Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0930900-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:40849226:40850197:1 gene:Os01g0930900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Short chain alcohol dehydrogenase-like. (Os01t0930900-00)
Sequence

ATGGCAGCGTCGACGCCGGCGGCGAGCAGAGAGCGGCGGTGGAGCCTCGCCGGCAAGACG
GCGCTCGTCACCGGCGGCACCAAAGGCATCGGGCGCGCGATCGTGGAGGAGCTCGCCGGG
TTCGGGGTGAGGGTGCACACGTGTTCACGCCACGACGCCGACCTGCAGGACTGCCTCCGC
CGGTGGAACGCCGCCGACGGTGGCGGCCTCGGCGGCGGCGCGGCGGCGCCCGTCACGGCG
TCCGTCTGCGACGTGTCGGTGCGCGGCGACAGGGAGGCGCTGGTGGCGGCGGCGCGCGCC
GCGCTCGGCGGGAGGCTGGACATACTCGTCAACAACGTCGGCCAGACGCTGTTCGGCGCG
GCCGCGGCGTGCGCGGCGGAGGACTACGCGCGCATCATGGCGACCAACCTCGAGTCCTGC
TTCCACCTCGCCCAGCTCGCGCACCCTCTCCTCCTCGGCGCCGGCGGCGCCGCCGCGAGC
GTGGTGAACATCTCCTCCGTCGCAGGGTTCATCGCCTACCCGGCGCTGTCCGTCTACTCG
GCGACGAAGGGCGCCATGAACCAGCTCACGCGGAGCCTCGCCGCCGAGTGGGCGCGCGAC
GGCATCCGCGTCAACTGCGTCGCGCCGGGCGGCGTCCGGACCGATATCGCCGGCAGCAGC
GGCGTGGCGCTGGAGCCGGGGGCGGCGCGGGCGATGGAGGAGAGGGAGGCGGCGCGGGTC
GTCATGGGCCGCATCGGCGAGCCCGAGGAGGTGGCGTCGCTCGTCGCGTTCCTCTGCATG
CCGGCGGCGCCGTACATCACCGGGCAGGTCATCTGCGTCGACGGTGGCCGCACCATCACC
GCCTAG

Peptide Sequence

PEP ID

Os01t0930900-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:40849226:40850197:1 gene:Os01g0930900 transcript:Os01t0930900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Short chain alcohol dehydrogenase-like. (Os01t0930900-00)
Sequence

MAASTPAASRERRWSLAGKTALVTGGTKGIGRAIVEELAGFGVRVHTCSRHDADLQDCLR
RWNAADGGGLGGGAAAPVTASVCDVSVRGDREALVAAARAALGGRLDILVNNVGQTLFGA
AAACAAEDYARIMATNLESCFHLAQLAHPLLLGAGGAAASVVNISSVAGFIAYPALSVYS
ATKGAMNQLTRSLAAEWARDGIRVNCVAPGGVRTDIAGSSGVALEPGAARAMEEREAARV
VMGRIGEPEEVASLVAFLCMPAAPYITGQVICVDGGRTITA

Transcript Sequence

Transcript ID

Os01t0930900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40849226:40850197:1 gene:Os01g0930900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Short chain alcohol dehydrogenase-like. (Os01t0930900-00)
Sequence

ATGGCAGCGTCGACGCCGGCGGCGAGCAGAGAGCGGCGGTGGAGCCTCGCCGGCAAGACG
GCGCTCGTCACCGGCGGCACCAAAGGCATCGGGCGCGCGATCGTGGAGGAGCTCGCCGGG
TTCGGGGTGAGGGTGCACACGTGTTCACGCCACGACGCCGACCTGCAGGACTGCCTCCGC
CGGTGGAACGCCGCCGACGGTGGCGGCCTCGGCGGCGGCGCGGCGGCGCCCGTCACGGCG
TCCGTCTGCGACGTGTCGGTGCGCGGCGACAGGGAGGCGCTGGTGGCGGCGGCGCGCGCC
GCGCTCGGCGGGAGGCTGGACATACTCGTCAACAACGTCGGCCAGACGCTGTTCGGCGCG
GCCGCGGCGTGCGCGGCGGAGGACTACGCGCGCATCATGGCGACCAACCTCGAGTCCTGC
TTCCACCTCGCCCAGCTCGCGCACCCTCTCCTCCTCGGCGCCGGCGGCGCCGCCGCGAGC
GTGGTGAACATCTCCTCCGTCGCAGGGTTCATCGCCTACCCGGCGCTGTCCGTCTACTCG
GCGACGAAGGGCGCCATGAACCAGCTCACGCGGAGCCTCGCCGCCGAGTGGGCGCGCGAC
GGCATCCGCGTCAACTGCGTCGCGCCGGGCGGCGTCCGGACCGATATCGCCGGCAGCAGC
GGCGTGGCGCTGGAGCCGGGGGCGGCGCGGGCGATGGAGGAGAGGGAGGCGGCGCGGGTC
GTCATGGGCCGCATCGGCGAGCCCGAGGAGGTGGCGTCGCTCGTCGCGTTCCTCTGCATG
CCGGCGGCGCCGTACATCACCGGGCAGGTCATCTGCGTCGACGGTGGCCGCACCATCACC
GCCTAG