Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0931100-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:40858575:40861675:-1 gene:Os01g0931100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0931100-01);Protein of unknown function DUF1624 domain containing protein. (Os01t0931100-02)
Sequence

ATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCC
GACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGAC
GAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGT
GGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATA
GGCCACGCGCCGTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTC
ATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGAGGATTCCAGACCGCGGTCGAGCTGTG
AGGAGAGTAGTGCTCAGGACACTGAAGCTGCTTTTTTGGGGAATTCTGTTGCAAGGCGGT
TACTCCCATGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGT
GGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACG
AAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTC
TCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATT
TATGTTCCTGACTGGGATTTCAGAGTGTCAGATGTTAAAAATCCAAACTTCGGCAAAATC
TTGACGGTGACATGTGGTACACGGGGAAAATTAAGTCCTCCTTGCAATGCTGTAGGTTAT
ATTGACCGTAAAGTTCTTGGTATCAATCATATGTACCACAGGCCAGCATGGAGGAGGCAC
AAGGACTGTACTGATGATTCCCCACATGAGGGACCTTTTAAAACTGATTCCCCGGCGTGG
TGTTATGCACCATTTGAACCTGAAGGGTTACTAAGCTCACTGTCCGCGGTGTTGAGTACG
ATCATCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGAGCCACACGGACAGACTA
AAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCA
CATGCAATTCCTTTGAACAAGCAACTGTACACCTTCAGTTATATCTGTGTTACTGCCGGT
GCGGCTGGAATCGTGTTCTGCATGTTCTACTTCCTGGTTGACATCCTGAATCTGCACTAC
CCATTCGCACCCCTGAAATGGACCGGCATGAACGCGATGCTGGTGTACGTGATGGCGGCG
GCAGGCATCTTCGAAGGGTTCTTGAACGGGTGGTACTACGAGGGCACCAACAACACACTG
GTTTACTGGGTGAGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCCGTGTGGGCATC
CTCCTCTACGTCCTCTTCGCGCAGATCTTGTTCTGGGCCCTTGTCGCCGGCCTCCTCCAC
CGTGCTCGCCTCTACTGGAAGCTCTAG

Peptide Sequence

PEP ID

Os01t0931100-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:40858575:40861675:-1 gene:Os01g0931100 transcript:Os01t0931100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0931100-01);Protein of unknown function DUF1624 domain containing protein. (Os01t0931100-02)
Sequence

MDGGGQGVARRHGAVAEEDPDRRRGDRSGKEGDDDGVDVDEKAPPPRRTSRRVASLDVFR
GLTVALMILVDGAGGEWPVIGHAPWNGCNLADFVMPFFLFIVGMAIPLSLKRIPDRGRAV
RRVVLRTLKLLFWGILLQGGYSHAPDDLSYGVDMKHVRWCGILQRIALAYLVVAVLEIVT
KNAKVQDQSSSGFSIFRMYFSQWIVACCILVIYLSLVYGIYVPDWDFRVSDVKNPNFGKI
LTVTCGTRGKLSPPCNAVGYIDRKVLGINHMYHRPAWRRHKDCTDDSPHEGPFKTDSPAW
CYAPFEPEGLLSSLSAVLSTIIGVHYGHVLVHMKSHTDRLKQWSIMGITLLILGLTLHFS
HAIPLNKQLYTFSYICVTAGAAGIVFCMFYFLVDILNLHYPFAPLKWTGMNAMLVYVMAA
AGIFEGFLNGWYYEGTNNTLVYWVRKHVFVKVWHSTRVGILLYVLFAQILFWALVAGLLH
RARLYWKL

Transcript Sequence

Transcript ID

Os01t0931100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40858575:40861675:-1 gene:Os01g0931100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0931100-01);Protein of unknown function DUF1624 domain containing protein. (Os01t0931100-02)
Sequence

GTTCGCTGGGGATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGG
AGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCG
TCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCG
ACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGT
GGCCGGTGATAGGCCACGCGCCGTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCT
TCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGAGGATTCCAGACCGCG
GTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCTTTTTTGGGGAATTCTGT
TGCAAGGCGGTTACTCCCATGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACG
TGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAG
AGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCA
GGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTG
TATATGGGATTTATGTTCCTGACTGGGATTTCAGAGTGTCAGATGTTAAAAATCCAAACT
TCGGCAAAATCTTGACGGTGACATGTGGTACACGGGGAAAATTAAGTCCTCCTTGCAATG
CTGTAGGTTATATTGACCGTAAAGTTCTTGGTATCAATCATATGTACCACAGGCCAGCAT
GGAGGAGGCACAAGGACTGTACTGATGATTCCCCACATGAGGGACCTTTTAAAACTGATT
CCCCGGCGTGGTGTTATGCACCATTTGAACCTGAAGGGTTACTAAGCTCACTGTCCGCGG
TGTTGAGTACGATCATCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGAGCCACA
CGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTC
TGCACTTTTCACATGCAATTCCTTTGAACAAGCAACTGTACACCTTCAGTTATATCTGTG
TTACTGCCGGTGCGGCTGGAATCGTGTTCTGCATGTTCTACTTCCTGGTTGACATCCTGA
ATCTGCACTACCCATTCGCACCCCTGAAATGGACCGGCATGAACGCGATGCTGGTGTACG
TGATGGCGGCGGCAGGCATCTTCGAAGGGTTCTTGAACGGGTGGTACTACGAGGGCACCA
ACAACACACTGGTTTACTGGGTGAGGAAGCATGTGTTCGTGAAGGTGTGGCATTCCACCC
GTGTGGGCATCCTCCTCTACGTCCTCTTCGCGCAGATCTTGTTCTGGGCCCTTGTCGCCG
GCCTCCTCCACCGTGCTCGCCTCTACTGGAAGCTCTAGCACTGCACTGGTACACTACACT
ACACTACAGCGTTTACACAGGGGCTGTTCGGATTGATGTCATTTTCAACCGAACTATTTT
TTTTAAAATTACCAAAAAGAAGTGTTGCATTTAGTTTGTTGCCAAACTTTGATAAATACA
TAAGAAATCCTACCAAAATTTTGAT