Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0928700-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:40767170:40771614:-1 gene:Os01g0928700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LCB2A2 description:Similar to Serine palmitoyltransferase. (Os01t0928700-00)
Sequence	ATGGTGAGGGTGCCGTTCGTGACCGCGGTCACCACGGTGTTCAGCTACGGCGTCATCTTC GGCTTCGGCCACCTCCGCGATTGGTTCCGCGCCCTCCTCCGCTCCCTCTTCTCCGGCCAC TCGCCGGCGGCAGCCGGTACCAACCTCAAGGGTTACGCGCCAATTTGCGGAGGACAGGAG GATTTCTATTACCGACGATTCGTTCGTCGCGTTCAGGACTGCTTTTGGCGACCAATAGCC AGCAAGCCGGACGCATGGTTCGATGTGGTTGAGCGCTACTCAAATGACAGCAACAAGACA CTCCACCGTACCACAAAAACATCCAGGTGCCTTAACTTAGGTTCCTACAATTACCTTGGC TTTGCTGCGGCAGATGAATACTGCACTCCTCGTGTTATTGAGTCACTAAAGAAATACTCT GCTAGTACTTGCAGTGTCCGAGTCGATGGAGGCAACACTAAGCTGCATGTGGAACTTGAA GAACTGGTTGCAAGATTTGTTGGCAAGCCTGCAGCTATTCTCTTCGGCATGGGTTATGTG ACGAACTCTGCGATCATTCCTGCCTTGATTGGGAAGGGAGGCCTCATAATCAGTGATTCA CTGAACCATAATTCTATAGTGAATGGAGCAAGGGGTTCAGGAGCTAGTGTTCAAGTTTTC CAACATAACAATCCTGCACACTTGGAAGAGGTATTGAGAGAGCAGATTGCAGGAGGCCAG CCTCGCACACACCGGCGATGGAAGAAGATTATTGTGATTGTTGAGGGAATATATAGCATG GAAGGGGAGCTATGCAAACTCCCTGAGATTGTAGCTGTCTGCAAGAAATATAAGGCTTAC ACATATTTAGATGAGGCACACAGCATTGGGGCTGTTGGTAAGACAGGGAGAGGTGTTTGT GAATTACTTGGAGTGGACCCAGCGGATGTTGATATTATGATGGGAACATTTACTAAATCA TTTGGATCTTGTGGAGGTTACATTGCAGCATCAAAAGAGATTATTGATCATCTGAAGCAC ATATGCCCTGCCCATATCTATGCAACATCCATGTCACCTCCCGCTGTCCAGCAGGTCATC TCTGCAATAGAAGTAATCCTTGGTGAAGATGGATCTGACAGAGGAGCCAAGAAGCTTGCT CAGATTCGGGAGAACAGCAATTTCTTCCGTTCAGAACTTGAGAAAATGGGTTTTGAAGTT CTTGGAGACAACGACTCGCCTGTCATGCCTATCATGCTTTACAATCCTGCTAAAATGCCT GCATTCTCAAGAGAGTGCCTGAGGCAAAAGGTTGCCATTGTTACTGTTTCATTTCCGGCA ACGCCACTGCTACTTGCCAGAGCTAGGATATGCATATCAGCTTCCCACTCTAGGGAAGAT CTTATTAAAGGATTGGAGGTTATCAGCAAAGTTGGTGACCTCGTGGGAATCAAATATTTA CCAGTGGAGCATGAAAAGACTACATCTGCTGAGAAACTGAAGAAGATTCAGTGA

Peptide Sequence

PEP ID	Os01t0928700-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:40767170:40771614:-1 gene:Os01g0928700 transcript:Os01t0928700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LCB2A2 description:Similar to Serine palmitoyltransferase. (Os01t0928700-00)
Sequence	MVRVPFVTAVTTVFSYGVIFGFGHLRDWFRALLRSLFSGHSPAAAGTNLKGYAPICGGQE DFYYRRFVRRVQDCFWRPIASKPDAWFDVVERYSNDSNKTLHRTTKTSRCLNLGSYNYLG FAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYV TNSAIIPALIGKGGLIISDSLNHNSIVNGARGSGASVQVFQHNNPAHLEEVLREQIAGGQ PRTHRRWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYTYLDEAHSIGAVGKTGRGVC ELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVI SAIEVILGEDGSDRGAKKLAQIRENSNFFRSELEKMGFEVLGDNDSPVMPIMLYNPAKMP AFSRECLRQKVAIVTVSFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYL PVEHEKTTSAEKLKKIQ

Transcript Sequence

Transcript ID	Os01t0928700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40767170:40771614:-1 gene:Os01g0928700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LCB2A2 description:Similar to Serine palmitoyltransferase. (Os01t0928700-00)
Sequence	ATGGTGAGGGTGCCGTTCGTGACCGCGGTCACCACGGTGTTCAGCTACGGCGTCATCTTC GGCTTCGGCCACCTCCGCGATTGGTTCCGCGCCCTCCTCCGCTCCCTCTTCTCCGGCCAC TCGCCGGCGGCAGCCGGTACCAACCTCAAGGGTTACGCGCCAATTTGCGGAGGACAGGAG GATTTCTATTACCGACGATTCGTTCGTCGCGTTCAGGACTGCTTTTGGCGACCAATAGCC AGCAAGCCGGACGCATGGTTCGATGTGGTTGAGCGCTACTCAAATGACAGCAACAAGACA CTCCACCGTACCACAAAAACATCCAGGTGCCTTAACTTAGGTTCCTACAATTACCTTGGC TTTGCTGCGGCAGATGAATACTGCACTCCTCGTGTTATTGAGTCACTAAAGAAATACTCT GCTAGTACTTGCAGTGTCCGAGTCGATGGAGGCAACACTAAGCTGCATGTGGAACTTGAA GAACTGGTTGCAAGATTTGTTGGCAAGCCTGCAGCTATTCTCTTCGGCATGGGTTATGTG ACGAACTCTGCGATCATTCCTGCCTTGATTGGGAAGGGAGGCCTCATAATCAGTGATTCA CTGAACCATAATTCTATAGTGAATGGAGCAAGGGGTTCAGGAGCTAGTGTTCAAGTTTTC CAACATAACAATCCTGCACACTTGGAAGAGGTATTGAGAGAGCAGATTGCAGGAGGCCAG CCTCGCACACACCGGCGATGGAAGAAGATTATTGTGATTGTTGAGGGAATATATAGCATG GAAGGGGAGCTATGCAAACTCCCTGAGATTGTAGCTGTCTGCAAGAAATATAAGGCTTAC ACATATTTAGATGAGGCACACAGCATTGGGGCTGTTGGTAAGACAGGGAGAGGTGTTTGT GAATTACTTGGAGTGGACCCAGCGGATGTTGATATTATGATGGGAACATTTACTAAATCA TTTGGATCTTGTGGAGGTTACATTGCAGCATCAAAAGAGATTATTGATCATCTGAAGCAC ATATGCCCTGCCCATATCTATGCAACATCCATGTCACCTCCCGCTGTCCAGCAGGTCATC TCTGCAATAGAAGTAATCCTTGGTGAAGATGGATCTGACAGAGGAGCCAAGAAGCTTGCT CAGATTCGGGAGAACAGCAATTTCTTCCGTTCAGAACTTGAGAAAATGGGTTTTGAAGTT CTTGGAGACAACGACTCGCCTGTCATGCCTATCATGCTTTACAATCCTGCTAAAATGCCT GCATTCTCAAGAGAGTGCCTGAGGCAAAAGGTTGCCATTGTTACTGTTTCATTTCCGGCA ACGCCACTGCTACTTGCCAGAGCTAGGATATGCATATCAGCTTCCCACTCTAGGGAAGAT CTTATTAAAGGATTGGAGGTTATCAGCAAAGTTGGTGACCTCGTGGGAATCAAATATTTA CCAGTGGAGCATGAAAAGACTACATCTGCTGAGAAACTGAAGAAGATTCAGTGA