Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0945300-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:41554997:41559267:-1 gene:Os01g0945300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bi-directional amino acid transporter 4 description:Amino acid/polyamine transporter I family protein. (Os01t0945300-01);Amino acid/polyamine transporter I family protein. (Os01t0945300-02)
Sequence	ATGGCGCTCTCTCGCTCCGTCGAGGTGGCCGTGCCCGCCGATCCGGCCGGCGATGGCGAT CGAGATAAAATTCGGCTGCGGCAGCTCGGCTACAAGCAAGAGCTGAAGCGCGGCCTCTCT GTTCTCTCCAACTTCGCCTTCTCCTTCTCCATCATCTCCGTGATGGCCGGTGTGACGACG ACGTACAGCACGGGGCTCCGCTACGGCGGGCCGGTGTCCATGACGCTCGGGTGGCTCGTC GTGTCCGCCTTCAACGGCTGCATGGCCCTGTCCATGGCCGAGATCTGCTCCGCCTACCCG ACCTCCGGTGGCCTCTACTACTGGAGTGCCAAGCTCGCCGGCAACGACTGGGCTCCCTTT GCTTCTTGGATCACTGGCTGGTTTAACATCACGGGACAGTGGGCCGCTACCACGAGCGTG GACTTCGCGTTGGCGCAGTTGGTCCAGGTGATCGTCTTGCTCAGCACCGGTGGAGCCAAC GGCGGTGGCTACATGGCCTCCAACTACGTCGTGCTCGCCATCTACGGCGCCATGCTCGTC ATCCACGGCGCTATCAACAGCCTCCCGATCCAGTGCCTCTCTTGGTTCGGCCAGCTTGGA GCTTTTTGGAATGCGGCAGGTGTCTTTGTGCTGGTGGCCTTGATCCCGGCTGTCGCCACG GAAAGGGCGAGCGTTGAGTTCATTTTCACTCACTTCAACACAGAAAACGGCATGGGGATA CGCGACAAGGCTTACATTTTACTCATCGGGTTGTTGATGAGCCAGTACGCGATGGCCGGC TACGACACATCTGCTCATATGACAGAGGAAACGAAGAATGCAGATTGGAGTGGCCCGATC GGGATCGTAACCTCGGTTGCTCTCTCGACCGTGTTCGGGTGGATCTACATAGTGTCACTC ACGTCGGCGGTGACGGACATTCCCTACCTGTTGAGCCCCGACAACGACGCCGGCGGCAAC GCGGTTGCTCAAGCTTTCTACACCACTTTCCACCGGAGATACGGCAGCGGCCTGGGAGGG ATCCTCTGCTTGGGAGTCGTCGCTGTCGCCGTCTTCCTCTGCGGCCTCGCCTGCATCACT AGCAACTCGAGGATGGCGTATGCGTTCTCCAGGGACGGAGCAATGCCGTTCTCGAAAGTC TGGCACCGAGTGAACAAGCAAGAGGTGCCTATAAACGCCGTATGGCTCTCTGTGGTGGTG GCGTTCATCATGGCTCTGACATCGCTGGGAAGCCAGGTGGCATTCCAAGCAATGGTGTCC ATCGCGACGATAGGGCTCTGCATCTCCTACGCGCTGCCGATCTTCTTCCGGGTGACGACG GCGAGGGGATCCTTCGTTCCGGGGCCGTTTCACCTTGGCAAGTACGGGATCGTCGTCGGC TGGGCCGCCGTGCTCTGGGTGGCCGCCGTCACCGTGCTCTTCTCGCTGCCGGTGGCGTAC CCGGTGGCGGAGGAGACGTTCAACTACACGCCGGTGGCCGTCGGCGGCGTGCTGCTGCTC ACCGTCGGCGCGTGGGCTCTCCGTGCCCGCTTCTGGTTCCAAGGGCCCATTACTAACACT AATGACGGCCCGCTGTGA

Peptide Sequence

PEP ID	Os01t0945300-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:41554997:41559267:-1 gene:Os01g0945300 transcript:Os01t0945300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bi-directional amino acid transporter 4 description:Amino acid/polyamine transporter I family protein. (Os01t0945300-01);Amino acid/polyamine transporter I family protein. (Os01t0945300-02)
Sequence	MALSRSVEVAVPADPAGDGDRDKIRLRQLGYKQELKRGLSVLSNFAFSFSIISVMAGVTT TYSTGLRYGGPVSMTLGWLVVSAFNGCMALSMAEICSAYPTSGGLYYWSAKLAGNDWAPF ASWITGWFNITGQWAATTSVDFALAQLVQVIVLLSTGGANGGGYMASNYVVLAIYGAMLV IHGAINSLPIQCLSWFGQLGAFWNAAGVFVLVALIPAVATERASVEFIFTHFNTENGMGI RDKAYILLIGLLMSQYAMAGYDTSAHMTEETKNADWSGPIGIVTSVALSTVFGWIYIVSL TSAVTDIPYLLSPDNDAGGNAVAQAFYTTFHRRYGSGLGGILCLGVVAVAVFLCGLACIT SNSRMAYAFSRDGAMPFSKVWHRVNKQEVPINAVWLSVVVAFIMALTSLGSQVAFQAMVS IATIGLCISYALPIFFRVTTARGSFVPGPFHLGKYGIVVGWAAVLWVAAVTVLFSLPVAY PVAEETFNYTPVAVGGVLLLTVGAWALRARFWFQGPITNTNDGPL

Transcript Sequence

Transcript ID	Os01t0945300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41554997:41559267:-1 gene:Os01g0945300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bi-directional amino acid transporter 4 description:Amino acid/polyamine transporter I family protein. (Os01t0945300-01);Amino acid/polyamine transporter I family protein. (Os01t0945300-02)
Sequence	GTAAAGTTTTTGCAAATCTACTGCAAAGGAAGCACGATACAGATGGCGCTCTCTCGCTCC GTCGAGGTGGCCGTGCCCGCCGATCCGGCCGGCGATGGCGATCGAGATAAAATTCGGCTG CGGCAGCTCGGCTACAAGCAAGAGCTGAAGCGCGGCCTCTCTGTTCTCTCCAACTTCGCC TTCTCCTTCTCCATCATCTCCGTGATGGCCGGTGTGACGACGACGTACAGCACGGGGCTC CGCTACGGCGGGCCGGTGTCCATGACGCTCGGGTGGCTCGTCGTGTCCGCCTTCAACGGC TGCATGGCCCTGTCCATGGCCGAGATCTGCTCCGCCTACCCGACCTCCGGTGGCCTCTAC TACTGGAGTGCCAAGCTCGCCGGCAACGACTGGGCTCCCTTTGCTTCTTGGATCACTGGC TGGTTTAACATCACGGGACAGTGGGCCGCTACCACGAGCGTGGACTTCGCGTTGGCGCAG TTGGTCCAGGTGATCGTCTTGCTCAGCACCGGTGGAGCCAACGGCGGTGGCTACATGGCC TCCAACTACGTCGTGCTCGCCATCTACGGCGCCATGCTCGTCATCCACGGCGCTATCAAC AGCCTCCCGATCCAGTGCCTCTCTTGGTTCGGCCAGCTTGGAGCTTTTTGGAATGCGGCA GGTGTCTTTGTGCTGGTGGCCTTGATCCCGGCTGTCGCCACGGAAAGGGCGAGCGTTGAG TTCATTTTCACTCACTTCAACACAGAAAACGGCATGGGGATACGCGACAAGGCTTACATT TTACTCATCGGGTTGTTGATGAGCCAGTACGCGATGGCCGGCTACGACACATCTGCTCAT ATGACAGAGGAAACGAAGAATGCAGATTGGAGTGGCCCGATCGGGATCGTAACCTCGGTT GCTCTCTCGACCGTGTTCGGGTGGATCTACATAGTGTCACTCACGTCGGCGGTGACGGAC ATTCCCTACCTGTTGAGCCCCGACAACGACGCCGGCGGCAACGCGGTTGCTCAAGCTTTC TACACCACTTTCCACCGGAGATACGGCAGCGGCCTGGGAGGGATCCTCTGCTTGGGAGTC GTCGCTGTCGCCGTCTTCCTCTGCGGCCTCGCCTGCATCACTAGCAACTCGAGGATGGCG TATGCGTTCTCCAGGGACGGAGCAATGCCGTTCTCGAAAGTCTGGCACCGAGTGAACAAG CAAGAGGTGCCTATAAACGCCGTATGGCTCTCTGTGGTGGTGGCGTTCATCATGGCTCTG ACATCGCTGGGAAGCCAGGTGGCATTCCAAGCAATGGTGTCCATCGCGACGATAGGGCTC TGCATCTCCTACGCGCTGCCGATCTTCTTCCGGGTGACGACGGCGAGGGGATCCTTCGTT CCGGGGCCGTTTCACCTTGGCAAGTACGGGATCGTCGTCGGCTGGGCCGCCGTGCTCTGG GTGGCCGCCGTCACCGTGCTCTTCTCGCTGCCGGTGGCGTACCCGGTGGCGGAGGAGACG TTCAACTACACGCCGGTGGCCGTCGGCGGCGTGCTGCTGCTCACCGTCGGCGCGTGGGCT CTCCGTGCCCGCTTCTGGTTCCAAGGGCCCATTACTAACACTAATGACGGCCCGCTGTGA CGGCCCATAACTGTATGGGCCGATGCATGTGTGCTACGGCCCATGGAGTTCTACGGCTGA CAAGGAAGCCCACGTACATGTAGCCTTGTTGGGCGGCCCAGTAAGAGGCCGTTCTTTATT TTGATTCGTATTCCCATGTCCTTGGATGG