Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0937050-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:41139355:41140629:-1 gene:Os01g0937050 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitinase-like protein description:Homolog of xylanase inhibitor, Chitinase-like protein, Defense response against pathogens, Growth regulation through calcium signaling (Os01t0937050-01)
Sequence	ATGTCGCTCCACCTCCTCCTCGCCGTCTCGCTCTGCGTCGCCTTGGCCTCGTCGTTGCCA TGGGCAGCAGCTAGTGCCAATGGCAATGGCAATGGCAAGCCGCTTGTCGCGGCCATCACC AAGGACGCGGCGACCTCGCTCTACACCGTCCCCATCAAGGACGGCCGCCCGCTCGTCCTC GACCTCGCCGGCGCGCTCGTCTGGATGTCGTGCGCCGCCGCGCACCCGACGCTGGAGTGC CACCACCACTTCTGCATGCACGCGCACAGCTACCACCCGCCGGGATGCCCCCACAATGGC TATGGCCGCGCCGACGTCGAGGACCCGTTCCGGTGCAAGTGCACCGCCCACCCGTACAAC CCCTTCTCCGGCGAGTCGGCGACGGCCGACCTGACGCGGACGAGGCTGTCGGCGAACGCC ACCGACGGCAAGAACCCGCTCTACCCGGTGTCGTTCGCCGCCGTCACCTCCTGCGCGCCG GATTCCCTCCTCGCGAAGCTCCCCGCCGGCGCCGTCGGCGTCGCCGGGCTCGCGCGCACC AGGCTCGCGCTGCAGGCGCAGGTGGCGCGGTCGCAGAAGGTCGCCAACAAGTTCGCGCTC TGCCTCCCCAGCGGCGGCGGCGGCGACGGCGTGGCGATCTTCGGCGGCGGCCCGCTCTTC CTCCTCCCGCCGGGGCGTCCCGACGTGGCGGCGACGCTCGCCGGCGAAACTCCCCTCCAC CGCAACAAGGATCTCCCCGGATACTTCATCTCGGCGACCAAGATCGCCGTGAACCAGGAG CAGGTGCAGCTCTACACCCAAGAGCCGCTCGTCGTCGAGCTGTGCACGAGGATCCCGTAC ACGGCGCTCCGGCCGGACGTGTACCGAGCGGTGGTCGACGCGTTCGCCAGGGCCACCGCC GGCCGGAAGCGCGTCACGCCGCCGCCGCCGCCGGCGGCGCCGTTCGAGCTGTGCTACGAC TCGCGCGATCTGGGGTCGACGCGGCTGGGCTACGCCGTGCCGCAGATCGACCTGGTGCTG GAGGGCGGCAAGAACTGGACGGTGTTCGGCGGCAACTCGATGGCGCAGGTGAGCGACAAC ACGGCGTGCCTCGCGGTGGTGAAGGTGAAGGGGGAGAAGGGCAGCCCGCCGCCGCCGGCG GCGATCATCGGAGGGTTCCAGATGGAGAACAACCTGGTGGTGTTCGACGAGGAGAAGCAG CGGCTCGGATTCAGCGGCCTGCTCTGGGGGAGGCAGACCACCTGCAGCAACTTCAACTTC ACTCTCGCCGCCTAG

Peptide Sequence

PEP ID	Os01t0937050-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:41139355:41140629:-1 gene:Os01g0937050 transcript:Os01t0937050-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitinase-like protein description:Homolog of xylanase inhibitor, Chitinase-like protein, Defense response against pathogens, Growth regulation through calcium signaling (Os01t0937050-01)
Sequence	MSLHLLLAVSLCVALASSLPWAAASANGNGNGKPLVAAITKDAATSLYTVPIKDGRPLVL DLAGALVWMSCAAAHPTLECHHHFCMHAHSYHPPGCPHNGYGRADVEDPFRCKCTAHPYN PFSGESATADLTRTRLSANATDGKNPLYPVSFAAVTSCAPDSLLAKLPAGAVGVAGLART RLALQAQVARSQKVANKFALCLPSGGGGDGVAIFGGGPLFLLPPGRPDVAATLAGETPLH RNKDLPGYFISATKIAVNQEQVQLYTQEPLVVELCTRIPYTALRPDVYRAVVDAFARATA GRKRVTPPPPPAAPFELCYDSRDLGSTRLGYAVPQIDLVLEGGKNWTVFGGNSMAQVSDN TACLAVVKVKGEKGSPPPPAAIIGGFQMENNLVVFDEEKQRLGFSGLLWGRQTTCSNFNF TLAA

Transcript Sequence

Transcript ID	Os01t0937050-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:41139355:41140629:-1 gene:Os01g0937050 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitinase-like protein description:Homolog of xylanase inhibitor, Chitinase-like protein, Defense response against pathogens, Growth regulation through calcium signaling (Os01t0937050-01)
Sequence	ATGTCGCTCCACCTCCTCCTCGCCGTCTCGCTCTGCGTCGCCTTGGCCTCGTCGTTGCCA TGGGCAGCAGCTAGTGCCAATGGCAATGGCAATGGCAAGCCGCTTGTCGCGGCCATCACC AAGGACGCGGCGACCTCGCTCTACACCGTCCCCATCAAGGACGGCCGCCCGCTCGTCCTC GACCTCGCCGGCGCGCTCGTCTGGATGTCGTGCGCCGCCGCGCACCCGACGCTGGAGTGC CACCACCACTTCTGCATGCACGCGCACAGCTACCACCCGCCGGGATGCCCCCACAATGGC TATGGCCGCGCCGACGTCGAGGACCCGTTCCGGTGCAAGTGCACCGCCCACCCGTACAAC CCCTTCTCCGGCGAGTCGGCGACGGCCGACCTGACGCGGACGAGGCTGTCGGCGAACGCC ACCGACGGCAAGAACCCGCTCTACCCGGTGTCGTTCGCCGCCGTCACCTCCTGCGCGCCG GATTCCCTCCTCGCGAAGCTCCCCGCCGGCGCCGTCGGCGTCGCCGGGCTCGCGCGCACC AGGCTCGCGCTGCAGGCGCAGGTGGCGCGGTCGCAGAAGGTCGCCAACAAGTTCGCGCTC TGCCTCCCCAGCGGCGGCGGCGGCGACGGCGTGGCGATCTTCGGCGGCGGCCCGCTCTTC CTCCTCCCGCCGGGGCGTCCCGACGTGGCGGCGACGCTCGCCGGCGAAACTCCCCTCCAC CGCAACAAGGATCTCCCCGGATACTTCATCTCGGCGACCAAGATCGCCGTGAACCAGGAG CAGGTGCAGCTCTACACCCAAGAGCCGCTCGTCGTCGAGCTGTGCACGAGGATCCCGTAC ACGGCGCTCCGGCCGGACGTGTACCGAGCGGTGGTCGACGCGTTCGCCAGGGCCACCGCC GGCCGGAAGCGCGTCACGCCGCCGCCGCCGCCGGCGGCGCCGTTCGAGCTGTGCTACGAC TCGCGCGATCTGGGGTCGACGCGGCTGGGCTACGCCGTGCCGCAGATCGACCTGGTGCTG GAGGGCGGCAAGAACTGGACGGTGTTCGGCGGCAACTCGATGGCGCAGGTGAGCGACAAC ACGGCGTGCCTCGCGGTGGTGAAGGTGAAGGGGGAGAAGGGCAGCCCGCCGCCGCCGGCG GCGATCATCGGAGGGTTCCAGATGGAGAACAACCTGGTGGTGTTCGACGAGGAGAAGCAG CGGCTCGGATTCAGCGGCCTGCTCTGGGGGAGGCAGACCACCTGCAGCAACTTCAACTTC ACTCTCGCCGCCTAG