGGTTTCTTATCGATTGAC