Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0928400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:40744003:40750822:-1 gene:Os01g0928400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0928400-01)
Sequence

ATGGTGCCAGCTAGGAGCCGCCTGTTCCACCATGACAGCAGCAGCAGCAGCAAGAGGGGC
GGCGGCAACTCGTCGTCGTCCTGTACTCCCCAATACTGCATCGCCACCCAGCTCGACGCC
GCCGCCGCCGCCGCGCCGGCGCGTAGACGTCACCACCACCACCACCAGCTAGCCATGGCG
CCGCCCGAAGACGACGCGGCCGCCGGCACGAGCTCTCGTGGCGGCGGTGCAGGAGACGAC
GACGACGGCGACAAGGACTGGCTCCAGCTCGGCCTCGCCGCCGCGGCGCCGACCGCCACC
GCTCCGGCGGCGGCGGCGGCGCCGTCGTCGTCTACGCCCACGGCGCCGGAGCTGGACGTG
TTCGCCGCCAAGCAGTACAACGGGAGGCCGCCGCTGTTCCCGCTGCCGATCTTGAGGAGC
TACCACCACCACCACCACCACCAGTACGGCCACGGCGGCGGCCGGTGTCCGCCGCCGTCG
TTCTTCCCGTTCGCGCGGCCGTTGAGGAGCTCCGGCGATCTCCCCGGCGTGATGAGGGTC
ATCAGCCCGCCGCGAAGAGCGGCGGCTGCTGATGCTGCCGGCTTGTGGCTGACACTTCAG
GCATCCCCTGATCAATTTCGAGAGCCCATTTTGCCCCAGATACCAAAGAGCTACCTTAGA
ATCAAGGATAGCAACATGAAGGTGGAAGTGGTGATGAAGTACTTGGCCGGCAAGCTAGGA
CTCACACAATCTCATCTTCAGAGGGCAGCTTCTTCCTCCCTTCTTGCTGGTCAAAAATGT
CAGAGACAGCATCTGGTGCTCATCACTGCGACCAAGCTGCAGGGAAGACGACGACGGCGA
CGGCGAGGATGA

Peptide Sequence

PEP ID

Os01t0928400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:40744003:40750822:-1 gene:Os01g0928400 transcript:Os01t0928400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0928400-01)
Sequence

MVPARSRLFHHDSSSSSKRGGGNSSSSCTPQYCIATQLDAAAAAAPARRRHHHHHQLAMA
PPEDDAAAGTSSRGGGAGDDDDGDKDWLQLGLAAAAPTATAPAAAAAPSSSTPTAPELDV
FAAKQYNGRPPLFPLPILRSYHHHHHHQYGHGGGRCPPPSFFPFARPLRSSGDLPGVMRV
ISPPRRAAAADAAGLWLTLQASPDQFREPILPQIPKSYLRIKDSNMKVEVVMKYLAGKLG
LTQSHLQRAASSSLLAGQKCQRQHLVLITATKLQGRRRRRRRG

Transcript Sequence

Transcript ID

Os01t0928400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:40744003:40750822:-1 gene:Os01g0928400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0928400-01)
Sequence

CATCAGCTAGCTAGCTCTCCTCCTCTTCTCCTTGTCTCTTCTCCTTCGAGTTTGCTCCCC
TACAGGAGAGAAAAGGATTCATCACATCTCATCTCACAACCCCTTTCATCGATCTCTCCT
AGATTATCTCTCTCTCCAATTTGCTCCAATCTTTAATTTCCTGCCTTTGAAGCTATAGCT
ACAGCCATGGAGGATGTCTGTCTCATCCATGGCGTGTAGCTAGCTAGTTTCTTTCTTTGC
ACTTCTTGAGTTCTTGTTAATTACTAAAGGATTGCGGCCATGGATGGAGATGGTGGAGCT
CGTCGTGGTGTAATCGGATGAGTGCGTGAGAGACATGAGACGTGCATCTAGCTGCAGGAT
CGAGGTCAGCAGCAGCAGCAGGTTGTCGTTGTCGTCGTCGTCGCCGCCGCCGCCGCCGCC
GCCATGGTGCCAGCTAGGAGCCGCCTGTTCCACCATGACAGCAGCAGCAGCAGCAAGAGG
GGCGGCGGCAACTCGTCGTCGTCCTGTACTCCCCAATACTGCATCGCCACCCAGCTCGAC
GCCGCCGCCGCCGCCGCGCCGGCGCGTAGACGTCACCACCACCACCACCAGCTAGCCATG
GCGCCGCCCGAAGACGACGCGGCCGCCGGCACGAGCTCTCGTGGCGGCGGTGCAGGAGAC
GACGACGACGGCGACAAGGACTGGCTCCAGCTCGGCCTCGCCGCCGCGGCGCCGACCGCC
ACCGCTCCGGCGGCGGCGGCGGCGCCGTCGTCGTCTACGCCCACGGCGCCGGAGCTGGAC
GTGTTCGCCGCCAAGCAGTACAACGGGAGGCCGCCGCTGTTCCCGCTGCCGATCTTGAGG
AGCTACCACCACCACCACCACCACCAGTACGGCCACGGCGGCGGCCGGTGTCCGCCGCCG
TCGTTCTTCCCGTTCGCGCGGCCGTTGAGGAGCTCCGGCGATCTCCCCGGCGTGATGAGG
GTCATCAGCCCGCCGCGAAGAGCGGCGGCTGCTGATGCTGCCGGCTTGTGGCTGACACTT
CAGGCATCCCCTGATCAATTTCGAGAGCCCATTTTGCCCCAGATACCAAAGAGCTACCTT
AGAATCAAGGATAGCAACATGAAGGTGGAAGTGGTGATGAAGTACTTGGCCGGCAAGCTA
GGACTCACACAATCTCATCTTCAGAGGGCAGCTTCTTCCTCCCTTCTTGCTGGTCAAAAA
TGTCAGAGACAGCATCTGGTGCTCATCACTGCGACCAAGCTGCAGGGAAGACGACGACGG
CGACGGCGAGGATGATCTTGTTGAGCTGCACCGGCGATCGCCGGCGGCGGCGGCTACTAC
TGACCACGTCATGGCACTCGTTTACAGCACAAGTAGTTCCTGCCATTAATTAGCTAATAA
TAATGTCCATCCATCGATCTGTAATTAATCAACGAGTTCTTTCATTATTTCGTCCGACCC
CCAGCTGATCTGCATGCTGCTCTGGTTAATTAACTGGTGGCTTAGTCGTCACAGGATTAA
CCAACCAACCAATGGACACATTTGTTTTTCTTTTTGTTCGATCTAATTCCATGTTGATTT
GTTTGAAAG