Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0934000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:40966739:40971020:-1 gene:Os01g0934000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18C description:WD40 repeat-like domain containing protein. (Os01t0934000-01);WD40 repeat-like domain containing protein. (Os01t0934000-02)
Sequence	ATGGCGACGCCGCCGCACGACGCCTCGCCGGCCCCACCAAACCCTAACCCCGTCTCCGAC GACCCCCCGCCGCCGCCGCCGGTGACGGAGACGAAGCCGGAGCCGGAGCCGCCTCTCCCC ACCACCTCGATCGACCCCACCCCGTCTGGCGACGAGGAGAGCGGCGATGACTCCTCGTCT TCTGTCTCATCCGCCTCGTCTACTTCGCCCACGGCCGCCGCGGCTGCTGCTGCTGCGGGA GGTGGAGGTGGAGGTGGAGGCGAGAGGGCGGCTCCCCACCCGGCGGCGAAGGATCTCCTC CATATCTCCTTCAACCAGGACTACGGCTGCTTCGCGGCGGGGACCAAGTCGGGCTTCCGC ATCTACAACTGCGATCCATTCCGCGAGATCTTCCGCCGGGACCTCGGGGCCGCGGGGGAC AACGGCGTCGGCGGTGGAGGAGGAGGAATCGGCGTCGTGGAGATGCTGTTCCGGTGTAAC ATACTGGCCCTCGTCGGCGGCGGAGACGCCCCTCACTACCCGCCTAACAAGGTGATGATC TGGGACGACCACCAGAGCCGGTGTATCGGGGAGCTCTCCTTCCGCTCCCCCGTGCGCGGT GTCCGCCTCCGCCGCGATCGCATCATCGTGGTGCTAGAGAACAAAATCTTCGTCTACAAT TTCGCGGACCTGAAGCTTGTTCACCAGATCGAGACGGCGCCTAACCCGAAGGGCCTCTGC GCGGTTTCGCAGCAGCCCGGATCGATTGTGCTGGTTTGCCCTGGTGCACAGAAAGGGCAG GTTAGAGTGGAGCACTATGGTGCCAGGAAGACCAAATTCATCAATGCGCATACTTCCCGT GTCGCGTGCTTTGCATTATCACAGGATGGGAGGCTCATTGCTACTGCCAGCACCAAGGGG ACACTTGTTAGAATCTACAATGCTGCCGAGGGCAATCTCCTGCAGGAAGTACGGAGAGGT GCTGATAGAGCAGAAATATATAGCTTGGCGTTCTCCAACAATTTGCAATATTTGGCTGTA TCAAGTGATAAAGGAACAATACATGTGTTCAATCTAAAGATAAATGTTGGATTAACCACG AATGATAAGCCCCTGCCTGCTCCAGATCCTGATGTTCCACATATCAGTCCATCTCTTTCT TTCATTAAGGGTGTACTACCAAAATATTTCCACTCGGAGTGGTCTGTAGCTCAGTTCAGA CTCCACGAGGGGGAGCAATATATTGTTGCATTTGGCCATGAGAAGAATACCGTGGCAGTT GTTGGCATGGATGGAAGCTTCTACCGATGCCAGTTCGACCCTGTAAACGGAGGAGAGATG CTGCAGCTGGAGTGCTACAATTTCCTAAAACCATCATCGGATCAACCACAGTAG

Peptide Sequence

PEP ID	Os01t0934000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:40966739:40971020:-1 gene:Os01g0934000 transcript:Os01t0934000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18C description:WD40 repeat-like domain containing protein. (Os01t0934000-01);WD40 repeat-like domain containing protein. (Os01t0934000-02)
Sequence	MATPPHDASPAPPNPNPVSDDPPPPPPVTETKPEPEPPLPTTSIDPTPSGDEESGDDSSS SVSSASSTSPTAAAAAAAAGGGGGGGGERAAPHPAAKDLLHISFNQDYGCFAAGTKSGFR IYNCDPFREIFRRDLGAAGDNGVGGGGGGIGVVEMLFRCNILALVGGGDAPHYPPNKVMI WDDHQSRCIGELSFRSPVRGVRLRRDRIIVVLENKIFVYNFADLKLVHQIETAPNPKGLC AVSQQPGSIVLVCPGAQKGQVRVEHYGARKTKFINAHTSRVACFALSQDGRLIATASTKG TLVRIYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGLTT NDKPLPAPDPDVPHISPSLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAV VGMDGSFYRCQFDPVNGGEMLQLECYNFLKPSSDQPQ

Transcript Sequence

Transcript ID	Os01t0934000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40966739:40971020:-1 gene:Os01g0934000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18C description:WD40 repeat-like domain containing protein. (Os01t0934000-01);WD40 repeat-like domain containing protein. (Os01t0934000-02)
Sequence	ACGCTTCCGATTCTGCCCATGGCGACGCCGCCGCACGACGCCTCGCCGGCCCCACCAAAC CCTAACCCCGTCTCCGACGACCCCCCGCCGCCGCCGCCGGTGACGGAGACGAAGCCGGAG CCGGAGCCGCCTCTCCCCACCACCTCGATCGACCCCACCCCGTCTGGCGACGAGGAGAGC GGCGATGACTCCTCGTCTTCTGTCTCATCCGCCTCGTCTACTTCGCCCACGGCCGCCGCG GCTGCTGCTGCTGCGGGAGGTGGAGGTGGAGGTGGAGGCGAGAGGGCGGCTCCCCACCCG GCGGCGAAGGATCTCCTCCATATCTCCTTCAACCAGGACTACGGCTGCTTCGCGGCGGGG ACCAAGTCGGGCTTCCGCATCTACAACTGCGATCCATTCCGCGAGATCTTCCGCCGGGAC CTCGGGGCCGCGGGGGACAACGGCGTCGGCGGTGGAGGAGGAGGAATCGGCGTCGTGGAG ATGCTGTTCCGGTGTAACATACTGGCCCTCGTCGGCGGCGGAGACGCCCCTCACTACCCG CCTAACAAGGTGATGATCTGGGACGACCACCAGAGCCGGTGTATCGGGGAGCTCTCCTTC CGCTCCCCCGTGCGCGGTGTCCGCCTCCGCCGCGATCGCATCATCGTGGTGCTAGAGAAC AAAATCTTCGTCTACAATTTCGCGGACCTGAAGCTTGTTCACCAGATCGAGACGGCGCCT AACCCGAAGGGCCTCTGCGCGGTTTCGCAGCAGCCCGGATCGATTGTGCTGGTTTGCCCT GGTGCACAGAAAGGGCAGGTTAGAGTGGAGCACTATGGTGCCAGGAAGACCAAATTCATC AATGCGCATACTTCCCGTGTCGCGTGCTTTGCATTATCACAGGATGGGAGGCTCATTGCT ACTGCCAGCACCAAGGGGACACTTGTTAGAATCTACAATGCTGCCGAGGGCAATCTCCTG CAGGAAGTACGGAGAGGTGCTGATAGAGCAGAAATATATAGCTTGGCGTTCTCCAACAAT TTGCAATATTTGGCTGTATCAAGTGATAAAGGAACAATACATGTGTTCAATCTAAAGATA AATGTTGGATTAACCACGAATGATAAGCCCCTGCCTGCTCCAGATCCTGATGTTCCACAT ATCAGTCCATCTCTTTCTTTCATTAAGGGTGTACTACCAAAATATTTCCACTCGGAGTGG TCTGTAGCTCAGTTCAGACTCCACGAGGGGGAGCAATATATTGTTGCATTTGGCCATGAG AAGAATACCGTGGCAGTTGTTGGCATGGATGGAAGCTTCTACCGATGCCAGTTCGACCCT GTAAACGGAGGAGAGATGCTGCAGCTGGAGTGCTACAATTTCCTAAAACCATCATCGGAT CAACCACAGTAGCAGCCCAAGCAGCGGATCTGTTTTTCCTCCCTTGTATCGGGGTTGTAC AGTATCTGTGTGCCCTCTCGATTATTGTTATTATTTGTAAATATATCTTAGTGGTGATTC TACAAGTATGCTCTGTTGAGGGTTAAAAGAACCCTTGTGCAGATGGACATAATAATATTA CTCCCACGTTAGC