Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0932500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40902494:40907438:-1 gene:Os01g0932500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 6 description:Potassium uptake protein, kup domain containing protein. (Os01t0932500-01)
Sequence	ATGGTGCCACCAGGCAATGGCAACGGCGCCGCCGCCGCCGCCGGCAACGACGTCATCCTC GAGCTCAGCACTCCCGGCGACGACTGGAGCCACGAGCTGCAGGGCGACGACGTCGAAGCG AACGGCGGCGGCAACGGCGACGCGCCTCCGCGCCGGACGTTCAGCTTCGGCCAGGCCTAC AAGACGCGGCACCGTCAGCCTCAGGTGTTCACGGTGTGGCAGACGCTGATGCTGGGGTAC CAGTCGCTGGGCATCGTGTACGGCGACCTCGGGACGTCGCCGCTGTACGTGTTCCCGTCC GTCGTCCTACCCGACGCCGACGCCACCGACTTCCTCGGCATCCTCAGCCTCATCATCTGG ACCCTCACCCTCATGAGCCTCGTCAAGTACGCCCTCATCGTCCTCAAAGCCGACGACCAT GGCGAAGGTGGTACATTTGCACTGTATTCGCTGCTGCGTCAGCACGTGAATTTCAAGGGG AACATACCGGTGCCGCTCACACGGTTGGAGTCCGATGTCCATCTCAAGTTCCACAGCAAG AGGAGAAGCCGGCCGTCACGGCTGCAGCTGTTCTTGGAGAACAGCCCAAAGGCGCAACTG GCGATCACCATCATCGTGCTGATCGGAACCTGCATGCTCATCGGCGATGGTGCCCTCACT CCAGCCATCTCAGTTCTTTCGGCGGTCCAGGGAATCCAGTCAAGATCGTCGCATATCAAG CAGAAGCACGTCGTGGTGCTGAGCGCGGTGATCCTGGTGCTCCTTTTCCTCGTCCAGCGA TTCGGCACCAGCAGGGTCAGCTTCACCTTCTCCCCAATCATGCTGCTGTGGTTTGCTTCG ATTGCAGGGATCGGTGTTTACAACATTGTGATGCACTACCCACCTGTTCTGAAAGCCGTC TCGCCTCACTACATATATTACTACTTCGCGAAGAACAAACGGGTTGGGTGGGAGCAACTC GGCGCGGTTATTCTCTGCATAACAGGTGCTGAAGCTATGTTTGCTGATATGGGACACTTC AACAAGTCATCAATTCAGGTGGCATTCTCAACGGCGGTGTTCCCATCCCTGATCCTGGCG TACTCAGGCCAGGCGGCATACCTGATCAAGAACCCGGGTGACCTGAGCACGGCGTTCTAC AGCAGCGTCCCGGCGCCGCTGTTCTGGCCGATGTTCGTCGTCTCCACCTTGGCCGCCATT GTTGCCAGCCAGTCGCTCATCTCTGCAAGCTACTCCATCATCAGGCAGTCCATCGCCCTG GGCTGCTTCCCAAGAACCACGGTGAAGCACACCTCCGACAAGTACGAGGGACAGGTTTAC TGCCCGGAGATCAACTACGTTTTGATGGTCGTGTGTGTTCTCATCACCGTTGGATTCCAG GGTGGGCCCGAGATCGGCCGCGCTTTCGGTGTTGCAGTGATCTGGGTGATGCTGCTGACG ACGACGCTGATGACGGTGGTGATGGTGGTGATCTGGGAGGTGAACGGCGCGCTCGCCGGC GGCTTCTTCGTCTTCTACCTCGCGATCGAGGGCACGTACATGACGTCGCTGATGACCAAG GTGCCGCAGGGCGGGTGGGTGCCGTTCGCCATCACCGTCGCCTTCCTCTCCGTCACGCTC TCCTGGACGTACGGCCGCAAGAAGAAGCGCGAGTACGAGGCGCGCCACGCCGTCGGCGAC GGCGAGTTCGCCGGCATCGTGTCCCGGAGCGCCCGCGTCCCCGGGATGTGCCTCTTCTGC ACCGACCTCATGGACGGCGTCCCGCCCATCGTCCGCCACTACGCCGCCAACACGGGCTCC CTCCGCGAGCTCCTCCTGTTCGTCACGTTCCGGACGCTGCCGGTGAGGACGGTGCTCGCC GGCGAGCGGTTCCTCGTGGCGAGGGAGGGGGCGCGCGCCGGCGTGTACCGGTGCATCGCC CAGTACGGGTACATGGACGAGCAGGACATGGTTGGGGACGACTTCGTCCGCGCTGCCGTC GCCGCGCTGGTCGAGGTGGCGGCGGCGGCGGCGGAGGCCGACTCCGGCGAGGAGGAGGCG GAGATGATCGGGCGGGCTCCGGCGAGCGGCGTCAGCTACGTGATCGGGAGGACGGTGCTG AGGATGCGGAGGGCGCGCAACTGGCCGAAGCGATTCGTCATCAACGAGCTCTACAGGTTC TTGCAGAAGAACTTTAGGTCCAACGTCTCCACGCTCAAGCTCGACCATGCCAAGACCTTG CAGGTCGGGATGATTTATGAGATCTGA

Peptide Sequence

PEP ID	Os01t0932500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40902494:40907438:-1 gene:Os01g0932500 transcript:Os01t0932500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 6 description:Potassium uptake protein, kup domain containing protein. (Os01t0932500-01)
Sequence	MVPPGNGNGAAAAAGNDVILELSTPGDDWSHELQGDDVEANGGGNGDAPPRRTFSFGQAY KTRHRQPQVFTVWQTLMLGYQSLGIVYGDLGTSPLYVFPSVVLPDADATDFLGILSLIIW TLTLMSLVKYALIVLKADDHGEGGTFALYSLLRQHVNFKGNIPVPLTRLESDVHLKFHSK RRSRPSRLQLFLENSPKAQLAITIIVLIGTCMLIGDGALTPAISVLSAVQGIQSRSSHIK QKHVVVLSAVILVLLFLVQRFGTSRVSFTFSPIMLLWFASIAGIGVYNIVMHYPPVLKAV SPHYIYYYFAKNKRVGWEQLGAVILCITGAEAMFADMGHFNKSSIQVAFSTAVFPSLILA YSGQAAYLIKNPGDLSTAFYSSVPAPLFWPMFVVSTLAAIVASQSLISASYSIIRQSIAL GCFPRTTVKHTSDKYEGQVYCPEINYVLMVVCVLITVGFQGGPEIGRAFGVAVIWVMLLT TTLMTVVMVVIWEVNGALAGGFFVFYLAIEGTYMTSLMTKVPQGGWVPFAITVAFLSVTL SWTYGRKKKREYEARHAVGDGEFAGIVSRSARVPGMCLFCTDLMDGVPPIVRHYAANTGS LRELLLFVTFRTLPVRTVLAGERFLVAREGARAGVYRCIAQYGYMDEQDMVGDDFVRAAV AALVEVAAAAAEADSGEEEAEMIGRAPASGVSYVIGRTVLRMRRARNWPKRFVINELYRF LQKNFRSNVSTLKLDHAKTLQVGMIYEI

Transcript Sequence

Transcript ID	Os01t0932500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40902494:40907438:-1 gene:Os01g0932500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 6 description:Potassium uptake protein, kup domain containing protein. (Os01t0932500-01)
Sequence	CTTCTCCTCCTCCTCCTCCTCCGCCTCTCGCCGGAGCGCGCCGCCGCCGCGTCGCGTTCT CGAAATCTTCGAGAGCTTGTACGGTAGCATCGATTCCATCATGGTGCCACCAGGCAATGG CAACGGCGCCGCCGCCGCCGCCGGCAACGACGTCATCCTCGAGCTCAGCACTCCCGGCGA CGACTGGAGCCACGAGCTGCAGGGCGACGACGTCGAAGCGAACGGCGGCGGCAACGGCGA CGCGCCTCCGCGCCGGACGTTCAGCTTCGGCCAGGCCTACAAGACGCGGCACCGTCAGCC TCAGGTGTTCACGGTGTGGCAGACGCTGATGCTGGGGTACCAGTCGCTGGGCATCGTGTA CGGCGACCTCGGGACGTCGCCGCTGTACGTGTTCCCGTCCGTCGTCCTACCCGACGCCGA CGCCACCGACTTCCTCGGCATCCTCAGCCTCATCATCTGGACCCTCACCCTCATGAGCCT CGTCAAGTACGCCCTCATCGTCCTCAAAGCCGACGACCATGGCGAAGGTGGTACATTTGC ACTGTATTCGCTGCTGCGTCAGCACGTGAATTTCAAGGGGAACATACCGGTGCCGCTCAC ACGGTTGGAGTCCGATGTCCATCTCAAGTTCCACAGCAAGAGGAGAAGCCGGCCGTCACG GCTGCAGCTGTTCTTGGAGAACAGCCCAAAGGCGCAACTGGCGATCACCATCATCGTGCT GATCGGAACCTGCATGCTCATCGGCGATGGTGCCCTCACTCCAGCCATCTCAGTTCTTTC GGCGGTCCAGGGAATCCAGTCAAGATCGTCGCATATCAAGCAGAAGCACGTCGTGGTGCT GAGCGCGGTGATCCTGGTGCTCCTTTTCCTCGTCCAGCGATTCGGCACCAGCAGGGTCAG CTTCACCTTCTCCCCAATCATGCTGCTGTGGTTTGCTTCGATTGCAGGGATCGGTGTTTA CAACATTGTGATGCACTACCCACCTGTTCTGAAAGCCGTCTCGCCTCACTACATATATTA CTACTTCGCGAAGAACAAACGGGTTGGGTGGGAGCAACTCGGCGCGGTTATTCTCTGCAT AACAGGTGCTGAAGCTATGTTTGCTGATATGGGACACTTCAACAAGTCATCAATTCAGGT GGCATTCTCAACGGCGGTGTTCCCATCCCTGATCCTGGCGTACTCAGGCCAGGCGGCATA CCTGATCAAGAACCCGGGTGACCTGAGCACGGCGTTCTACAGCAGCGTCCCGGCGCCGCT GTTCTGGCCGATGTTCGTCGTCTCCACCTTGGCCGCCATTGTTGCCAGCCAGTCGCTCAT CTCTGCAAGCTACTCCATCATCAGGCAGTCCATCGCCCTGGGCTGCTTCCCAAGAACCAC GGTGAAGCACACCTCCGACAAGTACGAGGGACAGGTTTACTGCCCGGAGATCAACTACGT TTTGATGGTCGTGTGTGTTCTCATCACCGTTGGATTCCAGGGTGGGCCCGAGATCGGCCG CGCTTTCGGTGTTGCAGTGATCTGGGTGATGCTGCTGACGACGACGCTGATGACGGTGGT GATGGTGGTGATCTGGGAGGTGAACGGCGCGCTCGCCGGCGGCTTCTTCGTCTTCTACCT CGCGATCGAGGGCACGTACATGACGTCGCTGATGACCAAGGTGCCGCAGGGCGGGTGGGT GCCGTTCGCCATCACCGTCGCCTTCCTCTCCGTCACGCTCTCCTGGACGTACGGCCGCAA GAAGAAGCGCGAGTACGAGGCGCGCCACGCCGTCGGCGACGGCGAGTTCGCCGGCATCGT GTCCCGGAGCGCCCGCGTCCCCGGGATGTGCCTCTTCTGCACCGACCTCATGGACGGCGT CCCGCCCATCGTCCGCCACTACGCCGCCAACACGGGCTCCCTCCGCGAGCTCCTCCTGTT CGTCACGTTCCGGACGCTGCCGGTGAGGACGGTGCTCGCCGGCGAGCGGTTCCTCGTGGC GAGGGAGGGGGCGCGCGCCGGCGTGTACCGGTGCATCGCCCAGTACGGGTACATGGACGA GCAGGACATGGTTGGGGACGACTTCGTCCGCGCTGCCGTCGCCGCGCTGGTCGAGGTGGC GGCGGCGGCGGCGGAGGCCGACTCCGGCGAGGAGGAGGCGGAGATGATCGGGCGGGCTCC GGCGAGCGGCGTCAGCTACGTGATCGGGAGGACGGTGCTGAGGATGCGGAGGGCGCGCAA CTGGCCGAAGCGATTCGTCATCAACGAGCTCTACAGGTTCTTGCAGAAGAACTTTAGGTC CAACGTCTCCACGCTCAAGCTCGACCATGCCAAGACCTTGCAGGTCGGGATGATTTATGA GATCTGAGACAAATAAATAAATAATGCAGCTGATGATGGATATTAATCCAACTAGCTATT CTAGTGTTTT