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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0937900-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:41179510:41180259:1 gene:Os01g0937900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARABINOGALACTAN PROTEIN 2 description:Conserved hypothetical protein. (Os01t0937900-00)
Sequence

ATGGCGAGCGCCCGCGCGCGCGGCGGGCGAGCCTTCTTCCTCCTCGTACTCGTGCTCGTC
GTCCTCGCGGCGCCCGCGGCCGCGCTGCGGACGTCGGCCATCTCCGCGGCGCCGGAGTAC
CCGCGGCTCCCCACCGGGCCGGGCCACGGCGGCGGGAGGCACGCGGCGCCCGCGCCCGCG
GCGGTCCTCCCGCCGGCGCCGGCGCTCTCGCCGGACATAATGCCGCTGCTCCCGTCCCCG
GGGCCCGACTCCGACGGCTCCGCCGAGGCGCCGTCCGACGTCATGCCCACCATCCCCTCC
AGCCCGAGCCCGCCCAACCCCGACGCGCTCTTGCCGGACTCCGCGCTCGCCCCGTTCGGC
TCCGCGCCCGCCGTCGCCGCCCAGTCCCGCGCGCCGCCGCCGTCGACGACGACGGCGGCG
GCGGCGGCGTGGGCGCTCCCCGTGGCCGTGGGGCTAGTGGCCATGTGGTTGGTGTAG

Peptide Sequence

PEP ID

Os01t0937900-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:41179510:41180259:1 gene:Os01g0937900 transcript:Os01t0937900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARABINOGALACTAN PROTEIN 2 description:Conserved hypothetical protein. (Os01t0937900-00)
Sequence

MASARARGGRAFFLLVLVLVVLAAPAAALRTSAISAAPEYPRLPTGPGHGGGRHAAPAPA
AVLPPAPALSPDIMPLLPSPGPDSDGSAEAPSDVMPTIPSSPSPPNPDALLPDSALAPFG
SAPAVAAQSRAPPPSTTTAAAAAWALPVAVGLVAMWLV

Transcript Sequence

Transcript ID

Os01t0937900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:41179510:41180259:1 gene:Os01g0937900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARABINOGALACTAN PROTEIN 2 description:Conserved hypothetical protein. (Os01t0937900-00)
Sequence

CCCACGCTCACGCACGCTCGCCTCACCACCCACAGCGCACGCGGCCACCAATGGCGAGCG
CCCGCGCGCGCGGCGGGCGAGCCTTCTTCCTCCTCGTACTCGTGCTCGTCGTCCTCGCGG
CGCCCGCGGCCGCGCTGCGGACGTCGGCCATCTCCGCGGCGCCGGAGTACCCGCGGCTCC
CCACCGGGCCGGGCCACGGCGGCGGGAGGCACGCGGCGCCCGCGCCCGCGGCGGTCCTCC
CGCCGGCGCCGGCGCTCTCGCCGGACATAATGCCGCTGCTCCCGTCCCCGGGGCCCGACT
CCGACGGCTCCGCCGAGGCGCCGTCCGACGTCATGCCCACCATCCCCTCCAGCCCGAGCC
CGCCCAACCCCGACGCGCTCTTGCCGGACTCCGCGCTCGCCCCGTTCGGCTCCGCGCCCG
CCGTCGCCGCCCAGTCCCGCGCGCCGCCGCCGTCGACGACGACGGCGGCGGCGGCGGCGT
GGGCGCTCCCCGTGGCCGTGGGGCTAGTGGCCATGTGGTTGGTGTAGTGGGCGAGTGGTG
CAAGCGACAGCAGCTGCAGCTGCAGTTGCAGCCTTCGGGTTCAGTCGTGCAGGAAAAAAA
GTTGGCCGTTGGTTGGTCGGTTGGCTTTGTATTCTTGGCAGCAAAAATTGTGAAGAAATT
GTTGCTTCATTTCACTAAATTTTTTTAGCTTTCGATCTCCTGTAAATTTTTCTGTCAAGT
TTACGTAATTGTTTCTGGATGGGGGCGGCT