Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0934100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:40973410:40974780:-1 gene:Os01g0934100 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os01t0934100-01)
Sequence

ATGGCGCAGAGGACGCTGGAGCTGACGCTGATCTCGGCCAAGGATCTCAAGGACGTGAAC
CTCCTCTCCAAGATGGAGGTCTACGCCGTCGTCTCGCTCTCCGGCGACCGCCGCTCGCGG
CAGCGGATCGCCACCGACCGCGCCGGTGGCCGCAACCCGGCGTGGAACGCCGCCCCGCTC
CGGTTCACCGTCCCGGCCTCCGGCGCGGGTTCCCTCCACGTCCTCCTCCGCGCCGAGCGC
GCCCTCGGCGACCGCGACGTCGGCGAGGTCCACATCCCCCTCTCGGAGCTCCTCTCCGGC
GCCCCCGACGGCGCCGTCCCCGCCAAGTTCGTCTCCTACCAGGTCCGCAAGATCTCCTCC
GGGAAGCCACAGGGCGTCCTCAATTTCTCCTACAAGATCGGCGAGGTAACCCAATCCGGC
TCCTACCCTGGTGCCTCTCCTCCGGTCGCGTACGGCCAAGCTCCACCGGCGCCAGCTTAC
CCGCCCTCCGCCGCCGCCGCCGCGGCCTACCCGCCCCAATCCACCTACCCACCACCGACC
GCCTACCCAACGGCAGCGAAGGCCGATGGGTCAGCCGCCGCGGCCTACCCACCCCAGTCC
GCCTACCCACCACCGGGCAAGGGAAACGAGCCATCGACGGCTTACCCACCTCCCGCCGGC
TACCCGCCGGCGACCGGAAGTAGTAAGCCGGCGAAGGCGGGTGAGCCGGTGACGGCGTAC
CCAGCCGCCGCGGGGCCGAGCACCGCCGCGCCATACGGCACGGCGCCACCGCCGCAGTAC
GGCTACGGGTACCCGGCCCAGCCGCCGCCGCCGCAAGCCGGCTACGGCTACCCACCCCCG
CCGCCGCAAGCCGGCTACGGCGGCGGCTACGGCTACCCGCCGCAGGCTGGGTACGGCGGC
TACCAGCAGCAGGCCGTGAAGCCGGCGAAGAAGAACAACTTCGGGATGGGACTCGGAGCC
GGGCTGCTCGGCGGCGCGCTCGGCGGCCTCCTCATCGGAGACGCCATCTCCGACGCGTCG
GCGTATGACGCCGGCTACGACGCAGGGTTCGACGACGGCGGTGGCTTCGATTTCTAG

Peptide Sequence

PEP ID

Os01t0934100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:40973410:40974780:-1 gene:Os01g0934100 transcript:Os01t0934100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os01t0934100-01)
Sequence

MAQRTLELTLISAKDLKDVNLLSKMEVYAVVSLSGDRRSRQRIATDRAGGRNPAWNAAPL
RFTVPASGAGSLHVLLRAERALGDRDVGEVHIPLSELLSGAPDGAVPAKFVSYQVRKISS
GKPQGVLNFSYKIGEVTQSGSYPGASPPVAYGQAPPAPAYPPSAAAAAAYPPQSTYPPPT
AYPTAAKADGSAAAAYPPQSAYPPPGKGNEPSTAYPPPAGYPPATGSSKPAKAGEPVTAY
PAAAGPSTAAPYGTAPPPQYGYGYPAQPPPPQAGYGYPPPPPQAGYGGGYGYPPQAGYGG
YQQQAVKPAKKNNFGMGLGAGLLGGALGGLLIGDAISDASAYDAGYDAGFDDGGGFDF

Transcript Sequence

Transcript ID

Os01t0934100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40973410:40974780:-1 gene:Os01g0934100 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os01t0934100-01)
Sequence

CAACGGGAGTCGTCGAATTCGGATACAAATCTGATCAGTTCGATTTCGATCGAATTTCAC
CCAAAGTCCACACAAACTTTCGATTCGATTTCTCCGATCTCGCAGCGGTGGCGGCCATGG
CGCAGAGGACGCTGGAGCTGACGCTGATCTCGGCCAAGGATCTCAAGGACGTGAACCTCC
TCTCCAAGATGGAGGTCTACGCCGTCGTCTCGCTCTCCGGCGACCGCCGCTCGCGGCAGC
GGATCGCCACCGACCGCGCCGGTGGCCGCAACCCGGCGTGGAACGCCGCCCCGCTCCGGT
TCACCGTCCCGGCCTCCGGCGCGGGTTCCCTCCACGTCCTCCTCCGCGCCGAGCGCGCCC
TCGGCGACCGCGACGTCGGCGAGGTCCACATCCCCCTCTCGGAGCTCCTCTCCGGCGCCC
CCGACGGCGCCGTCCCCGCCAAGTTCGTCTCCTACCAGGTCCGCAAGATCTCCTCCGGGA
AGCCACAGGGCGTCCTCAATTTCTCCTACAAGATCGGCGAGGTAACCCAATCCGGCTCCT
ACCCTGGTGCCTCTCCTCCGGTCGCGTACGGCCAAGCTCCACCGGCGCCAGCTTACCCGC
CCTCCGCCGCCGCCGCCGCGGCCTACCCGCCCCAATCCACCTACCCACCACCGACCGCCT
ACCCAACGGCAGCGAAGGCCGATGGGTCAGCCGCCGCGGCCTACCCACCCCAGTCCGCCT
ACCCACCACCGGGCAAGGGAAACGAGCCATCGACGGCTTACCCACCTCCCGCCGGCTACC
CGCCGGCGACCGGAAGTAGTAAGCCGGCGAAGGCGGGTGAGCCGGTGACGGCGTACCCAG
CCGCCGCGGGGCCGAGCACCGCCGCGCCATACGGCACGGCGCCACCGCCGCAGTACGGCT
ACGGGTACCCGGCCCAGCCGCCGCCGCCGCAAGCCGGCTACGGCTACCCACCCCCGCCGC
CGCAAGCCGGCTACGGCGGCGGCTACGGCTACCCGCCGCAGGCTGGGTACGGCGGCTACC
AGCAGCAGGCCGTGAAGCCGGCGAAGAAGAACAACTTCGGGATGGGACTCGGAGCCGGGC
TGCTCGGCGGCGCGCTCGGCGGCCTCCTCATCGGAGACGCCATCTCCGACGCGTCGGCGT
ATGACGCCGGCTACGACGCAGGGTTCGACGACGGCGGTGGCTTCGATTTCTAGATGACAC
AGATCGATGCAATGGGTGATCTTCGTATAATCTCGTATTGGTTTTTGTTTTGAATTTTGT
TTACTGCCAGGACCAAATTATGGATGATGTAAATAGGAGTTTAATTGACACCATATATAT
GTGGTGAAGCTATGTGATGGAGTACAAATATGAGTCAACTGTTGTTTTTTT