Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0928600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:40759332:40763911:-1 gene:Os01g0928600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine palmitoyltransferase. (Os01t0928600-01)
Sequence	ATGGTGATCAAGGTGCCGTACGTGACGGCGGCGACGACGCTGTTCAGCTTCGGCCTCATC TTCGGCTTCGGCCACCTCCGCGACTCCTTCCGCGCCCTTCTCCGCCTCCTCTTCTCCTCC GCCGCCGCCGCCGACTCGCCGGCCGGCTGCAACTCCAAAGGTTACGCGCCGATTTGCGTT GGGAAGGAGGATTTCTACATCCGCCGCTTCTTCCGCCGCGTCCAGGACTGTTTCGGGCGA CCGATAGCCAGCAAGCCTGATGCGTGGTTCGATGTGGTTGAGCGCTACTCGACTGACAGC AACAAGACACTGCACTGCACCACGAAAACATCCAAGTGCCTGAACCTGGCATCCTTCAAC TACCTAGGTTTCGCTGCTGCTGATGAGTACTGCACACCTCGTGTCATCGAGTCTCTGAAG AAATACTCTGCTAGTACCTGCAGTTCCCGAGTCGATGGAGGCAACACTCAGCTGCACATA GAACTCGAAGAGCTGGTTGCAAGATTCGTCAGGAAGCCTTCGGCTATTCTGCTTGCCATG GGTTATGCCACCAACTCTGCCATCATTCCTGCCTTGATTGGGAAGGGTGGACTGATAATC AGTGATTCACTGAACCATAACTCTATAGTCAGTGGAGCTAGAGCTTCAGGAGCTACGATT CGGGTGTTCGAACACAACAATCCTGCTCACCTGGAAAAACTACTGAGAGAGCAGATTTCA GGTGGACAGCCTAGAACACACAGGGCATGGAAGAAGATCCTGGTGATTGTTGAGGGGATA TATAGCATGGAAGGGGAGCTATGCAAACTCCCTGAGATCATATCTGTCTGCAAGAAGTAC AAGGTTTACACATACATGGACGAGGCACACAGTATTGGAGCTGTTGGGAAAACAGGAAGA GGTGTGTGTGAGCTACTAGGAGTGGATCCGGCTGATGTTGACATCATGATGGGCACACTC TCAAAGTCATTTGGATCGAGTGGAGGTTACATTGCAGCATCAAAAGAGATTATTCAGCAT CTCAAGCTTACATGTCCTTCACATATCTATGGCACATCCATGTCACCTCCTGCAGTCCAG CAGGTCATCTCTGCAATGAAGGTTATTCTTGGGGAGGATGGAACTGACAGAGGGGCCAAG AAGATTGCTCAGATTAGAGATAACAGCAATTTCTTCCGTTCAGAGCTTCAGAAAATGGGC TTTGAGGTTCTTGGAGATAATGACTCACCTGTCATGCCTTTCATGGTCTACAATCCTGCT AAAATGCCTGCATTCTCAAGAGAGTGCCTGAAGCAAAATGTTGCTGTTGTTCCGGTTGGA TTTCCTGCTACACCACTACTTCTTGGCAGAATTAGGATATGCATTTCTGCTTCTCACTCA AGGGAAGATCTTATCAAAGGATTGGAGGTTATCAGCAACGTTGGTGATCTTGTTGGAATC AAGTACTTACCAGTTGAGCAAGAGGAGACTACATCTGTTGAGAAACCAAAGAAGCTTTAG

Peptide Sequence

PEP ID	Os01t0928600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:40759332:40763911:-1 gene:Os01g0928600 transcript:Os01t0928600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine palmitoyltransferase. (Os01t0928600-01)
Sequence	MVIKVPYVTAATTLFSFGLIFGFGHLRDSFRALLRLLFSSAAAADSPAGCNSKGYAPICV GKEDFYIRRFFRRVQDCFGRPIASKPDAWFDVVERYSTDSNKTLHCTTKTSKCLNLASFN YLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGNTQLHIELEELVARFVRKPSAILLAM GYATNSAIIPALIGKGGLIISDSLNHNSIVSGARASGATIRVFEHNNPAHLEKLLREQIS GGQPRTHRAWKKILVIVEGIYSMEGELCKLPEIISVCKKYKVYTYMDEAHSIGAVGKTGR GVCELLGVDPADVDIMMGTLSKSFGSSGGYIAASKEIIQHLKLTCPSHIYGTSMSPPAVQ QVISAMKVILGEDGTDRGAKKIAQIRDNSNFFRSELQKMGFEVLGDNDSPVMPFMVYNPA KMPAFSRECLKQNVAVVPVGFPATPLLLGRIRICISASHSREDLIKGLEVISNVGDLVGI KYLPVEQEETTSVEKPKKL

Transcript Sequence

Transcript ID	Os01t0928600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:40759332:40763911:-1 gene:Os01g0928600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine palmitoyltransferase. (Os01t0928600-01)
Sequence	TCATCTCACCATCCATCGATCACACATCAGCTAGCTCGATCACAAACACCGACGCTTCCG CCGCATTCCGGCCACCGGAGTCGAGGAAGAAGAGAGAGAGAGGTAGCTGATCGAGCTAAG CAATGGTGATCAAGGTGCCGTACGTGACGGCGGCGACGACGCTGTTCAGCTTCGGCCTCA TCTTCGGCTTCGGCCACCTCCGCGACTCCTTCCGCGCCCTTCTCCGCCTCCTCTTCTCCT CCGCCGCCGCCGCCGACTCGCCGGCCGGCTGCAACTCCAAAGGTTACGCGCCGATTTGCG TTGGGAAGGAGGATTTCTACATCCGCCGCTTCTTCCGCCGCGTCCAGGACTGTTTCGGGC GACCGATAGCCAGCAAGCCTGATGCGTGGTTCGATGTGGTTGAGCGCTACTCGACTGACA GCAACAAGACACTGCACTGCACCACGAAAACATCCAAGTGCCTGAACCTGGCATCCTTCA ACTACCTAGGTTTCGCTGCTGCTGATGAGTACTGCACACCTCGTGTCATCGAGTCTCTGA AGAAATACTCTGCTAGTACCTGCAGTTCCCGAGTCGATGGAGGCAACACTCAGCTGCACA TAGAACTCGAAGAGCTGGTTGCAAGATTCGTCAGGAAGCCTTCGGCTATTCTGCTTGCCA TGGGTTATGCCACCAACTCTGCCATCATTCCTGCCTTGATTGGGAAGGGTGGACTGATAA TCAGTGATTCACTGAACCATAACTCTATAGTCAGTGGAGCTAGAGCTTCAGGAGCTACGA TTCGGGTGTTCGAACACAACAATCCTGCTCACCTGGAAAAACTACTGAGAGAGCAGATTT CAGGTGGACAGCCTAGAACACACAGGGCATGGAAGAAGATCCTGGTGATTGTTGAGGGGA TATATAGCATGGAAGGGGAGCTATGCAAACTCCCTGAGATCATATCTGTCTGCAAGAAGT ACAAGGTTTACACATACATGGACGAGGCACACAGTATTGGAGCTGTTGGGAAAACAGGAA GAGGTGTGTGTGAGCTACTAGGAGTGGATCCGGCTGATGTTGACATCATGATGGGCACAC TCTCAAAGTCATTTGGATCGAGTGGAGGTTACATTGCAGCATCAAAAGAGATTATTCAGC ATCTCAAGCTTACATGTCCTTCACATATCTATGGCACATCCATGTCACCTCCTGCAGTCC AGCAGGTCATCTCTGCAATGAAGGTTATTCTTGGGGAGGATGGAACTGACAGAGGGGCCA AGAAGATTGCTCAGATTAGAGATAACAGCAATTTCTTCCGTTCAGAGCTTCAGAAAATGG GCTTTGAGGTTCTTGGAGATAATGACTCACCTGTCATGCCTTTCATGGTCTACAATCCTG CTAAAATGCCTGCATTCTCAAGAGAGTGCCTGAAGCAAAATGTTGCTGTTGTTCCGGTTG GATTTCCTGCTACACCACTACTTCTTGGCAGAATTAGGATATGCATTTCTGCTTCTCACT CAAGGGAAGATCTTATCAAAGGATTGGAGGTTATCAGCAACGTTGGTGATCTTGTTGGAA TCAAGTACTTACCAGTTGAGCAAGAGGAGACTACATCTGTTGAGAAACCAAAGAAGCTTT AGTGAACAATCTGCGTCTCTTGTGCTAGATCAAGCTCAATTCTTTCTGTTACACACCGAT ATACATTTTAGAACTTCCCCCTGTTACCACTCCTAAGTCTGAGAATAAGTATGTCTGAAA TCGTGTAAGTTCCCTTCCAAAATGTAATAATGGTTGCGTTTATCATGTGTAAAAAATAAC ATCTTTACTCATACCTGATGAGTTCAGTTTCTGTGACCAACTGATATACTGAGCGTCAGT AACATGCAAAAGCAGATGACTGAATCTGAAATCTCTCACCCTATCCTATGTATGGTTAAT AGTTC