Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0930200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:40812546:40814128:1 gene:Os01g0930200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0930200-01)
Sequence

ATGCCGACCGGGGCGATGAAGAGGCTGTTCGTTGAGTCGTCGTCGTCGGCGGCGGCGTCG
AACTCCGGCAGGGAGGCGGCGGTGCTGTGCGCGCCGCGGCCGAGGAGGGTCCAGGTGCAC
CCTTGCAGCGCTGACCTCATCCTCGGCCCTCCTCCTTTCCTCCTCTCCTCCAACAACACC
AACAAGCAAAGGGAAGGGAAGAGTAAGGAGGAGGAGGAGGAGGGGAGGTGGGAGATGTTC
GGAGGGTCGCCGCCGGCGAGGGCGGACAACCCGCTCGTCCACGACCCGCACTTCCTGCTC
AACCAGCGCCCCCACGCCGCCGCCGCCGCCGCCGCGCCGGAGCTCTCGATTTTTGACCAC
CGGAGCACCCACCACGGCCACCACCCCGCGTACAGCAGCAGCAGCAGTTTTGCCCCGTCG
TTCGCGCCGGCGGTGAGGATCCAGGGGTTCGACGTCGCCGCCTGCCGGAGCTCGCACGGC
AGCGGCGGCGGCGGCCGCGTGCTGTCCGCCCGCGCCTGA

Peptide Sequence

PEP ID

Os01t0930200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:40812546:40814128:1 gene:Os01g0930200 transcript:Os01t0930200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0930200-01)
Sequence

MPTGAMKRLFVESSSSAAASNSGREAAVLCAPRPRRVQVHPCSADLILGPPPFLLSSNNT
NKQREGKSKEEEEEGRWEMFGGSPPARADNPLVHDPHFLLNQRPHAAAAAAAPELSIFDH
RSTHHGHHPAYSSSSSFAPSFAPAVRIQGFDVAACRSSHGSGGGGRVLSARA

Transcript Sequence

Transcript ID

Os01t0930200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40812546:40814128:1 gene:Os01g0930200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0930200-01)
Sequence

TTTGCGTTCTTGGATCCAAACCAACCAAAAGCCAAGCCATATAGAGAGAGAGAAGAGGCA
AAGGCCAAATCTTGAGCTTCTTCTTATTCCTCCTCCTCCATCTCCTCTCCTCCGATGCTT
CACCTCGTCGCCCTAAATTTATCACCCAGAGGCGACTTGGCAAGAGGAGGCCGCGGAGGA
GAGAGAGATTGATAGGTAGACAGATATAGGTAGTGATCGATACTAGCTTCAAAAGGAGGG
ATTTTTTGTTGTTCTTGGATCTTTAGAGAGAGAGAGAGAGAGAGAGAGGAGATGCCGACC
GGGGCGATGAAGAGGCTGTTCGTTGAGTCGTCGTCGTCGGCGGCGGCGTCGAACTCCGGC
AGGGAGGCGGCGGTGCTGTGCGCGCCGCGGCCGAGGAGGGTCCAGGTGCACCCTTGCAGC
GCTGACCTCATCCTCGGCCCTCCTCCTTTCCTCCTCTCCTCCAACAACACCAACAAGCAA
AGGGAAGGGAAGAGTAAGGAGGAGGAGGAGGAGGGGAGGTGGGAGATGTTCGGAGGGTCG
CCGCCGGCGAGGGCGGACAACCCGCTCGTCCACGACCCGCACTTCCTGCTCAACCAGCGC
CCCCACGCCGCCGCCGCCGCCGCCGCGCCGGAGCTCTCGATTTTTGACCACCGGAGCACC
CACCACGGCCACCACCCCGCGTACAGCAGCAGCAGCAGTTTTGCCCCGTCGTTCGCGCCG
GCGGTGAGGATCCAGGGGTTCGACGTCGCCGCCTGCCGGAGCTCGCACGGCAGCGGCGGC
GGCGGCCGCGTGCTGTCCGCCCGCGCCTGATCCGCCGGCGGCGGCTCGCCGACGAACCGC
CTGTCCCAAAGGGAACGTAAAATCCTCAATCTTGTACAGTTTTCGCCGGCCGCGTTCGCA
GTCACCATGGTGAAGTATATAAAGTAATTTTTAGTACGGTTTTATTAACAGCAGATAGTA
GGGAGGTTAATTAAGGAAAAAAAGGAGTTTAGAAACGATCGCCCGATGCACAGGAGGATG
ATCAAACCAACCACGGAGGAGGAGAGGATTTTTAATCAATTATTGTTCTTCTTTTTTTTT
TACTGAATTGGTTTCTGGATCTCAAGTCTTGTGTTCGTTGAGATGGAAGAGTCAGGTCAG
GTGAGGTGTTTTGTAGATATATGTTGTTCTTGTCCATGGTGAGAGAGATAAAGGGCTTGC
TTGAGCCATCACCATACTACTAGTGCTACTCTACTACTGCCATGTAAAAAGAAAAATCCA
TGGCTGTACTTGTAAAGAAGATGTTTGTGTACATAAACATGATGATGATGATGATGATAT
GGAGCTGTACCATGTAATCGGTTCACTCAAAATCGATCTCCTGTTTCTTGCC