Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0940600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:41343327:41344264:1 gene:Os01g0940600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0940600-01)
Sequence

ATGGCGGCGCGAGGTCTCGCTGCTCTCTCCTCCCCGGCGCGCGTCGGCGCGAGCGCTACG
CCGTGCTCTGGGAGGCCTGTCCGTGTATCGGCTACGCCGGCAGCGGGCGGCTGGCGGCGG
CGGCGGCGGTCCATGGTCGTGCGGGCCGGCGGGCCGCCGAGCACGAACGCGCTCATCCTG
GCGTTCGTCCTGCCGCTCTCCCTCTTCGTCGGCACGCTCATCACCGCCGCCCGCGTCGCC
GACGACCTCGACGAGCGCTTCCTACGCGAGATGGAGTCCAACAAAGCGATAATGGAAGAG
AATGAGGACTTCGAGCAAGACGGCGGAGGCGAAGAAGAGGAGGAGGACGCCGAGCAGCCG
GCGCCAGTGGAGAAGGAGGGAGTTCTTGTTGCTGCTGCTCCGCGCACTAGAAACAGGCCA
AAGAGGGAGGTACAGTAG

Peptide Sequence

PEP ID

Os01t0940600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:41343327:41344264:1 gene:Os01g0940600 transcript:Os01t0940600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0940600-01)
Sequence

MAARGLAALSSPARVGASATPCSGRPVRVSATPAAGGWRRRRRSMVVRAGGPPSTNALIL
AFVLPLSLFVGTLITAARVADDLDERFLREMESNKAIMEENEDFEQDGGGEEEEEDAEQP
APVEKEGVLVAAAPRTRNRPKREVQ

Transcript Sequence

Transcript ID

Os01t0940600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:41343327:41344264:1 gene:Os01g0940600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0940600-01)
Sequence

GCTCACTCTGCTGCTCTGCTTCTGCTTGCCTGTGCTGTGCTGTGTGTGTGGCCTTCGCTA
CCATCCATGGCGGCGCGAGGTCTCGCTGCTCTCTCCTCCCCGGCGCGCGTCGGCGCGAGC
GCTACGCCGTGCTCTGGGAGGCCTGTCCGTGTATCGGCTACGCCGGCAGCGGGCGGCTGG
CGGCGGCGGCGGCGGTCCATGGTCGTGCGGGCCGGCGGGCCGCCGAGCACGAACGCGCTC
ATCCTGGCGTTCGTCCTGCCGCTCTCCCTCTTCGTCGGCACGCTCATCACCGCCGCCCGC
GTCGCCGACGACCTCGACGAGCGCTTCCTACGCGAGATGGAGTCCAACAAAGCGATAATG
GAAGAGAATGAGGACTTCGAGCAAGACGGCGGAGGCGAAGAAGAGGAGGAGGACGCCGAG
CAGCCGGCGCCAGTGGAGAAGGAGGGAGTTCTTGTTGCTGCTGCTCCGCGCACTAGAAAC
AGGCCAAAGAGGGAGGTACAGTAGAGTGGAAGAGCAGAAAAAGCATCTCGGTTTTTCTTG
TTCCTTATATGTGATCATCGCCTTGCAAATGCTTCCGTTGGATTGACAAATTATGCAATG
GATGCAAGAGCCAATTAATTTAGTCAATAGTCATAGGCCCAAGCATTCAGAGGTTAGAGA
AATGATTGGTGTACGTGGCCTGTAGTTTAGAACATCAGATGGAGGAATGTGCAGCCTTAA
GACGGCTCAGCTCAGCTGTGCAGGTTACAGCTGGAGAGGAGTCTGCTACTAGAAGAATCG
TCCTGAGTTCAAATCTGCTTTGTTTCAGAATCGTATCAAATACCGAAATACTACTTG