Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0928800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40774498:40778604:-1 gene:Os01g0928800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LCB2A1 description:Similar to Serine palmitoyltransferase. (Os01t0928800-01)
Sequence	ATGGTGAGGCTGCCCTACGTGACCGCGCTGACCACGCTCTTCAGCTACGGCCTCCTCTTC GCCTTCGGCCAGCTCCGCGACTTCTTCCGCAGGATCCTCGACGCTGGCAAATCCAGCAAT CTCAAGGGCTACGCGCCGATTTGCCTTGGGCTGGAGGATTTCTACACGCGCCGCCTCTAT CTCCGCATCCAGGACTGTTTTGGCCGGCCAATTGCTAGCGCACCAGATGCTTGGTTTGAC GTGGTTGAGCGTTACTCAAATGACAGTAACAAGACACTGCATCGTACCACAAAAACATCT AAGTGCCTTAACTTAGGTTCCTACAACTACCTTGGCTTTGCCGCGGCAGATGAATACTGC ACCCCTCGTGTTATTGAGTCACTGAAGAAATACTCTGCTAGTACTTGCAGTGTCCGAGTC GATGGGGGCAACACTAAGCTGCATGTGGAACTTGAAGAGCTGGTTGCAAGATTTGTTGGC AAGCCTGCAGCTATTCTTTTTGGCATGGGTTATGTGACGAACTCTGCAATCATTCCTGCC TTGGTTGGGAAGGGAGGACTCATAATTAGTGACTCATTGAACCATAACTCTATAGTGAAT GGGGCTAGGGGTTCAGGAGCTACTGTTCGGGTTTTTCAACATAACAATCCTGCACACTTG GAAGAGGTATTGAGAGAGCAGATTGCAGGAGGCCAGCCTCGTACACACAGGCCGTGGAAG AAGATTATTGTGATTGTTGAGGGAATATATAGCATGGAGGGGGAGCTATGCAAACTCCCT GAGGTTATAGCTGTCTGCAAGAAATATAAGGCTTACACATATTTAGACGAGGCACACAGT ATTGGAGCTGTTGGTAAAACCGGGAGAGGTGTTTGTGAGCTACTAGGTGTGGATCCAGCT GATGTCGATATTATGATGGGAACATTTACTAAATCATTTGGATCATGCGGAGGTTACATT GCAGCATCAAAAGAGATTATTGATCATCTGAAGCACATATGCCCTGCCCATATCTATGCA ACATCCATGTCACCTCCAGCTGTTCAGCAGGTCATTTCTGCAATAAAAGTTATCCTTGGT GAAGATGGATCTAACAGAGGGGCCAAGAAGCTTGCTCAGATTCGAGAGAACAGCAATTTC TTCCGTTCAGAGCTTCAGAAAATGGGTTTTGAAGTTCTTGGAGACAATGACTCGCCGGTC ATGCCTATCATGCTTTACAATCCTGCTAAAATACCTGCGTTCTCAAGAGAGTGCCTGAGG CAACACGTTGCTGTTGTTACTGTTGCATTTCCTGCTACACCACTACTGCTTGCCAGAGCT AGGATATGTATCTCAGCTTCCCACTCAAGGGAAGATCTTATTAAAGGATTGGAGGTTATC AGCAAAGTTGGTGACCTCGTGGGAATCAAATACTTCCCAGTGGAACATGAAAAGACTGCA TCTGTTGAGAAACTGAAGAAGCTTCAATGA

Peptide Sequence

PEP ID	Os01t0928800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40774498:40778604:-1 gene:Os01g0928800 transcript:Os01t0928800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LCB2A1 description:Similar to Serine palmitoyltransferase. (Os01t0928800-01)
Sequence	MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLY LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYC TPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPA LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWK KIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPA DVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILG EDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR QHVAVVTVAFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTA SVEKLKKLQ

Transcript Sequence

Transcript ID	Os01t0928800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40774498:40778604:-1 gene:Os01g0928800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LCB2A1 description:Similar to Serine palmitoyltransferase. (Os01t0928800-01)
Sequence	ATCTGTTGCCTAAGACTGTGACTCACTAGCTTGACACGAAGAAAATTCGAGGAAAAGAAC ACATTGAGCGATGCGATGCGATGTGATGGCGATGGCGTCATCCGAGCGCCGGTGACCGGC GACGGGGACTCCTCCTCCGCCGCCGCCGCCGCCATCATCGTCGTCGTCGTTGCCGTCGAT AATCCTGACCCAGATCCGGCTAATTATATTATTACCCGATTCCAATCAGCTGCTAATCGA GTGGTAATCTCCATCACATCACATCACAGCCTCGTTCGTTCGTCGCTGACGGCACATTAT TATATCCTAGTATTATATTATTAATTAATCGCCGTCACCTCGTCGCCATTGACGACCTCT TCCTCTTCTTCCTCCTCCTCCTCTTCCACTCCCCCACCTCACCTCGCCGCTCGCCGTGGC GGCGGCTATAAATACCACTCCACCTGCTGCCGTCGCCGCCGCCATCGCCTCCCATCCTCC CGCCGCCGCCGCCTGCATCGACGACGATGGTGAGGCTGCCCTACGTGACCGCGCTGACCA CGCTCTTCAGCTACGGCCTCCTCTTCGCCTTCGGCCAGCTCCGCGACTTCTTCCGCAGGA TCCTCGACGCTGGCAAATCCAGCAATCTCAAGGGCTACGCGCCGATTTGCCTTGGGCTGG AGGATTTCTACACGCGCCGCCTCTATCTCCGCATCCAGGACTGTTTTGGCCGGCCAATTG CTAGCGCACCAGATGCTTGGTTTGACGTGGTTGAGCGTTACTCAAATGACAGTAACAAGA CACTGCATCGTACCACAAAAACATCTAAGTGCCTTAACTTAGGTTCCTACAACTACCTTG GCTTTGCCGCGGCAGATGAATACTGCACCCCTCGTGTTATTGAGTCACTGAAGAAATACT CTGCTAGTACTTGCAGTGTCCGAGTCGATGGGGGCAACACTAAGCTGCATGTGGAACTTG AAGAGCTGGTTGCAAGATTTGTTGGCAAGCCTGCAGCTATTCTTTTTGGCATGGGTTATG TGACGAACTCTGCAATCATTCCTGCCTTGGTTGGGAAGGGAGGACTCATAATTAGTGACT CATTGAACCATAACTCTATAGTGAATGGGGCTAGGGGTTCAGGAGCTACTGTTCGGGTTT TTCAACATAACAATCCTGCACACTTGGAAGAGGTATTGAGAGAGCAGATTGCAGGAGGCC AGCCTCGTACACACAGGCCGTGGAAGAAGATTATTGTGATTGTTGAGGGAATATATAGCA TGGAGGGGGAGCTATGCAAACTCCCTGAGGTTATAGCTGTCTGCAAGAAATATAAGGCTT ACACATATTTAGACGAGGCACACAGTATTGGAGCTGTTGGTAAAACCGGGAGAGGTGTTT GTGAGCTACTAGGTGTGGATCCAGCTGATGTCGATATTATGATGGGAACATTTACTAAAT CATTTGGATCATGCGGAGGTTACATTGCAGCATCAAAAGAGATTATTGATCATCTGAAGC ACATATGCCCTGCCCATATCTATGCAACATCCATGTCACCTCCAGCTGTTCAGCAGGTCA TTTCTGCAATAAAAGTTATCCTTGGTGAAGATGGATCTAACAGAGGGGCCAAGAAGCTTG CTCAGATTCGAGAGAACAGCAATTTCTTCCGTTCAGAGCTTCAGAAAATGGGTTTTGAAG TTCTTGGAGACAATGACTCGCCGGTCATGCCTATCATGCTTTACAATCCTGCTAAAATAC CTGCGTTCTCAAGAGAGTGCCTGAGGCAACACGTTGCTGTTGTTACTGTTGCATTTCCTG CTACACCACTACTGCTTGCCAGAGCTAGGATATGTATCTCAGCTTCCCACTCAAGGGAAG ATCTTATTAAAGGATTGGAGGTTATCAGCAAAGTTGGTGACCTCGTGGGAATCAAATACT TCCCAGTGGAACATGAAAAGACTGCATCTGTTGAGAAACTGAAGAAGCTTCAATGAACAC CTACAACCAGAAGAAATATACTGGGTGATCTAGGCAGTGTGCCATGCCTCGGTTCGGCTC ATGTGCTTCGGACCCTTTTGATTTTCCTTTGTTTCTGAAGTGGCTTAGATCTGTACAGCT TGTATTATCATCCATCATAGTCCAAAACACAACACAATGATAGACACTGTTTTGTCGAGT TCAGAGGAAGCAAAAGTTTCGCTGTTACAGCTCTGAATCTTGCGAGTAAAGTGTCTGAAA TCATGTAGAGACTCTTCCTCTTTTGATTTTAGCTTCCTTTGTAGATGCAACGTCAGTTGC ATCGATTGTGTGTGAAGTAAGCTTCACTCATAGTGTGAGGTCTGGTTGCTGTGATCAAGT GATTAAGCGAAAAAATGTTGTTAAATCTCTG