Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0939400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:41236412:41238794:-1 gene:Os01g0939400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0939400-01)
Sequence

ATGTCGCTGGTCGCCTACGACGCCTCGTCCGACGAGGAAGACGCCGGCGGCGAGCCGCCG
GCCGCCGCGGCGGCTTCTCCCGCTCCCGTCCCCTCATCCTTCGGACCTCGGCCGAGGCCT
CCCTCTCCCTCGACGTCGGTCGGCGCCGCTCCTCAGCCTCCGCCCCACAGCCAGAATATT
TCTTCCACTAGTTCAAGTAATATCTCCCTGCCCACACCGTCACTAGACCTTCCAGATGTT
GCAGATCTGTTTTCTTCCCCTTCTCTGCCCTCTAGAGGATCTACTTCTATGATGGACAGC
ACATCAAGGAAACGAGAATCAAATGGATCTGCATTTCAAGACCCACGCAGTAAATTTCCA
AGGGTTCAATCGGGACAATCTCGTGGTGCCAGGATCGCTGCTGGGAACACGTTAGTTCCA
CCACAGCTTAGTGGAAGGAGCAACGTTGTCACTGAAGATATGACCAAGTTGTTTGTGGCT
AGACGCAAAGAGTAG

Peptide Sequence

PEP ID

Os01t0939400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:41236412:41238794:-1 gene:Os01g0939400 transcript:Os01t0939400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0939400-01)
Sequence

MSLVAYDASSDEEDAGGEPPAAAAASPAPVPSSFGPRPRPPSPSTSVGAAPQPPPHSQNI
SSTSSSNISLPTPSLDLPDVADLFSSPSLPSRGSTSMMDSTSRKRESNGSAFQDPRSKFP
RVQSGQSRGARIAAGNTLVPPQLSGRSNVVTEDMTKLFVARRKE

Transcript Sequence

Transcript ID

Os01t0939400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:41236412:41238794:-1 gene:Os01g0939400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0939400-01)
Sequence

TTTCCCCGGCTCGCCCGATGTCGCTGGTCGCCTACGACGCCTCGTCCGACGAGGAAGACG
CCGGCGGCGAGCCGCCGGCCGCCGCGGCGGCTTCTCCCGCTCCCGTCCCCTCATCCTTCG
GACCTCGGCCGAGGCCTCCCTCTCCCTCGACGTCGGTCGGCGCCGCTCCTCAGCCTCCGC
CCCACAGCCAGAATATTTCTTCCACTAGTTCAAGTAATATCTCCCTGCCCACACCGTCAC
TAGACCTTCCAGATGTTGCAGATCTGTTTTCTTCCCCTTCTCTGCCCTCTAGAGGATCTA
CTTCTATGATGGACAGCACATCAAGGAAACGAGAATCAAATGGATCTGCATTTCAAGACC
CACGCAGTAAATTTCCAAGGGTTCAATCGGGACAATCTCGTGGTGCCAGGATCGCTGCTG
GGAACACGTTAGTTCCACCACAGCTTAGTGGAAGGAGCAACGTTGTCACTGAAGATATGA
CCAAGTTGTTTGTGGCTAGACGCAAAGAGTAGTGCTGATGTTTTTGTTAGCCTCTAATTG
TAAACCATCAACGAATCTACGGCGCCCCATGGACAGAAGGACCTGATTGGACGATTTGCT
ATTTGCGAATTGTGATCTATAATCCTAGACAGCTGGATTGGGAATGCTCTCTTTTTTCAC
ATTATCTAGTGCCCATGCAATTGATGTTCACTTGTGTTTATGAGCAATCCGTGATATGTT
AAAGCATGTGACAGTGTTAGGAGAACTAGAAACTTGTCTATTCTTAAGAACTAGATGTTG
TTCATCATCTGGTTAGTAAGTAGTAATGGATTACTATCCGCTATGTGGCAAGTTCTACCT
TTACTTAGAAATATGTGCATTATAGCGT