Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0940100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:41305718:41311135:-1 gene:Os01g0940100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEXOKINASE-3 description:Similar to Hexokinase. (Os01t0940100-01);Similar to Hexokinase-3. (Os01t0940100-02)
Sequence

AACTTTGTTGCCCTGGCACTAAAGAATTTTCTTGAAGGAGAAGATGACCAAGATGGAAAA
ATGGCACTTGGTTTTACATTTTCTTTCCCTGTTAGACAAATTTCAGTGTCTTCAGGGTCA
TTAATTAGGTGGACAAAAGGATTTTCCATCAGAGACACGGTTGGCAGAGATGTTGCTCAG
TGCTTAAATGAAGCGCTTGCCAATTGTGGGCTAAATGTGCGGGTCACTGCATTGGTGAAT
GATACAGTGGGGACATTAGCTCTAGGGCATTACTATGATGAAGACACAGTGGCTGCTGTG
ATAATTGGGTCTGGCACCAACGCTTGCTACATTGAACGCACTGATGCAATTATCAAGTGC
CAGGGTCTTCTAACGAACTCTGGAGGCATGGTAGTAAACATGGAGTGGGGGAATTTCTGG
TCATCACATTTGCCAAGGACGCCATATGACATCTTGCTGGATGATGAAACACACAATCGC
AATGATCAGGGCTTTGAGAAAATGATATCAGGAATGTATCTTGGGGAAATTGCAAGATTG
GTATTTCATAGAATGGCCCAGGAATCAGATGTTTTTGGTGATGCTGCTGATAGTCTATCC
AACCCTTTCATTTTGAGCACACCGTTTCTGGCCGCAATTCGCGAGGACGATTCACCAGAT
CTGAGCGAAGTCAGAAGGATACTTCGAGAACATCTGAAGATTCCCGATGCTCCTCTGAAA
ACTCGACGGCTGGTCGTGAAAGTCTGCGACATTGTGACTCGCAGAGCCGCCCGTCTAGCC
GCTGCAGGCATCGTGGGGATACTGAAGAAGCTGGGGAGGGATGGGAGCGGCGCGGCGTCG
AGCGGGAGAGGTAGAGGGCAGCCGAGGAGGACGGTGGTGGCGATCGAGGGCGGGCTGTAC
CAGGGTTACCCGGTGTTCAGGGAGTACCTGGACGAGGCCCTGGTGGAGATCCTGGGGGAG
GAGGTGGCGCGGAACGTGACGCTGAGGGTGACGGAGGATGGGTCGGGGGTCGGGGCTGCC
CTCCTCGCCGCCGTACATTCGTCGAATAGACAGCAACAAGGAGGTCCCATATAG

Peptide Sequence

PEP ID

Os01t0940100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:41305718:41311135:-1 gene:Os01g0940100 transcript:Os01t0940100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEXOKINASE-3 description:Similar to Hexokinase. (Os01t0940100-01);Similar to Hexokinase-3. (Os01t0940100-02)
Sequence

NFVALALKNFLEGEDDQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVGRDVAQ
CLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTDAIIKC
QGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLGEIARL
VFHRMAQESDVFGDAADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKIPDAPLK
TRRLVVKVCDIVTRRAARLAAAGIVGILKKLGRDGSGAASSGRGRGQPRRTVVAIEGGLY
QGYPVFREYLDEALVEILGEEVARNVTLRVTEDGSGVGAALLAAVHSSNRQQQGGPI

Transcript Sequence

Transcript ID

Os01t0940100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:41305718:41311135:-1 gene:Os01g0940100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEXOKINASE-3 description:Similar to Hexokinase. (Os01t0940100-01);Similar to Hexokinase-3. (Os01t0940100-02)
Sequence

AACTTTGTTGCCCTGGCACTAAAGAATTTTCTTGAAGGAGAAGATGACCAAGATGGAAAA
ATGGCACTTGGTTTTACATTTTCTTTCCCTGTTAGACAAATTTCAGTGTCTTCAGGGTCA
TTAATTAGGTGGACAAAAGGATTTTCCATCAGAGACACGGTTGGCAGAGATGTTGCTCAG
TGCTTAAATGAAGCGCTTGCCAATTGTGGGCTAAATGTGCGGGTCACTGCATTGGTGAAT
GATACAGTGGGGACATTAGCTCTAGGGCATTACTATGATGAAGACACAGTGGCTGCTGTG
ATAATTGGGTCTGGCACCAACGCTTGCTACATTGAACGCACTGATGCAATTATCAAGTGC
CAGGGTCTTCTAACGAACTCTGGAGGCATGGTAGTAAACATGGAGTGGGGGAATTTCTGG
TCATCACATTTGCCAAGGACGCCATATGACATCTTGCTGGATGATGAAACACACAATCGC
AATGATCAGGGCTTTGAGAAAATGATATCAGGAATGTATCTTGGGGAAATTGCAAGATTG
GTATTTCATAGAATGGCCCAGGAATCAGATGTTTTTGGTGATGCTGCTGATAGTCTATCC
AACCCTTTCATTTTGAGCACACCGTTTCTGGCCGCAATTCGCGAGGACGATTCACCAGAT
CTGAGCGAAGTCAGAAGGATACTTCGAGAACATCTGAAGATTCCCGATGCTCCTCTGAAA
ACTCGACGGCTGGTCGTGAAAGTCTGCGACATTGTGACTCGCAGAGCCGCCCGTCTAGCC
GCTGCAGGCATCGTGGGGATACTGAAGAAGCTGGGGAGGGATGGGAGCGGCGCGGCGTCG
AGCGGGAGAGGTAGAGGGCAGCCGAGGAGGACGGTGGTGGCGATCGAGGGCGGGCTGTAC
CAGGGTTACCCGGTGTTCAGGGAGTACCTGGACGAGGCCCTGGTGGAGATCCTGGGGGAG
GAGGTGGCGCGGAACGTGACGCTGAGGGTGACGGAGGATGGGTCGGGGGTCGGGGCTGCC
CTCCTCGCCGCCGTACATTCGTCGAATAGACAGCAACAAGGAGGTCCCATATAGTGAGAG
AGACAATGAAGATACAGCTAGCCCCTCTTGTTCAAATGTAAAAAAGGGACATTGTTTGAT
ATCTATATTCATATATATAAAAATCTGGGTCTTGTGCAGAG