Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0938100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:41187052:41188691:1 gene:Os01g0938100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM II SUBUNIT description:Photosystem II protein Psb28, class 1 domain containing protein. (Os01t0938100-01)
Sequence	ATGGCCGCTGTGATGAAAGCTCTCGCCGTCGCCTCGCCGATCTCGGCACGAGCACAGCCC CGACGATGCCCCGCAGGTTCGTCAGGCGGCCCTAGCCAAAGCCTGCATTCATCGTTCGGC GGCGTCTCCCTGCAGTGCCGGCGCACGAAGCCGGCGTCCCTCCACCGGAGTCGGCCGTCG ATGCAGGTGGTGATGATGGCGGCGAGGCCGGCGATCCAGTTCATCCAGGGCACCGACGAG CAGACGATCCCGGACGTGCGGCTGACCAAGTCCCGGGACGGCACCAACGGCGTGGCCATC TTCACCTTCGACCAGCCGTCGGTGTTCGACTCGTCGGCAGAGCTCGGCGACATCACCGGC TTCTACATGATCGACGACGAGGGCGTGCTCCAGTCGGTGGACGTCAGCGCCAAGTTCGTC AACGGCAAGCCGGCGCTCATCGAGGCCAAGTACGTCATGCGCACGCCGCGGGAGTGGGAC AGGTTCATGCGATTCATGGAGAGGTACTCCCAGGCCAACGGCCTCCAGTTCGTCAAGAAG TGA

Peptide Sequence

PEP ID	Os01t0938100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:41187052:41188691:1 gene:Os01g0938100 transcript:Os01t0938100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM II SUBUNIT description:Photosystem II protein Psb28, class 1 domain containing protein. (Os01t0938100-01)
Sequence	MAAVMKALAVASPISARAQPRRCPAGSSGGPSQSLHSSFGGVSLQCRRTKPASLHRSRPS MQVVMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITG FYMIDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVKK

Transcript Sequence

Transcript ID	Os01t0938100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41187052:41188691:1 gene:Os01g0938100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM II SUBUNIT description:Photosystem II protein Psb28, class 1 domain containing protein. (Os01t0938100-01)
Sequence	CGCTCATCCACCACCACCTCCTCCAAGAGCCACCAAACGGCAGCAGGATGGCCGCTGTGA TGAAAGCTCTCGCCGTCGCCTCGCCGATCTCGGCACGAGCACAGCCCCGACGATGCCCCG CAGGTTCGTCAGGCGGCCCTAGCCAAAGCCTGCATTCATCGTTCGGCGGCGTCTCCCTGC AGTGCCGGCGCACGAAGCCGGCGTCCCTCCACCGGAGTCGGCCGTCGATGCAGGTGGTGA TGATGGCGGCGAGGCCGGCGATCCAGTTCATCCAGGGCACCGACGAGCAGACGATCCCGG ACGTGCGGCTGACCAAGTCCCGGGACGGCACCAACGGCGTGGCCATCTTCACCTTCGACC AGCCGTCGGTGTTCGACTCGTCGGCAGAGCTCGGCGACATCACCGGCTTCTACATGATCG ACGACGAGGGCGTGCTCCAGTCGGTGGACGTCAGCGCCAAGTTCGTCAACGGCAAGCCGG CGCTCATCGAGGCCAAGTACGTCATGCGCACGCCGCGGGAGTGGGACAGGTTCATGCGAT TCATGGAGAGGTACTCCCAGGCCAACGGCCTCCAGTTCGTCAAGAAGTGATCGCCTTTTT TTTTCTCCTTTTTTCCCCCTCACACTGCCTTGAGCATGTACTGTGTGCTCTTTCAGTGTA AATACCTATGAATTCTGATCATCATAAGCTCGATACATGATGAGTTGTTTGGTGTGTGC