Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0931600-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:40875375:40876354:-1 gene:Os01g0931600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby, C-terminal domain containing protein. (Os01t0931600-00)
Sequence

ATGGCCAAGATCCAGCCCCTTCCGGCAGCCTCGCCGTCGGCGGAGTGGCACCATGGCGAC
GGCGGCGGCGGCGGTGTGCAGGGGAAGCAGGCGGTGTACACGGTGTGGATGAAGTCGCTG
GTGTTCAACGGCCATGGCTGCACGGTGTACGGCTCCGACGGCCGCGTCGCCTTCCGCGTC
GACAACTACGGCTGCAGGGGCAGCCGCGACGTCTTCTTCATGGACACCGCCGGCACCACC
CTCATCGGAATCCAAACCAAGAGCTTCGGGATGATGAAGAGATGGGAGGCGAGCCGGCAC
CACGGCGGCGAGAAGGAGACGACGACGGCGACGGTGACGACGCCGTGGTTCAGAGTGCAG
AGGGGCCGAGGTCCAGGAGGAGCCATGGCCACCGTGACGCTGCATGGCGGCGTCGGGATG
GCGTACAGGATCGACGGGTGCCCGAGCAAATCGGAGTACAGGATCAGCCGCGGCGGCGGC
GGCGGCGGCGGCGGCGACGGCGAGGTGGTGGCGGAGGTGGCGAGGAAGCAGACGGCGTCG
GGGGTGGTGCTCGGTGAGGACGTGCTGACGCTGACAGTGGGCCCGGGTGCGGATCACCTC
CTCGTCTTGGGATTGGTCGTCGTGTGTGGCCTCATCAGCCGTGCTATGTGA

Peptide Sequence

PEP ID

Os01t0931600-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:40875375:40876354:-1 gene:Os01g0931600 transcript:Os01t0931600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby, C-terminal domain containing protein. (Os01t0931600-00)
Sequence

MAKIQPLPAASPSAEWHHGDGGGGGVQGKQAVYTVWMKSLVFNGHGCTVYGSDGRVAFRV
DNYGCRGSRDVFFMDTAGTTLIGIQTKSFGMMKRWEASRHHGGEKETTTATVTTPWFRVQ
RGRGPGGAMATVTLHGGVGMAYRIDGCPSKSEYRISRGGGGGGGGDGEVVAEVARKQTAS
GVVLGEDVLTLTVGPGADHLLVLGLVVVCGLISRAM

Transcript Sequence

Transcript ID

Os01t0931600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40875375:40876354:-1 gene:Os01g0931600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubby, C-terminal domain containing protein. (Os01t0931600-00)
Sequence

TCCCTAACCATCTCATTGCTGCCGCAGCAGCAGCCGAGCAATCATCTTCTCGATCGATCC
CGGCAATGGCCAAGATCCAGCCCCTTCCGGCAGCCTCGCCGTCGGCGGAGTGGCACCATG
GCGACGGCGGCGGCGGCGGTGTGCAGGGGAAGCAGGCGGTGTACACGGTGTGGATGAAGT
CGCTGGTGTTCAACGGCCATGGCTGCACGGTGTACGGCTCCGACGGCCGCGTCGCCTTCC
GCGTCGACAACTACGGCTGCAGGGGCAGCCGCGACGTCTTCTTCATGGACACCGCCGGCA
CCACCCTCATCGGAATCCAAACCAAGAGCTTCGGGATGATGAAGAGATGGGAGGCGAGCC
GGCACCACGGCGGCGAGAAGGAGACGACGACGGCGACGGTGACGACGCCGTGGTTCAGAG
TGCAGAGGGGCCGAGGTCCAGGAGGAGCCATGGCCACCGTGACGCTGCATGGCGGCGTCG
GGATGGCGTACAGGATCGACGGGTGCCCGAGCAAATCGGAGTACAGGATCAGCCGCGGCG
GCGGCGGCGGCGGCGGCGGCGACGGCGAGGTGGTGGCGGAGGTGGCGAGGAAGCAGACGG
CGTCGGGGGTGGTGCTCGGTGAGGACGTGCTGACGCTGACAGTGGGCCCGGGTGCGGATC
ACCTCCTCGTCTTGGGATTGGTCGTCGTGTGTGGCCTCATCAGCCGTGCTATGTGA